RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 ZHX1Q9UKY1 873 aaPredicted RBP8.32□□□□□ -1.08
LMO3-235ENST00000616247 CCDC173Q0VFZ6 552 aa8.32□□□□□ -1.08
LMO3-235ENST00000616247 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.32□□□□□ -1.08
LMO3-235ENST00000616247 UQCRHLA0A096LP55 91 aa8.31□□□□□ -1.08
LMO3-235ENST00000616247 APBB1O00213 710 aa8.31□□□□□ -1.08
LMO3-235ENST00000616247 UQCRHP07919 91 aa8.31□□□□□ -1.08
LMO3-235ENST00000616247 MVPQ14764 893 aaKnown RBP8.31□□□□□ -1.08
LMO3-235ENST00000616247 PRAG1Q86YV5 1406 aa8.31□□□□□ -1.08
LMO3-235ENST00000616247 SAMD9Q5K651 1589 aa8.31□□□□□ -1.08
LMO3-235ENST00000616247 GRIN2AQ12879 1464 aa8.31□□□□□ -1.08
LMO3-235ENST00000616247 PLCB2Q00722 1185 aa8.31□□□□□ -1.08
LMO3-235ENST00000616247 TRMT2AQ8IZ69 625 aaKnown RBP8.31□□□□□ -1.08
LMO3-235ENST00000616247 RUNDC1Q96C34 613 aa8.3□□□□□ -1.08
LMO3-235ENST00000616247 CFAP53Q96M91 514 aa8.3□□□□□ -1.08
LMO3-235ENST00000616247 C1orf115Q9H7X2 142 aa8.3□□□□□ -1.08
LMO3-235ENST00000616247 TROQ12816 1431 aaPredicted RBP8.3□□□□□ -1.08
LMO3-235ENST00000616247 EXOSC9Q06265 439 aaKnown RBP8.3□□□□□ -1.08
LMO3-235ENST00000616247 DNMT1P26358 1616 aaKnown RBP8.29□□□□□ -1.08
LMO3-235ENST00000616247 SYNJ2O15056 1496 aa8.29□□□□□ -1.08
LMO3-235ENST00000616247 POLR1AO95602 1720 aaPredicted RBP8.29□□□□□ -1.08
LMO3-235ENST00000616247 ELL2O00472 640 aaPredicted RBP8.29□□□□□ -1.08
LMO3-235ENST00000616247 MTHFSP49914 203 aa8.29□□□□□ -1.08
LMO3-235ENST00000616247 GPATCH8Q9UKJ3 1502 aaKnown RBP8.29□□□□□ -1.08
LMO3-235ENST00000616247 CEP170Q5SW79 1584 aa8.29□□□□□ -1.08
LMO3-235ENST00000616247 MAGI1Q96QZ7 1491 aaPredicted RBP8.29□□□□□ -1.08
LMO3-235ENST00000616247 COL17A1Q9UMD9 1497 aaPredicted RBP8.29□□□□□ -1.08
LMO3-235ENST00000616247 PRPF40AO75400 957 aaKnown RBP8.29□□□□□ -1.08
LMO3-235ENST00000616247 SAFB2Q14151 953 aaKnown RBP eCLIP8.29□□□□□ -1.08
LMO3-235ENST00000616247 ISY1Q9ULR0 285 aaKnown RBP8.29□□□□□ -1.08
LMO3-235ENST00000616247 CFAP70Q5T0N1 1121 aa8.28□□□□□ -1.08
LMO3-235ENST00000616247 NOL8Q76FK4 1167 aaKnown RBP8.28□□□□□ -1.08
LMO3-235ENST00000616247 RBM27Q9P2N5 1060 aaKnown RBP8.28□□□□□ -1.08
LMO3-235ENST00000616247 MAGI2Q86UL8 1455 aa8.28□□□□□ -1.08
LMO3-235ENST00000616247 OFD1O75665 1012 aa8.28□□□□□ -1.08
LMO3-235ENST00000616247 NOB1Q9ULX3 412 aaKnown RBP8.28□□□□□ -1.08
LMO3-235ENST00000616247 CD2BP2O95400 341 aaKnown RBP8.27□□□□□ -1.08
LMO3-235ENST00000616247 GAS2L2Q8NHY3 880 aa8.27□□□□□ -1.08
LMO3-235ENST00000616247 SLC12A5Q9H2X9 1139 aa8.27□□□□□ -1.08
LMO3-235ENST00000616247 DDX19BQ9UMR2 479 aa8.27□□□□□ -1.08
LMO3-235ENST00000616247 TRAK1Q9UPV9 953 aa8.27□□□□□ -1.08
LMO3-235ENST00000616247 PLB1Q6P1J6 1458 aa8.27□□□□□ -1.08
LMO3-235ENST00000616247 K7ELQ4 463 aaPredicted RBP8.27□□□□□ -1.09
LMO3-235ENST00000616247 TMEM57Q8N5G2 664 aa8.27□□□□□ -1.09
LMO3-235ENST00000616247 CARD14Q9BXL6 1004 aa8.27□□□□□ -1.09
LMO3-235ENST00000616247 NUP153P49790 1475 aaKnown RBP8.27□□□□□ -1.09
LMO3-235ENST00000616247 TRIM27P14373 513 aa8.27□□□□□ -1.09
LMO3-235ENST00000616247 RIPK4P57078 832 aa8.27□□□□□ -1.09
LMO3-235ENST00000616247 SSH1Q8WYL5 1049 aa8.27□□□□□ -1.09
LMO3-235ENST00000616247 CHAMP1Q96JM3 812 aa8.27□□□□□ -1.09
LMO3-235ENST00000616247 IQGAP2Q13576 1575 aa8.26□□□□□ -1.09
LMO3-235ENST00000616247 BAG4O95429 457 aaKnown RBP8.26□□□□□ -1.09
LMO3-235ENST00000616247 RAB3GAP1Q15042 981 aa8.26□□□□□ -1.09
LMO3-235ENST00000616247 JPH4Q96JJ6 628 aa8.26□□□□□ -1.09
LMO3-235ENST00000616247 PTMSP20962 102 aa8.26□□□□□ -1.09
LMO3-235ENST00000616247 TSC1Q92574 1164 aa8.26□□□□□ -1.09
LMO3-235ENST00000616247 ARHGEF12Q9NZN5 1544 aa8.26□□□□□ -1.09
LMO3-235ENST00000616247 FAM177BA6PVY3 158 aa8.25□□□□□ -1.09
LMO3-235ENST00000616247 CHD1O14646 1710 aa8.25□□□□□ -1.09
LMO3-235ENST00000616247 CIZ1Q9ULV3 898 aaPredicted RBP8.25□□□□□ -1.09
LMO3-235ENST00000616247 NINLQ9Y2I6 1382 aa8.25□□□□□ -1.09
LMO3-235ENST00000616247 SYCE3A1L190 88 aa8.25□□□□□ -1.09
LMO3-235ENST00000616247 PRIM1P49642 420 aaKnown RBP8.25□□□□□ -1.09
LMO3-235ENST00000616247 ATF7IPQ6VMQ6 1270 aa8.25□□□□□ -1.09
LMO3-235ENST00000616247 CHD1LQ86WJ1 897 aa8.25□□□□□ -1.09
LMO3-235ENST00000616247 SMC5Q8IY18 1101 aa8.25□□□□□ -1.09
LMO3-235ENST00000616247 ZNF692Q9BU19 519 aaPredicted RBP8.25□□□□□ -1.09
LMO3-235ENST00000616247 RBSNQ9H1K0 784 aa8.25□□□□□ -1.09
LMO3-235ENST00000616247 NGEFQ8N5V2 710 aa8.24□□□□□ -1.09
LMO3-235ENST00000616247 BCL11BQ9C0K0 894 aaPredicted RBP8.24□□□□□ -1.09
LMO3-235ENST00000616247 INSRP06213 1382 aa8.24□□□□□ -1.09
LMO3-235ENST00000616247 A2MP01023 1474 aa8.24□□□□□ -1.09
LMO3-235ENST00000616247 CBX1P83916 185 aa8.24□□□□□ -1.09
LMO3-235ENST00000616247 AAMPQ13685 434 aa8.24□□□□□ -1.09
LMO3-235ENST00000616247 ZSCAN23Q3MJ62 389 aa8.24□□□□□ -1.09
LMO3-235ENST00000616247 MAP7D2Q96T17 732 aa8.24□□□□□ -1.09
LMO3-235ENST00000616247 NLRP1Q9C000 1473 aa8.24□□□□□ -1.09
LMO3-235ENST00000616247 IPO8O15397 1037 aaKnown RBP8.24□□□□□ -1.09
LMO3-235ENST00000616247 KLHL40Q2TBA0 621 aa8.24□□□□□ -1.09
LMO3-235ENST00000616247 NUTM2DQ5VT03 806 aaPredicted RBP8.24□□□□□ -1.09
LMO3-235ENST00000616247 WDR63Q8IWG1 891 aa8.24□□□□□ -1.09
LMO3-235ENST00000616247 JARID2Q92833 1246 aaPredicted RBP8.24□□□□□ -1.09
LMO3-235ENST00000616247 NUP160Q12769 1436 aa8.23□□□□□ -1.09
LMO3-235ENST00000616247 PKP1Q13835 747 aa8.23□□□□□ -1.09
LMO3-235ENST00000616247 TBC1D9Q6ZT07 1266 aa8.23□□□□□ -1.09
LMO3-235ENST00000616247 CAPN15O75808 1086 aa8.23□□□□□ -1.09
LMO3-235ENST00000616247 ZNF830Q96NB3 372 aaPredicted RBP8.23□□□□□ -1.09
LMO3-235ENST00000616247 IGSF3O75054 1194 aa8.22□□□□□ -1.09
LMO3-235ENST00000616247 DISP1Q96F81 1524 aa8.22□□□□□ -1.09
LMO3-235ENST00000616247 SNX21Q969T3 373 aa8.22□□□□□ -1.09
LMO3-235ENST00000616247 PPP1R9BQ96SB3 815 aa8.22□□□□□ -1.09
LMO3-235ENST00000616247 ERCC6L2Q5T890 1561 aa8.22□□□□□ -1.09
LMO3-235ENST00000616247 DSG3P32926 999 aa8.22□□□□□ -1.09
LMO3-235ENST00000616247 TMEM132EQ6IEE7 984 aa8.22□□□□□ -1.09
LMO3-235ENST00000616247 ASXL1Q8IXJ9 1541 aa8.21□□□□□ -1.09
LMO3-235ENST00000616247 GPRASP1Q5JY77 1395 aa8.21□□□□□ -1.09
LMO3-235ENST00000616247 RBM25P49756 843 aaKnown RBP8.21□□□□□ -1.09
LMO3-235ENST00000616247 NUCB2P80303 420 aa8.21□□□□□ -1.09
LMO3-235ENST00000616247 CSPP1Q1MSJ5 1256 aa8.21□□□□□ -1.09
LMO3-235ENST00000616247 PIK3C2GO75747 1445 aa8.21□□□□□ -1.1
LMO3-235ENST00000616247 KIF16BQ96L93 1317 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms