RNA–Protein interactions for RNA: ENST00000604926.1

COL4A3BP-207, Transcript of collagen type IV alpha 3 binding protein, humanhuman

Gene COL4A3BP, Length 3,355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-207ENST00000604926 DEPDC5O75140 1603 aa7.45□□□□□ -1.22
COL4A3BP-207ENST00000604926 LAMC1P11047 1609 aa7.45□□□□□ -1.22
COL4A3BP-207ENST00000604926 GOLIM4O00461 696 aa7.45□□□□□ -1.22
COL4A3BP-207ENST00000604926 PPP4R3BQ5MIZ7 849 aa7.44□□□□□ -1.22
COL4A3BP-207ENST00000604926 DDX46Q7L014 1031 aaKnown RBP7.44□□□□□ -1.22
COL4A3BP-207ENST00000604926 PDCL3Q9H2J4 239 aa7.44□□□□□ -1.22
COL4A3BP-207ENST00000604926 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.44□□□□□ -1.22
COL4A3BP-207ENST00000604926 LONRF3Q496Y0 759 aa7.44□□□□□ -1.22
COL4A3BP-207ENST00000604926 CCDC184Q52MB2 194 aa7.44□□□□□ -1.22
COL4A3BP-207ENST00000604926 DIEXFQ68CQ4 756 aaKnown RBP7.44□□□□□ -1.22
COL4A3BP-207ENST00000604926 CLUAP1Q96AJ1 413 aa7.44□□□□□ -1.22
COL4A3BP-207ENST00000604926 IGSF5Q9NSI5 407 aa7.44□□□□□ -1.22
COL4A3BP-207ENST00000604926 COL17A1Q9UMD9 1497 aaPredicted RBP7.44□□□□□ -1.22
COL4A3BP-207ENST00000604926 PPP4R3CPQ6ZMV5 832 aa7.43□□□□□ -1.22
COL4A3BP-207ENST00000604926 EP400NLQ6ZTU2 488 aa7.43□□□□□ -1.22
COL4A3BP-207ENST00000604926 ANP32CO43423 234 aa7.43□□□□□ -1.22
COL4A3BP-207ENST00000604926 CT47B1P0C2W7 299 aaPredicted RBP7.43□□□□□ -1.22
COL4A3BP-207ENST00000604926 MAP2K1Q02750 393 aaPredicted RBP7.43□□□□□ -1.22
COL4A3BP-207ENST00000604926 HIRIP3Q9BW71 556 aaPredicted RBP7.43□□□□□ -1.22
COL4A3BP-207ENST00000604926 ZFYVE27Q5T4F4 411 aa7.42□□□□□ -1.22
COL4A3BP-207ENST00000604926 VTI1AQ96AJ9 217 aa7.42□□□□□ -1.22
COL4A3BP-207ENST00000604926 EFCAB5A4FU69 1503 aa7.42□□□□□ -1.22
COL4A3BP-207ENST00000604926 POLR1AO95602 1720 aaPredicted RBP7.42□□□□□ -1.22
COL4A3BP-207ENST00000604926 RNF217Q8TC41 542 aa7.42□□□□□ -1.22
COL4A3BP-207ENST00000604926 BORCS6Q96GS4 357 aa7.42□□□□□ -1.22
COL4A3BP-207ENST00000604926 KLHL42Q9P2K6 505 aa7.42□□□□□ -1.22
COL4A3BP-207ENST00000604926 WASHC2CQ9Y4E1 1318 aa7.42□□□□□ -1.22
COL4A3BP-207ENST00000604926 ITSN2Q9NZM3 1697 aa7.42□□□□□ -1.22
COL4A3BP-207ENST00000604926 PTPN23Q9H3S7 1636 aa7.41□□□□□ -1.22
COL4A3BP-207ENST00000604926 SOCS7O14512 581 aa7.41□□□□□ -1.22
COL4A3BP-207ENST00000604926 MAMSTRQ6ZN01 415 aa7.41□□□□□ -1.22
COL4A3BP-207ENST00000604926 BANK1Q8NDB2 785 aa7.41□□□□□ -1.22
COL4A3BP-207ENST00000604926 WDR70Q9NW82 654 aa7.41□□□□□ -1.22
COL4A3BP-207ENST00000604926 HDAC1Q13547 482 aaPredicted RBP7.41□□□□□ -1.22
COL4A3BP-207ENST00000604926 NBPF10Q6P3W6 841 aaKnown RBP7.41□□□□□ -1.22
COL4A3BP-207ENST00000604926 NRDCO43847 1150 aa7.4□□□□□ -1.22
COL4A3BP-207ENST00000604926 ERCC3P19447 782 aa7.4□□□□□ -1.22
COL4A3BP-207ENST00000604926 NBPF6Q5VWK0 638 aa7.4□□□□□ -1.22
COL4A3BP-207ENST00000604926 NBPF5PQ86XG9 351 aaPredicted RBP7.4□□□□□ -1.22
COL4A3BP-207ENST00000604926 PROCA1Q8NCQ7 364 aaPredicted RBP7.4□□□□□ -1.22
COL4A3BP-207ENST00000604926 NBPF4Q96M43 638 aa7.4□□□□□ -1.22
COL4A3BP-207ENST00000604926 PLXNC1O60486 1568 aa7.4□□□□□ -1.22
COL4A3BP-207ENST00000604926 ZKSCAN2Q63HK3 967 aa7.4□□□□□ -1.23
COL4A3BP-207ENST00000604926 PLA2R1Q13018 1463 aa7.39□□□□□ -1.23
COL4A3BP-207ENST00000604926 VASPP50552 380 aaPredicted RBP7.39□□□□□ -1.23
COL4A3BP-207ENST00000604926 MTA1Q13330 715 aa7.39□□□□□ -1.23
COL4A3BP-207ENST00000604926 ANKRD23Q86SG2 305 aa7.39□□□□□ -1.23
COL4A3BP-207ENST00000604926 SMAP1Q8IYB5 467 aaPredicted RBP7.39□□□□□ -1.23
COL4A3BP-207ENST00000604926 DDRGK1Q96HY6 314 aa7.39□□□□□ -1.23
COL4A3BP-207ENST00000604926 DISP1Q96F81 1524 aa7.39□□□□□ -1.23
COL4A3BP-207ENST00000604926 CXorf38Q8TB03 319 aa7.39□□□□□ -1.23
COL4A3BP-207ENST00000604926 PIK3R5Q8WYR1 880 aa7.39□□□□□ -1.23
COL4A3BP-207ENST00000604926 GEMIN8Q9NWZ8 242 aaKnown RBP7.39□□□□□ -1.23
COL4A3BP-207ENST00000604926 LRP5O75197 1615 aa7.39□□□□□ -1.23
COL4A3BP-207ENST00000604926 SOGA1O94964 1423 aa7.39□□□□□ -1.23
COL4A3BP-207ENST00000604926 GIMAP6Q6P9H5 292 aa7.39□□□□□ -1.23
COL4A3BP-207ENST00000604926 MSL3Q8N5Y2 521 aaKnown RBP7.39□□□□□ -1.23
COL4A3BP-207ENST00000604926 ZC3H15Q8WU90 426 aaKnown RBP7.39□□□□□ -1.23
COL4A3BP-207ENST00000604926 EIF2AK4Q9P2K8 1649 aaKnown RBP7.38□□□□□ -1.23
COL4A3BP-207ENST00000604926 RPGRIP1LQ68CZ1 1315 aa7.38□□□□□ -1.23
COL4A3BP-207ENST00000604926 CREB3O43889 395 aa7.38□□□□□ -1.23
COL4A3BP-207ENST00000604926 ILDR1Q86SU0 546 aaPredicted RBP7.38□□□□□ -1.23
COL4A3BP-207ENST00000604926 SH3BP5O60239 455 aa7.38□□□□□ -1.23
COL4A3BP-207ENST00000604926 ECM2O94769 699 aaPredicted RBP7.38□□□□□ -1.23
COL4A3BP-207ENST00000604926 CSPP1Q1MSJ5 1256 aa7.38□□□□□ -1.23
COL4A3BP-207ENST00000604926 BARGINQ6ZT62 677 aa7.38□□□□□ -1.23
COL4A3BP-207ENST00000604926 PPP1R1BQ9UD71 204 aaPredicted RBP7.38□□□□□ -1.23
COL4A3BP-207ENST00000604926 NUB1Q9Y5A7 615 aa7.38□□□□□ -1.23
COL4A3BP-207ENST00000604926 TAF3Q5VWG9 929 aa7.37□□□□□ -1.23
COL4A3BP-207ENST00000604926 ADGBQ8N7X0 1667 aa7.37□□□□□ -1.23
COL4A3BP-207ENST00000604926 KDM4FA0A1W2PPD8 638 aa7.37□□□□□ -1.23
COL4A3BP-207ENST00000604926 SSR1P43307 286 aaKnown RBP7.37□□□□□ -1.23
COL4A3BP-207ENST00000604926 FRMD4BQ9Y2L6 1034 aa7.37□□□□□ -1.23
COL4A3BP-207ENST00000604926 UTP14CQ5TAP6 766 aaKnown RBP7.36□□□□□ -1.23
COL4A3BP-207ENST00000604926 IPO8O15397 1037 aaKnown RBP7.36□□□□□ -1.23
COL4A3BP-207ENST00000604926 CHGAP10645 457 aaKnown RBP7.36□□□□□ -1.23
COL4A3BP-207ENST00000604926 CLEC4GQ6UXB4 293 aa7.36□□□□□ -1.23
COL4A3BP-207ENST00000604926 KCNV2Q8TDN2 545 aa7.36□□□□□ -1.23
COL4A3BP-207ENST00000604926 MORC4Q8TE76 937 aa7.36□□□□□ -1.23
COL4A3BP-207ENST00000604926 TMX4Q9H1E5 349 aaPredicted RBP7.36□□□□□ -1.23
COL4A3BP-207ENST00000604926 MYO5CQ9NQX4 1742 aa7.36□□□□□ -1.23
COL4A3BP-207ENST00000604926 KIF21BO75037 1637 aa7.36□□□□□ -1.23
COL4A3BP-207ENST00000604926 SETDB1Q15047 1291 aa7.36□□□□□ -1.23
COL4A3BP-207ENST00000604926 YY1AP1Q9H869 796 aa7.36□□□□□ -1.23
COL4A3BP-207ENST00000604926 PMM1Q92871 262 aa7.35□□□□□ -1.23
COL4A3BP-207ENST00000604926 RAI14Q9P0K7 980 aa7.35□□□□□ -1.23
COL4A3BP-207ENST00000604926 CALRP27797 417 aaKnown RBP7.35□□□□□ -1.23
COL4A3BP-207ENST00000604926 APLP1P51693 650 aa7.35□□□□□ -1.23
COL4A3BP-207ENST00000604926 CCDC97Q96F63 343 aaPredicted RBP7.35□□□□□ -1.23
COL4A3BP-207ENST00000604926 MRVI1Q9Y6F6 885 aa7.35□□□□□ -1.23
COL4A3BP-207ENST00000604926 GOLGA3Q08378 1498 aa7.35□□□□□ -1.23
COL4A3BP-207ENST00000604926 FHOD3Q2V2M9 1422 aa7.34□□□□□ -1.23
COL4A3BP-207ENST00000604926 SATB1Q01826 763 aa7.34□□□□□ -1.23
COL4A3BP-207ENST00000604926 LMOD3Q0VAK6 560 aa7.34□□□□□ -1.23
COL4A3BP-207ENST00000604926 GPATCH3Q96I76 525 aa7.34□□□□□ -1.23
COL4A3BP-207ENST00000604926 WRNQ14191 1432 aaPredicted RBP eCLIP7.34□□□□□ -1.23
COL4A3BP-207ENST00000604926 CPS1P31327 1500 aa7.34□□□□□ -1.23
COL4A3BP-207ENST00000604926 ZKSCAN8Q15776 578 aaPredicted RBP7.34□□□□□ -1.23
COL4A3BP-207ENST00000604926 HS6ST3Q8IZP7 471 aa7.34□□□□□ -1.23
COL4A3BP-207ENST00000604926 WASHC2AQ641Q2 1341 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms