RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-223ENST00000616179 HECW1Q76N89 1606 aa19.18■□□□□ 0.66
SYNRG-223ENST00000616179 CGNQ9P2M7 1197 aaKnown RBP19.18■□□□□ 0.66
SYNRG-223ENST00000616179 BCORL1Q5H9F3 1711 aa19.17■□□□□ 0.66
SYNRG-223ENST00000616179 ZKSCAN5Q9Y2L8 839 aa19.17■□□□□ 0.66
SYNRG-223ENST00000616179 CHMP3Q9Y3E7 222 aa19.17■□□□□ 0.66
SYNRG-223ENST00000616179 ZNF592Q92610 1267 aa19.17■□□□□ 0.66
SYNRG-223ENST00000616179 ATF7IPQ6VMQ6 1270 aa19.16■□□□□ 0.66
SYNRG-223ENST00000616179 NGEFQ8N5V2 710 aa19.16■□□□□ 0.66
SYNRG-223ENST00000616179 SPC24Q8NBT2 197 aa19.16■□□□□ 0.66
SYNRG-223ENST00000616179 CHAMP1Q96JM3 812 aa19.16■□□□□ 0.66
SYNRG-223ENST00000616179 BLMP54132 1417 aaPredicted RBP19.16■□□□□ 0.66
SYNRG-223ENST00000616179 ZMYM4Q5VZL5 1548 aa19.16■□□□□ 0.66
SYNRG-223ENST00000616179 TRIM27P14373 513 aa19.15■□□□□ 0.66
SYNRG-223ENST00000616179 SSH1Q8WYL5 1049 aa19.15■□□□□ 0.66
SYNRG-223ENST00000616179 GRIN2BQ13224 1484 aa19.15■□□□□ 0.66
SYNRG-223ENST00000616179 CDC45O75419 566 aa19.15■□□□□ 0.66
SYNRG-223ENST00000616179 SMC5Q8IY18 1101 aa19.15■□□□□ 0.66
SYNRG-223ENST00000616179 SMAP1Q8IYB5 467 aaPredicted RBP19.15■□□□□ 0.66
SYNRG-223ENST00000616179 TSPY26PQ9H489 355 aa19.15■□□□□ 0.66
SYNRG-223ENST00000616179 GAPVD1Q14C86 1478 aa19.14■□□□□ 0.66
SYNRG-223ENST00000616179 JARID2Q92833 1246 aaPredicted RBP19.14■□□□□ 0.65
SYNRG-223ENST00000616179 KIF3AQ9Y496 699 aa19.14■□□□□ 0.65
SYNRG-223ENST00000616179 GDPD2Q9HCC8 539 aa19.14■□□□□ 0.65
SYNRG-223ENST00000616179 C17orf53Q8N3J3 647 aaPredicted RBP19.13■□□□□ 0.65
SYNRG-223ENST00000616179 PDCL2Q8N4E4 241 aa19.13■□□□□ 0.65
SYNRG-223ENST00000616179 NINLQ9Y2I6 1382 aa19.13■□□□□ 0.65
SYNRG-223ENST00000616179 NOL7Q9UMY1 257 aaKnown RBP19.13■□□□□ 0.65
SYNRG-223ENST00000616179 PZPP20742 1482 aa19.13■□□□□ 0.65
SYNRG-223ENST00000616179 TBC1D9Q6ZT07 1266 aa19.12■□□□□ 0.65
SYNRG-223ENST00000616179 HMGN5P82970 282 aaKnown RBP19.12■□□□□ 0.65
SYNRG-223ENST00000616179 SLC12A5Q9H2X9 1139 aa19.12■□□□□ 0.65
SYNRG-223ENST00000616179 CD2BP2O95400 341 aaKnown RBP19.12■□□□□ 0.65
SYNRG-223ENST00000616179 CHMP4BQ9H444 224 aaKnown RBP19.12■□□□□ 0.65
SYNRG-223ENST00000616179 POLA1P09884 1462 aaPredicted RBP19.12■□□□□ 0.65
SYNRG-223ENST00000616179 NEK4P51957 841 aa19.11■□□□□ 0.65
SYNRG-223ENST00000616179 CCDC94Q9BW85 323 aaPredicted RBP19.11■□□□□ 0.65
SYNRG-223ENST00000616179 USP25Q9UHP3 1055 aa19.11■□□□□ 0.65
SYNRG-223ENST00000616179 CFAP70Q5T0N1 1121 aa19.11■□□□□ 0.65
SYNRG-223ENST00000616179 NUTM2DQ5VT03 806 aaPredicted RBP19.11■□□□□ 0.65
SYNRG-223ENST00000616179 TTC12Q9H892 705 aaPredicted RBP19.1■□□□□ 0.65
SYNRG-223ENST00000616179 UNC13AQ9UPW8 1703 aa19.1■□□□□ 0.65
SYNRG-223ENST00000616179 PHF14O94880 888 aa19.1■□□□□ 0.65
SYNRG-223ENST00000616179 RABEP1Q15276 862 aa19.1■□□□□ 0.65
SYNRG-223ENST00000616179 VGLL3A8MV65 326 aa19.1■□□□□ 0.65
SYNRG-223ENST00000616179 PPP1R9BQ96SB3 815 aa19.1■□□□□ 0.65
SYNRG-223ENST00000616179 TRIM6-TRIM34B2RNG4 842 aa19.09■□□□□ 0.65
SYNRG-223ENST00000616179 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.09■□□□□ 0.65
SYNRG-223ENST00000616179 SNX21Q969T3 373 aa19.09■□□□□ 0.65
SYNRG-223ENST00000616179 WDR63Q8IWG1 891 aa19.08■□□□□ 0.64
SYNRG-223ENST00000616179 PLCD3Q8N3E9 789 aa19.08■□□□□ 0.64
SYNRG-223ENST00000616179 ZNF521Q96K83 1311 aa19.08■□□□□ 0.64
SYNRG-223ENST00000616179 NPHP1O15259 732 aa19.07■□□□□ 0.64
SYNRG-223ENST00000616179 ZGPATQ8N5A5 531 aaKnown RBP19.07■□□□□ 0.64
SYNRG-223ENST00000616179 TRERF1Q96PN7 1200 aa19.07■□□□□ 0.64
SYNRG-223ENST00000616179 TCOF1Q13428 1488 aaKnown RBP19.07■□□□□ 0.64
SYNRG-223ENST00000616179 PRDM2Q13029 1718 aa19.07■□□□□ 0.64
SYNRG-223ENST00000616179 SRPK2P78362 688 aaKnown RBP19.07■□□□□ 0.64
SYNRG-223ENST00000616179 PKP1Q13835 747 aa19.07■□□□□ 0.64
SYNRG-223ENST00000616179 THOC2Q8NI27 1593 aaKnown RBP19.07■□□□□ 0.64
SYNRG-223ENST00000616179 MCCP23508 829 aa19.07■□□□□ 0.64
SYNRG-223ENST00000616179 MAGI3Q5TCQ9 1506 aa19.06■□□□□ 0.64
SYNRG-223ENST00000616179 ERICH4A6NGS2 130 aa19.06■□□□□ 0.64
SYNRG-223ENST00000616179 TNNT3P45378 269 aaPredicted RBP19.06■□□□□ 0.64
SYNRG-223ENST00000616179 RILPL2Q969X0 211 aa19.06■□□□□ 0.64
SYNRG-223ENST00000616179 IFT57Q9NWB7 429 aa19.06■□□□□ 0.64
SYNRG-223ENST00000616179 STK26Q9P289 416 aa19.06■□□□□ 0.64
SYNRG-223ENST00000616179 GOLGA6L4A6NEF3 574 aa19.05■□□□□ 0.64
SYNRG-223ENST00000616179 MBD3O95983 291 aa19.05■□□□□ 0.64
SYNRG-223ENST00000616179 C9orf84Q5VXU9 1444 aa19.05■□□□□ 0.64
SYNRG-223ENST00000616179 CCDC27Q2M243 656 aa19.05■□□□□ 0.64
SYNRG-223ENST00000616179 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.05■□□□□ 0.64
SYNRG-223ENST00000616179 INTS3Q68E01 1043 aaKnown RBP19.05■□□□□ 0.64
SYNRG-223ENST00000616179 DIAPH3Q9NSV4 1193 aa19.05■□□□□ 0.64
SYNRG-223ENST00000616179 LRSAM1Q6UWE0 723 aa19.03■□□□□ 0.64
SYNRG-223ENST00000616179 ANO2Q9NQ90 1003 aa19.03■□□□□ 0.64
SYNRG-223ENST00000616179 KDM5CP41229 1560 aa19.03■□□□□ 0.64
SYNRG-223ENST00000616179 FGD1P98174 961 aa19.03■□□□□ 0.64
SYNRG-223ENST00000616179 SLC4A10Q6U841 1118 aa19.03■□□□□ 0.64
SYNRG-223ENST00000616179 GOLGA6L6A8MZA4 724 aa19.02■□□□□ 0.64
SYNRG-223ENST00000616179 NOLC1Q14978 699 aaKnown RBP eCLIP19.02■□□□□ 0.64
SYNRG-223ENST00000616179 TRMT2AQ8IZ69 625 aaKnown RBP19.02■□□□□ 0.64
SYNRG-223ENST00000616179 PRDM4Q9UKN5 801 aa19.02■□□□□ 0.64
SYNRG-223ENST00000616179 REC8O95072 547 aa19.02■□□□□ 0.63
SYNRG-223ENST00000616179 RBM25P49756 843 aaKnown RBP19.02■□□□□ 0.63
SYNRG-223ENST00000616179 GGNBP2Q9H3C7 697 aa19.02■□□□□ 0.63
SYNRG-223ENST00000616179 CAMSAP2Q08AD1 1489 aa19.01■□□□□ 0.63
SYNRG-223ENST00000616179 FIBPO43427 364 aa19.01■□□□□ 0.63
SYNRG-223ENST00000616179 BMP2KLQ5H9B9 411 aa19.01■□□□□ 0.63
SYNRG-223ENST00000616179 NUCB1Q02818 461 aa19■□□□□ 0.63
SYNRG-223ENST00000616179 MCM5P33992 734 aa19■□□□□ 0.63
SYNRG-223ENST00000616179 HDAC1Q13547 482 aaPredicted RBP19■□□□□ 0.63
SYNRG-223ENST00000616179 HS1BP3Q53T59 392 aa19■□□□□ 0.63
SYNRG-223ENST00000616179 CFAP44Q96MT7 982 aa19■□□□□ 0.63
SYNRG-223ENST00000616179 TERF1P54274 439 aa19■□□□□ 0.63
SYNRG-223ENST00000616179 CWC22Q9HCG8 908 aaKnown RBP19■□□□□ 0.63
SYNRG-223ENST00000616179 U2AF2P26368 475 aaKnown RBP eCLIP18.99■□□□□ 0.63
SYNRG-223ENST00000616179 PRAG1Q86YV5 1406 aa18.99■□□□□ 0.63
SYNRG-223ENST00000616179 ZNF500O60304 480 aaPredicted RBP18.99■□□□□ 0.63
SYNRG-223ENST00000616179 ADCY5O95622 1261 aa18.99■□□□□ 0.63
SYNRG-223ENST00000616179 KIAA0586Q9BVV6 1533 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms