RNA–Protein interactions for RNA: ENST00000608624.5

LINC00343-212, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 774 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-212ENST00000608624 DIP2AQ14689 1571 aa13.12□□□□□ -0.31
LINC00343-212ENST00000608624 NWD1Q149M9 1564 aa13.12□□□□□ -0.31
LINC00343-212ENST00000608624 XRN1Q8IZH2 1706 aaKnown RBP13.11□□□□□ -0.31
LINC00343-212ENST00000608624 CHD2O14647 1828 aaKnown RBP13.1□□□□□ -0.31
LINC00343-212ENST00000608624 PRAG1Q86YV5 1406 aa13.1□□□□□ -0.31
LINC00343-212ENST00000608624 ADGRB1O14514 1584 aa13.09□□□□□ -0.31
LINC00343-212ENST00000608624 VGFO15240 615 aaPredicted RBP13.09□□□□□ -0.31
LINC00343-212ENST00000608624 CFAP70Q5T0N1 1121 aa13.09□□□□□ -0.31
LINC00343-212ENST00000608624 RBM33Q96EV2 1170 aaKnown RBP13.09□□□□□ -0.31
LINC00343-212ENST00000608624 XIRP1Q702N8 1843 aaKnown RBP13.09□□□□□ -0.31
LINC00343-212ENST00000608624 TMEM132EQ6IEE7 984 aa13.08□□□□□ -0.32
LINC00343-212ENST00000608624 FARP1Q9Y4F1 1045 aaPredicted RBP13.08□□□□□ -0.32
LINC00343-212ENST00000608624 CLCN6P51797 869 aa13.07□□□□□ -0.32
LINC00343-212ENST00000608624 HDGFP51858 240 aaKnown RBP13.07□□□□□ -0.32
LINC00343-212ENST00000608624 NBPF8Q3BBV2 869 aa13.07□□□□□ -0.32
LINC00343-212ENST00000608624 TBX22Q9Y458 520 aa13.07□□□□□ -0.32
LINC00343-212ENST00000608624 TONSLQ96HA7 1378 aa13.07□□□□□ -0.32
LINC00343-212ENST00000608624 LAMC1P11047 1609 aa13.06□□□□□ -0.32
LINC00343-212ENST00000608624 KCNA6P17658 529 aa13.06□□□□□ -0.32
LINC00343-212ENST00000608624 OTUD5Q96G74 571 aa13.06□□□□□ -0.32
LINC00343-212ENST00000608624 LRRC7Q96NW7 1537 aa13.06□□□□□ -0.32
LINC00343-212ENST00000608624 TRPM1Q7Z4N2 1603 aa13.06□□□□□ -0.32
LINC00343-212ENST00000608624 DCBLD2Q96PD2 775 aa13.05□□□□□ -0.32
LINC00343-212ENST00000608624 ROBO2Q9HCK4 1378 aa13.05□□□□□ -0.32
LINC00343-212ENST00000608624 NBPF1Q3BBV0 1214 aa13.04□□□□□ -0.32
LINC00343-212ENST00000608624 C14orf93Q9H972 538 aaKnown RBP13.04□□□□□ -0.32
LINC00343-212ENST00000608624 CLSPNQ9HAW4 1339 aa13.04□□□□□ -0.32
LINC00343-212ENST00000608624 NKTRP30414 1462 aaKnown RBP13.04□□□□□ -0.32
LINC00343-212ENST00000608624 AMOTL2Q9Y2J4 779 aa13.03□□□□□ -0.32
LINC00343-212ENST00000608624 PLEKHH1Q9ULM0 1364 aa13.03□□□□□ -0.32
LINC00343-212ENST00000608624 YTHDC2Q9H6S0 1430 aaKnown RBP13.03□□□□□ -0.32
LINC00343-212ENST00000608624 CPS1P31327 1500 aa13.03□□□□□ -0.32
LINC00343-212ENST00000608624 KNDC1Q76NI1 1749 aa13.02□□□□□ -0.32
LINC00343-212ENST00000608624 KIAA1210Q9ULL0 1709 aa13.02□□□□□ -0.32
LINC00343-212ENST00000608624 STK26Q9P289 416 aa13.02□□□□□ -0.33
LINC00343-212ENST00000608624 TMEM94Q12767 1356 aa13.02□□□□□ -0.33
LINC00343-212ENST00000608624 PIK3R4Q99570 1358 aa13.02□□□□□ -0.33
LINC00343-212ENST00000608624 LRPPRCP42704 1394 aaKnown RBP13.01□□□□□ -0.33
LINC00343-212ENST00000608624 NALCNQ8IZF0 1738 aa13.01□□□□□ -0.33
LINC00343-212ENST00000608624 ARHGEF28Q8N1W1 1705 aaKnown RBP13□□□□□ -0.33
LINC00343-212ENST00000608624 TECPR2O15040 1411 aa13□□□□□ -0.33
LINC00343-212ENST00000608624 PTCH1Q13635 1447 aa13□□□□□ -0.33
LINC00343-212ENST00000608624 POTEB2H3BUK9 544 aa13□□□□□ -0.33
LINC00343-212ENST00000608624 RALGAPBQ86X10 1494 aa12.99□□□□□ -0.33
LINC00343-212ENST00000608624 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.99□□□□□ -0.33
LINC00343-212ENST00000608624 WAPLQ7Z5K2 1190 aa12.98□□□□□ -0.33
LINC00343-212ENST00000608624 PROSER2Q86WR7 435 aaPredicted RBP12.98□□□□□ -0.33
LINC00343-212ENST00000608624 CERKQ8TCT0 537 aa12.98□□□□□ -0.33
LINC00343-212ENST00000608624 POTEMA6NI47 508 aa12.97□□□□□ -0.33
LINC00343-212ENST00000608624 ABCC11Q96J66 1382 aa12.96□□□□□ -0.33
LINC00343-212ENST00000608624 TRAK1Q9UPV9 953 aa12.96□□□□□ -0.33
LINC00343-212ENST00000608624 ROCK2O75116 1388 aaKnown RBP12.95□□□□□ -0.34
LINC00343-212ENST00000608624 DLC1Q96QB1 1528 aa12.95□□□□□ -0.34
LINC00343-212ENST00000608624 SAFB2Q14151 953 aaKnown RBP eCLIP12.95□□□□□ -0.34
LINC00343-212ENST00000608624 ZNF579Q8NAF0 562 aaKnown RBP12.95□□□□□ -0.34
LINC00343-212ENST00000608624 STAC3Q96MF2 364 aa12.95□□□□□ -0.34
LINC00343-212ENST00000608624 GPRASP1Q5JY77 1395 aa12.94□□□□□ -0.34
LINC00343-212ENST00000608624 PRAM1Q96QH2 718 aa12.94□□□□□ -0.34
LINC00343-212ENST00000608624 ADGRL3Q9HAR2 1447 aa12.94□□□□□ -0.34
LINC00343-212ENST00000608624 POTEGQ6S5H5 508 aa12.92□□□□□ -0.34
LINC00343-212ENST00000608624 IQSEC2Q5JU85 1478 aa12.91□□□□□ -0.34
LINC00343-212ENST00000608624 FAM135BQ49AJ0 1406 aa12.91□□□□□ -0.34
LINC00343-212ENST00000608624 QRICH2Q9H0J4 1663 aa12.91□□□□□ -0.34
LINC00343-212ENST00000608624 HIRIP3Q9BW71 556 aaPredicted RBP12.9□□□□□ -0.34
LINC00343-212ENST00000608624 CDC42BPGQ6DT37 1551 aa12.9□□□□□ -0.35
LINC00343-212ENST00000608624 C14orf37Q86TY3 774 aa12.89□□□□□ -0.35
LINC00343-212ENST00000608624 ADGRB2O60241 1585 aa12.89□□□□□ -0.35
LINC00343-212ENST00000608624 MINK1Q8N4C8 1332 aaPredicted RBP12.88□□□□□ -0.35
LINC00343-212ENST00000608624 GALR2O43603 387 aaPredicted RBP12.88□□□□□ -0.35
LINC00343-212ENST00000608624 CARD11Q9BXL7 1154 aa12.88□□□□□ -0.35
LINC00343-212ENST00000608624 TIMELESSQ9UNS1 1208 aa12.88□□□□□ -0.35
LINC00343-212ENST00000608624 MSH6P52701 1360 aa12.88□□□□□ -0.35
LINC00343-212ENST00000608624 FMN2Q9NZ56 1722 aa12.88□□□□□ -0.35
LINC00343-212ENST00000608624 USP32Q8NFA0 1604 aa12.88□□□□□ -0.35
LINC00343-212ENST00000608624 TULP4Q9NRJ4 1543 aa12.88□□□□□ -0.35
LINC00343-212ENST00000608624 MST1RQ04912 1400 aa12.88□□□□□ -0.35
LINC00343-212ENST00000608624 NCOA3Q9Y6Q9 1424 aa12.88□□□□□ -0.35
LINC00343-212ENST00000608624 UBAP1LF5GYI3 381 aa12.87□□□□□ -0.35
LINC00343-212ENST00000608624 ZRANB1Q9UGI0 708 aa12.87□□□□□ -0.35
LINC00343-212ENST00000608624 NUTM2FA1L443 756 aa12.86□□□□□ -0.35
LINC00343-212ENST00000608624 POGKQ9P215 609 aa12.86□□□□□ -0.35
LINC00343-212ENST00000608624 USP47Q96K76 1375 aa12.85□□□□□ -0.35
LINC00343-212ENST00000608624 C19orf44Q9H6X5 657 aa12.85□□□□□ -0.35
LINC00343-212ENST00000608624 ROBO1Q9Y6N7 1651 aa12.85□□□□□ -0.35
LINC00343-212ENST00000608624 DCCP43146 1447 aa12.85□□□□□ -0.35
LINC00343-212ENST00000608624 CENPJQ9HC77 1338 aaPredicted RBP12.85□□□□□ -0.35
LINC00343-212ENST00000608624 RGPD8O14715 1765 aaPredicted RBP12.84□□□□□ -0.35
LINC00343-212ENST00000608624 PIP4K2BP78356 416 aa12.84□□□□□ -0.35
LINC00343-212ENST00000608624 SIRT1Q96EB6 747 aa12.84□□□□□ -0.35
LINC00343-212ENST00000608624 C1orf167Q5SNV9 1468 aa12.84□□□□□ -0.35
LINC00343-212ENST00000608624 PRR36Q9H6K5 1346 aa12.83□□□□□ -0.36
LINC00343-212ENST00000608624 ATP7BP35670 1465 aa12.81□□□□□ -0.36
LINC00343-212ENST00000608624 ST20-MTHFSA0A0A6YYL1 179 aa12.81□□□□□ -0.36
LINC00343-212ENST00000608624 ATF3P18847 181 aa12.81□□□□□ -0.36
LINC00343-212ENST00000608624 DDX17Q92841 729 aaKnown RBP12.81□□□□□ -0.36
LINC00343-212ENST00000608624 TESK2Q96S53 571 aa12.81□□□□□ -0.36
LINC00343-212ENST00000608624 EIF3AQ14152 1382 aaKnown RBP12.81□□□□□ -0.36
LINC00343-212ENST00000608624 TOPAZ1Q8N9V7 1692 aa12.8□□□□□ -0.36
LINC00343-212ENST00000608624 ORAI2Q96SN7 254 aa12.8□□□□□ -0.36
LINC00343-212ENST00000608624 SLAIN2Q9P270 581 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms