RNA–Protein interactions for RNA: ENST00000618411.4

SRRT-217, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,893 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-217ENST00000618411 POLR3AO14802 1390 aaPredicted RBP19■□□□□ 0.63
SRRT-217ENST00000618411 CALD1Q05682 793 aaKnown RBP19■□□□□ 0.63
SRRT-217ENST00000618411 CARMIL2Q6F5E8 1435 aa19■□□□□ 0.63
SRRT-217ENST00000618411 ATP10BO94823 1461 aa18.99■□□□□ 0.63
SRRT-217ENST00000618411 MADDQ8WXG6 1647 aa18.99■□□□□ 0.63
SRRT-217ENST00000618411 OFD1O75665 1012 aa18.99■□□□□ 0.63
SRRT-217ENST00000618411 ZSCAN30Q86W11 494 aa18.99■□□□□ 0.63
SRRT-217ENST00000618411 WDR63Q8IWG1 891 aa18.99■□□□□ 0.63
SRRT-217ENST00000618411 TNNQ9UQP3 1299 aa18.99■□□□□ 0.63
SRRT-217ENST00000618411 STAC3Q96MF2 364 aa18.98■□□□□ 0.63
SRRT-217ENST00000618411 SAMD9LQ8IVG5 1584 aa18.98■□□□□ 0.63
SRRT-217ENST00000618411 RBM25P49756 843 aaKnown RBP18.98■□□□□ 0.63
SRRT-217ENST00000618411 MVPQ14764 893 aaKnown RBP18.98■□□□□ 0.63
SRRT-217ENST00000618411 PHF23Q9BUL5 403 aaPredicted RBP18.98■□□□□ 0.63
SRRT-217ENST00000618411 RAB3GAP1Q15042 981 aa18.97■□□□□ 0.63
SRRT-217ENST00000618411 MAST1Q9Y2H9 1570 aa18.97■□□□□ 0.63
SRRT-217ENST00000618411 SLC24A1O60721 1099 aa18.96■□□□□ 0.63
SRRT-217ENST00000618411 KDM5AP29375 1690 aaKnown RBP18.95■□□□□ 0.62
SRRT-217ENST00000618411 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.95■□□□□ 0.62
SRRT-217ENST00000618411 RUNDC1Q96C34 613 aa18.95■□□□□ 0.62
SRRT-217ENST00000618411 KANK1Q14678 1352 aa18.95■□□□□ 0.62
SRRT-217ENST00000618411 MAP7D2Q96T17 732 aa18.95■□□□□ 0.62
SRRT-217ENST00000618411 IFT140Q96RY7 1462 aa18.95■□□□□ 0.62
SRRT-217ENST00000618411 HDAC1Q13547 482 aaPredicted RBP18.95■□□□□ 0.62
SRRT-217ENST00000618411 ANP32BQ92688 251 aaKnown RBP18.94■□□□□ 0.62
SRRT-217ENST00000618411 IBTKQ9P2D0 1353 aaPredicted RBP18.93■□□□□ 0.62
SRRT-217ENST00000618411 NASPP49321 788 aaPredicted RBP18.93■□□□□ 0.62
SRRT-217ENST00000618411 BCL2L13Q9BXK5 485 aa18.92■□□□□ 0.62
SRRT-217ENST00000618411 CCDC27Q2M243 656 aa18.92■□□□□ 0.62
SRRT-217ENST00000618411 ZKSCAN2Q63HK3 967 aa18.92■□□□□ 0.62
SRRT-217ENST00000618411 CDC42BPBQ9Y5S2 1711 aa18.92■□□□□ 0.62
SRRT-217ENST00000618411 HSP90AB1P08238 724 aaKnown RBP18.91■□□□□ 0.62
SRRT-217ENST00000618411 TCP11L2Q8N4U5 519 aa18.91■□□□□ 0.62
SRRT-217ENST00000618411 MRC2Q9UBG0 1479 aa18.91■□□□□ 0.62
SRRT-217ENST00000618411 DUOX2Q9NRD8 1548 aa18.91■□□□□ 0.62
SRRT-217ENST00000618411 MSNP26038 577 aaKnown RBP18.91■□□□□ 0.62
SRRT-217ENST00000618411 NEUROD2Q15784 382 aa18.91■□□□□ 0.62
SRRT-217ENST00000618411 DZIP1LQ8IYY4 767 aaKnown RBP18.91■□□□□ 0.62
SRRT-217ENST00000618411 TTC37Q6PGP7 1564 aa18.91■□□□□ 0.62
SRRT-217ENST00000618411 PREX2Q70Z35 1606 aa18.91■□□□□ 0.62
SRRT-217ENST00000618411 IQSEC2Q5JU85 1478 aa18.91■□□□□ 0.62
SRRT-217ENST00000618411 CARD14Q9BXL6 1004 aa18.91■□□□□ 0.62
SRRT-217ENST00000618411 SHROOM2Q13796 1616 aa18.9■□□□□ 0.62
SRRT-217ENST00000618411 NCBP3Q53F19 620 aaKnown RBP18.9■□□□□ 0.62
SRRT-217ENST00000618411 CEP152O94986 1710 aa18.9■□□□□ 0.62
SRRT-217ENST00000618411 RIPK4P57078 832 aa18.9■□□□□ 0.62
SRRT-217ENST00000618411 HS1BP3Q53T59 392 aa18.9■□□□□ 0.62
SRRT-217ENST00000618411 FTSJ3Q8IY81 847 aaKnown RBP18.9■□□□□ 0.62
SRRT-217ENST00000618411 CLEC17AQ6ZS10 378 aa18.89■□□□□ 0.61
SRRT-217ENST00000618411 RRP7AQ9Y3A4 280 aaKnown RBP18.89■□□□□ 0.61
SRRT-217ENST00000618411 SPHKAPQ2M3C7 1700 aa18.88■□□□□ 0.61
SRRT-217ENST00000618411 GOLGA6L22H0YM25 854 aa18.88■□□□□ 0.61
SRRT-217ENST00000618411 JPH4Q96JJ6 628 aa18.88■□□□□ 0.61
SRRT-217ENST00000618411 PRDM4Q9UKN5 801 aa18.88■□□□□ 0.61
SRRT-217ENST00000618411 SHPRHQ149N8 1683 aa18.88■□□□□ 0.61
SRRT-217ENST00000618411 CT47B1P0C2W7 299 aaPredicted RBP18.87■□□□□ 0.61
SRRT-217ENST00000618411 KLHL40Q2TBA0 621 aa18.87■□□□□ 0.61
SRRT-217ENST00000618411 SYCP2Q9BX26 1530 aa18.87■□□□□ 0.61
SRRT-217ENST00000618411 DDX19BQ9UMR2 479 aa18.86■□□□□ 0.61
SRRT-217ENST00000618411 ERVK-7P63135 1459 aa18.85■□□□□ 0.61
SRRT-217ENST00000618411 KIAA1210Q9ULL0 1709 aa18.83■□□□□ 0.61
SRRT-217ENST00000618411 ZNF500O60304 480 aaPredicted RBP18.83■□□□□ 0.6
SRRT-217ENST00000618411 MTERF4Q7Z6M4 381 aaKnown RBP18.83■□□□□ 0.6
SRRT-217ENST00000618411 RBM10P98175 930 aaKnown RBP18.83■□□□□ 0.6
SRRT-217ENST00000618411 KIF2CQ99661 725 aa18.83■□□□□ 0.6
SRRT-217ENST00000618411 ARHGAP31Q2M1Z3 1444 aa18.82■□□□□ 0.6
SRRT-217ENST00000618411 K7ELQ4 463 aaPredicted RBP18.82■□□□□ 0.6
SRRT-217ENST00000618411 ZNF445P59923 1031 aa18.82■□□□□ 0.6
SRRT-217ENST00000618411 CHMP7Q8WUX9 453 aaPredicted RBP18.82■□□□□ 0.6
SRRT-217ENST00000618411 DDX49Q9Y6V7 483 aaKnown RBP18.82■□□□□ 0.6
SRRT-217ENST00000618411 NOL7Q9UMY1 257 aaKnown RBP18.82■□□□□ 0.6
SRRT-217ENST00000618411 NUCB1Q02818 461 aa18.81■□□□□ 0.6
SRRT-217ENST00000618411 MORC1Q86VD1 984 aa18.81■□□□□ 0.6
SRRT-217ENST00000618411 FAM13BQ9NYF5 915 aa18.8■□□□□ 0.6
SRRT-217ENST00000618411 R3HCC1Q9Y3T6 440 aaKnown RBP18.8■□□□□ 0.6
SRRT-217ENST00000618411 TRIM27P14373 513 aa18.8■□□□□ 0.6
SRRT-217ENST00000618411 TRPM2O94759 1503 aa18.79■□□□□ 0.6
SRRT-217ENST00000618411 SSFA2P28290 1259 aa18.79■□□□□ 0.6
SRRT-217ENST00000618411 BAG4O95429 457 aaKnown RBP18.79■□□□□ 0.6
SRRT-217ENST00000618411 BMP2KLQ5H9B9 411 aa18.79■□□□□ 0.6
SRRT-217ENST00000618411 PODXL2Q9NZ53 605 aa18.79■□□□□ 0.6
SRRT-217ENST00000618411 ITPRIPQ8IWB1 547 aa18.79■□□□□ 0.6
SRRT-217ENST00000618411 PDLIM2Q96JY6 352 aa18.79■□□□□ 0.6
SRRT-217ENST00000618411 SMC4Q9NTJ3 1288 aa18.79■□□□□ 0.6
SRRT-217ENST00000618411 ATF7IPQ6VMQ6 1270 aa18.78■□□□□ 0.6
SRRT-217ENST00000618411 ZBTB40Q9NUA8 1239 aa18.78■□□□□ 0.6
SRRT-217ENST00000618411 SMAP1Q8IYB5 467 aaPredicted RBP18.77■□□□□ 0.6
SRRT-217ENST00000618411 KIF16BQ96L93 1317 aa18.77■□□□□ 0.6
SRRT-217ENST00000618411 CD2BP2O95400 341 aaKnown RBP18.77■□□□□ 0.6
SRRT-217ENST00000618411 CSPP1Q1MSJ5 1256 aa18.77■□□□□ 0.6
SRRT-217ENST00000618411 ARHGAP5Q13017 1502 aa18.77■□□□□ 0.59
SRRT-217ENST00000618411 DYNC1I1O14576 645 aa18.76■□□□□ 0.59
SRRT-217ENST00000618411 MCM5P33992 734 aa18.76■□□□□ 0.59
SRRT-217ENST00000618411 CFAP53Q96M91 514 aa18.76■□□□□ 0.59
SRRT-217ENST00000618411 PTPRTO14522 1441 aa18.76■□□□□ 0.59
SRRT-217ENST00000618411 SBNO2Q9Y2G9 1366 aa18.75■□□□□ 0.59
SRRT-217ENST00000618411 UQCRHLA0A096LP55 91 aa18.75■□□□□ 0.59
SRRT-217ENST00000618411 UQCRHP07919 91 aa18.75■□□□□ 0.59
SRRT-217ENST00000618411 CHD1LQ86WJ1 897 aa18.75■□□□□ 0.59
SRRT-217ENST00000618411 FOXD4L1Q9NU39 408 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms