RNA–Protein interactions for RNA: ENST00000606377.6

PAX6-231, Transcript of paired box 6, human

APPRIS P4 TSL 5 BASIC

Gene PAX6, Length 6,901 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-231	ENST00000606377	ERICH2	A1L162	156 aa		12.15	□□□□□ -0.46
PAX6-231	ENST00000606377	MTHFS	P49914	203 aa		12.15	□□□□□ -0.46
PAX6-231	ENST00000606377	RNF20	Q5VTR2	975 aa		12.15	□□□□□ -0.46
PAX6-231	ENST00000606377	LNPK	Q9C0E8	428 aa		12.15	□□□□□ -0.46
PAX6-231	ENST00000606377	RRBP1	Q9P2E9	1410 aa	Known RBP	12.15	□□□□□ -0.46
PAX6-231	ENST00000606377	PANK1	Q8TE04	598 aa		12.15	□□□□□ -0.46
PAX6-231	ENST00000606377	WWC1	Q8IX03	1113 aa		12.15	□□□□□ -0.46
PAX6-231	ENST00000606377	GOLGA6L1	Q8N7Z2	621 aa		12.15	□□□□□ -0.47
PAX6-231	ENST00000606377	CCDC27	Q2M243	656 aa		12.14	□□□□□ -0.47
PAX6-231	ENST00000606377	PRAM1	Q96QH2	718 aa		12.14	□□□□□ -0.47
PAX6-231	ENST00000606377	FAM177B	A6PVY3	158 aa		12.14	□□□□□ -0.47
PAX6-231	ENST00000606377	ERC2	O15083	957 aa		12.14	□□□□□ -0.47
PAX6-231	ENST00000606377	UBTFL1	P0CB47	393 aa	Predicted RBP	12.14	□□□□□ -0.47
PAX6-231	ENST00000606377	HSP90AB4P	Q58FF6	505 aa		12.14	□□□□□ -0.47
PAX6-231	ENST00000606377	INTS3	Q68E01	1043 aa	Known RBP	12.14	□□□□□ -0.47
PAX6-231	ENST00000606377	CNTLN	Q9NXG0	1405 aa		12.14	□□□□□ -0.47
PAX6-231	ENST00000606377	PROSER2	Q86WR7	435 aa	Predicted RBP	12.14	□□□□□ -0.47
PAX6-231	ENST00000606377	WASHC4	Q2M389	1173 aa		12.13	□□□□□ -0.47
PAX6-231	ENST00000606377	NCAPD3	P42695	1498 aa		12.13	□□□□□ -0.47
PAX6-231	ENST00000606377	STRN4	Q9NRL3	753 aa		12.13	□□□□□ -0.47
PAX6-231	ENST00000606377	PCMTD1	Q96MG8	357 aa	Predicted RBP	12.13	□□□□□ -0.47
PAX6-231	ENST00000606377	ADAMTS8	Q9UP79	889 aa		12.13	□□□□□ -0.47
PAX6-231	ENST00000606377	SKOR2	Q2VWA4	1001 aa	Predicted RBP	12.12	□□□□□ -0.47
PAX6-231	ENST00000606377	TPM1	P09493	284 aa		12.12	□□□□□ -0.47
PAX6-231	ENST00000606377	RBM42	Q9BTD8	480 aa	Known RBP	12.12	□□□□□ -0.47
PAX6-231	ENST00000606377	NES	P48681	1621 aa		12.12	□□□□□ -0.47
PAX6-231	ENST00000606377	VPS37C	A5D8V6	355 aa	Predicted RBP	12.11	□□□□□ -0.47
PAX6-231	ENST00000606377	CWC22	Q9HCG8	908 aa	Known RBP	12.11	□□□□□ -0.47
PAX6-231	ENST00000606377	CFTR	P13569	1480 aa		12.11	□□□□□ -0.47
PAX6-231	ENST00000606377	CCAR2	Q8N163	923 aa	Known RBP	12.11	□□□□□ -0.47
PAX6-231	ENST00000606377	BICD2	Q8TD16	824 aa		12.11	□□□□□ -0.47
PAX6-231	ENST00000606377	DCAF8L1	A6NGE4	600 aa		12.1	□□□□□ -0.47
PAX6-231	ENST00000606377	SMC3	Q9UQE7	1217 aa		12.1	□□□□□ -0.47
PAX6-231	ENST00000606377	CCDC30	Q5VVM6	783 aa		12.1	□□□□□ -0.47
PAX6-231	ENST00000606377	MRC2	Q9UBG0	1479 aa		12.1	□□□□□ -0.47
PAX6-231	ENST00000606377	PRKAR2B	P31323	418 aa		12.1	□□□□□ -0.47
PAX6-231	ENST00000606377	PLEKHO1	Q53GL0	409 aa	Predicted RBP	12.1	□□□□□ -0.47
PAX6-231	ENST00000606377	KIF6	Q6ZMV9	814 aa		12.1	□□□□□ -0.47
PAX6-231	ENST00000606377	GAS2L2	Q8NHY3	880 aa		12.1	□□□□□ -0.47
PAX6-231	ENST00000606377	CCDC47	Q96A33	483 aa	Known RBP	12.1	□□□□□ -0.47
PAX6-231	ENST00000606377	CDK19	Q9BWU1	502 aa		12.09	□□□□□ -0.47
PAX6-231	ENST00000606377	MTMR7	Q9Y216	660 aa		12.09	□□□□□ -0.47
PAX6-231	ENST00000606377	KDM4A	O75164	1064 aa		12.09	□□□□□ -0.47
PAX6-231	ENST00000606377	SMG6	Q86US8	1419 aa	Known RBP	12.09	□□□□□ -0.47
PAX6-231	ENST00000606377	RALYL	Q86SE5	291 aa	Known RBP	12.09	□□□□□ -0.47
PAX6-231	ENST00000606377	TCP11L2	Q8N4U5	519 aa		12.09	□□□□□ -0.47
PAX6-231	ENST00000606377	NBPF1	Q3BBV0	1214 aa		12.09	□□□□□ -0.47
PAX6-231	ENST00000606377	WASHC2A	Q641Q2	1341 aa		12.09	□□□□□ -0.47
PAX6-231	ENST00000606377	PPP2R1A	P30153	589 aa		12.08	□□□□□ -0.48
PAX6-231	ENST00000606377	C9orf84	Q5VXU9	1444 aa		12.08	□□□□□ -0.48
PAX6-231	ENST00000606377	SCAPER	Q9BY12	1400 aa		12.08	□□□□□ -0.48
PAX6-231	ENST00000606377	ZNF428	Q96B54	188 aa		12.07	□□□□□ -0.48
PAX6-231	ENST00000606377	HOOK1	Q9UJC3	728 aa	Known RBP	12.07	□□□□□ -0.48
PAX6-231	ENST00000606377	NUTM2B	A6NNL0	878 aa	Predicted RBP	12.07	□□□□□ -0.48
PAX6-231	ENST00000606377	NUTM2E	B1AL46	878 aa	Predicted RBP	12.07	□□□□□ -0.48
PAX6-231	ENST00000606377	NUTM2A	Q8IVF1	878 aa	Predicted RBP	12.07	□□□□□ -0.48
PAX6-231	ENST00000606377	CCDC43	Q96MW1	224 aa	Known RBP	12.07	□□□□□ -0.48
PAX6-231	ENST00000606377	NINL	Q9Y2I6	1382 aa		12.07	□□□□□ -0.48
PAX6-231	ENST00000606377	DNAJC2	Q99543	621 aa	Known RBP	12.07	□□□□□ -0.48
PAX6-231	ENST00000606377	BRD4	O60885	1362 aa	Predicted RBP	12.07	□□□□□ -0.48
PAX6-231	ENST00000606377	SYNJ1	O43426	1573 aa		12.07	□□□□□ -0.48
PAX6-231	ENST00000606377	CNTROB	Q8N137	903 aa		12.07	□□□□□ -0.48
PAX6-231	ENST00000606377	FSD1	Q9BTV5	496 aa		12.07	□□□□□ -0.48
PAX6-231	ENST00000606377	SAFB	Q15424	915 aa	Known RBP eCLIP	12.06	□□□□□ -0.48
PAX6-231	ENST00000606377	THEMIS	Q8N1K5	641 aa	Predicted RBP	12.06	□□□□□ -0.48
PAX6-231	ENST00000606377	KRI1	Q8N9T8	703 aa	Known RBP	12.06	□□□□□ -0.48
PAX6-231	ENST00000606377	ZNF592	Q92610	1267 aa		12.06	□□□□□ -0.48
PAX6-231	ENST00000606377	C22orf23	Q9BZE7	217 aa		12.06	□□□□□ -0.48
PAX6-231	ENST00000606377	CABP1	Q9NZU7	370 aa		12.06	□□□□□ -0.48
PAX6-231	ENST00000606377	TAT	P17735	454 aa	Predicted RBP	12.06	□□□□□ -0.48
PAX6-231	ENST00000606377	CDCA7L	Q96GN5	454 aa		12.06	□□□□□ -0.48
PAX6-231	ENST00000606377	SURF6	O75683	361 aa	Known RBP	12.06	□□□□□ -0.48
PAX6-231	ENST00000606377	ANKRD20A12P	Q8NF67	263 aa		12.06	□□□□□ -0.48
PAX6-231	ENST00000606377	EXOSC9	Q06265	439 aa	Known RBP	12.06	□□□□□ -0.48
PAX6-231	ENST00000606377	SLC12A5	Q9H2X9	1139 aa		12.06	□□□□□ -0.48
PAX6-231	ENST00000606377	C1orf115	Q9H7X2	142 aa		12.06	□□□□□ -0.48
PAX6-231	ENST00000606377	ARAP1	Q96P48	1450 aa		12.06	□□□□□ -0.48
PAX6-231	ENST00000606377	IFT140	Q96RY7	1462 aa		12.05	□□□□□ -0.48
PAX6-231	ENST00000606377	CDC45	O75419	566 aa		12.05	□□□□□ -0.48
PAX6-231	ENST00000606377	SNAPC4	Q5SXM2	1469 aa		12.05	□□□□□ -0.48
PAX6-231	ENST00000606377	GSE1	Q14687	1217 aa		12.05	□□□□□ -0.48
PAX6-231	ENST00000606377	DDX54	Q8TDD1	881 aa	Known RBP	12.05	□□□□□ -0.48
PAX6-231	ENST00000606377	CHMP5	Q9NZZ3	219 aa		12.05	□□□□□ -0.48
PAX6-231	ENST00000606377	EHBP1L1	Q8N3D4	1523 aa		12.05	□□□□□ -0.48
PAX6-231	ENST00000606377	TWISTNB	Q3B726	338 aa	Predicted RBP	12.04	□□□□□ -0.48
PAX6-231	ENST00000606377	SULT6B1	Q6IMI4	303 aa		12.04	□□□□□ -0.48
PAX6-231	ENST00000606377	CC2D2A	Q9P2K1	1620 aa		12.04	□□□□□ -0.48
PAX6-231	ENST00000606377	ERICH3	Q5RHP9	1530 aa		12.04	□□□□□ -0.48
PAX6-231	ENST00000606377	RAPGEF3	O95398	923 aa		12.04	□□□□□ -0.48
PAX6-231	ENST00000606377	CABP4	P57796	275 aa		12.04	□□□□□ -0.48
PAX6-231	ENST00000606377	TOM1L2	Q6ZVM7	507 aa		12.04	□□□□□ -0.48
PAX6-231	ENST00000606377	GNAI3	P08754	354 aa		12.04	□□□□□ -0.48
PAX6-231	ENST00000606377	CLASRP	Q8N2M8	674 aa	Known RBP	12.04	□□□□□ -0.48
PAX6-231	ENST00000606377	TBC1D2B	Q9UPU7	963 aa		12.04	□□□□□ -0.48
PAX6-231	ENST00000606377	IK	Q13123	557 aa	Predicted RBP	12.03	□□□□□ -0.48
PAX6-231	ENST00000606377	SASS6	Q6UVJ0	657 aa		12.03	□□□□□ -0.48
PAX6-231	ENST00000606377	TSR2	Q969E8	191 aa	Known RBP	12.03	□□□□□ -0.48
PAX6-231	ENST00000606377	NOB1	Q9ULX3	412 aa	Known RBP	12.03	□□□□□ -0.48
PAX6-231	ENST00000606377	HECW1	Q76N89	1606 aa		12.03	□□□□□ -0.48
PAX6-231	ENST00000606377	IPO7	O95373	1038 aa	Known RBP	12.02	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms