RNA–Protein interactions for RNA: ENST00000602848.5

PPFIA3-211, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-211ENST00000602848 METP08581 1390 aa30.28■■■□□ 2.44
PPFIA3-211ENST00000602848 BCANQ96GW7 911 aa30.28■■■□□ 2.44
PPFIA3-211ENST00000602848 MED14O60244 1454 aa30.28■■■□□ 2.44
PPFIA3-211ENST00000602848 NINLQ9Y2I6 1382 aa30.27■■■□□ 2.44
PPFIA3-211ENST00000602848 FAM135BQ49AJ0 1406 aa30.27■■■□□ 2.44
PPFIA3-211ENST00000602848 BRD4O60885 1362 aaPredicted RBP30.27■■■□□ 2.44
PPFIA3-211ENST00000602848 SENP3Q9H4L4 574 aaPredicted RBP30.26■■■□□ 2.44
PPFIA3-211ENST00000602848 CCDC184Q52MB2 194 aa30.24■■■□□ 2.43
PPFIA3-211ENST00000602848 TBX22Q9Y458 520 aa30.24■■■□□ 2.43
PPFIA3-211ENST00000602848 DIP2AQ14689 1571 aa30.23■■■□□ 2.43
PPFIA3-211ENST00000602848 AMER1Q5JTC6 1135 aaPredicted RBP30.22■■■□□ 2.43
PPFIA3-211ENST00000602848 NLRP13Q86W25 1043 aa30.22■■■□□ 2.43
PPFIA3-211ENST00000602848 ATAD2Q6PL18 1390 aa30.22■■■□□ 2.43
PPFIA3-211ENST00000602848 CPS1P31327 1500 aa30.21■■■□□ 2.43
PPFIA3-211ENST00000602848 SAFB2Q14151 953 aaKnown RBP eCLIP30.19■■■□□ 2.42
PPFIA3-211ENST00000602848 TMC1Q8TDI8 760 aa30.19■■■□□ 2.42
PPFIA3-211ENST00000602848 NCKAP5LQ9HCH0 1330 aa30.19■■■□□ 2.42
PPFIA3-211ENST00000602848 MINK1Q8N4C8 1332 aaPredicted RBP30.18■■■□□ 2.42
PPFIA3-211ENST00000602848 CC2D1BQ5T0F9 858 aaKnown RBP30.18■■■□□ 2.42
PPFIA3-211ENST00000602848 CNGB1Q14028 1251 aaPredicted RBP30.17■■■□□ 2.42
PPFIA3-211ENST00000602848 SRPK2P78362 688 aaKnown RBP30.15■■■□□ 2.42
PPFIA3-211ENST00000602848 SLC12A5Q9H2X9 1139 aa30.15■■■□□ 2.42
PPFIA3-211ENST00000602848 ANKLE2Q86XL3 938 aa30.14■■■□□ 2.42
PPFIA3-211ENST00000602848 CARD14Q9BXL6 1004 aa30.14■■■□□ 2.42
PPFIA3-211ENST00000602848 WAPLQ7Z5K2 1190 aa30.14■■■□□ 2.41
PPFIA3-211ENST00000602848 CABP2Q9NPB3 220 aa30.14■■■□□ 2.41
PPFIA3-211ENST00000602848 ANKRD36BQ8N2N9 1353 aa30.14■■■□□ 2.41
PPFIA3-211ENST00000602848 CDK19Q9BWU1 502 aa30.13■■■□□ 2.41
PPFIA3-211ENST00000602848 PIK3R4Q99570 1358 aa30.12■■■□□ 2.41
PPFIA3-211ENST00000602848 USP32Q8NFA0 1604 aa30.12■■■□□ 2.41
PPFIA3-211ENST00000602848 PLEKHH1Q9ULM0 1364 aa30.11■■■□□ 2.41
PPFIA3-211ENST00000602848 PNISRQ8TF01 805 aaKnown RBP30.11■■■□□ 2.41
PPFIA3-211ENST00000602848 FAM9BQ8IZU0 186 aa30.1■■■□□ 2.41
PPFIA3-211ENST00000602848 SLC26A8Q96RN1 970 aa30.07■■■□□ 2.4
PPFIA3-211ENST00000602848 NPHP4O75161 1426 aaPredicted RBP30.07■■■□□ 2.4
PPFIA3-211ENST00000602848 TERF2IPQ9NYB0 399 aa30.07■■■□□ 2.4
PPFIA3-211ENST00000602848 NSD3Q9BZ95 1437 aa30.06■■■□□ 2.4
PPFIA3-211ENST00000602848 WASLO00401 505 aaPredicted RBP30.06■■■□□ 2.4
PPFIA3-211ENST00000602848 ROBO2Q9HCK4 1378 aa30.05■■■□□ 2.4
PPFIA3-211ENST00000602848 HNRNPUQ00839 825 aaKnown RBP eCLIP30.04■■■□□ 2.4
PPFIA3-211ENST00000602848 NSD2O96028 1365 aa30.04■■■□□ 2.4
PPFIA3-211ENST00000602848 PTCH1Q13635 1447 aa30.04■■■□□ 2.4
PPFIA3-211ENST00000602848 PTPRUQ92729 1446 aa30.04■■■□□ 2.4
PPFIA3-211ENST00000602848 CGNL1Q0VF96 1302 aa30.03■■■□□ 2.4
PPFIA3-211ENST00000602848 PPP2R1AP30153 589 aa30.03■■■□□ 2.4
PPFIA3-211ENST00000602848 AMOTL2Q9Y2J4 779 aa30.02■■■□□ 2.4
PPFIA3-211ENST00000602848 ADGRB2O60241 1585 aa30.02■■■□□ 2.4
PPFIA3-211ENST00000602848 INSRP06213 1382 aa30.01■■■□□ 2.39
PPFIA3-211ENST00000602848 HDGFL2Q7Z4V5 671 aaPredicted RBP29.99■■■□□ 2.39
PPFIA3-211ENST00000602848 DMRT2Q9Y5R5 561 aa29.99■■■□□ 2.39
PPFIA3-211ENST00000602848 ATP7BP35670 1465 aa29.98■■■□□ 2.39
PPFIA3-211ENST00000602848 A0A1W2PP64 1363 aa29.97■■■□□ 2.39
PPFIA3-211ENST00000602848 XRN1Q8IZH2 1706 aaKnown RBP29.97■■■□□ 2.39
PPFIA3-211ENST00000602848 CD163L1Q9NR16 1453 aa29.95■■■□□ 2.39
PPFIA3-211ENST00000602848 CABP1Q9NZU7 370 aa29.93■■■□□ 2.38
PPFIA3-211ENST00000602848 ZBED9Q6R2W3 1325 aa29.93■■■□□ 2.38
PPFIA3-211ENST00000602848 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.92■■■□□ 2.38
PPFIA3-211ENST00000602848 MORC1Q86VD1 984 aa29.92■■■□□ 2.38
PPFIA3-211ENST00000602848 CCDC61Q9Y6R9 512 aa29.92■■■□□ 2.38
PPFIA3-211ENST00000602848 NUDT16Q96DE0 195 aaKnown RBP29.91■■■□□ 2.38
PPFIA3-211ENST00000602848 PPIP5K1Q6PFW1 1433 aa29.87■■■□□ 2.37
PPFIA3-211ENST00000602848 CHD2O14647 1828 aaKnown RBP29.87■■■□□ 2.37
PPFIA3-211ENST00000602848 CPSF1Q10570 1443 aaKnown RBP29.86■■■□□ 2.37
PPFIA3-211ENST00000602848 ZNF692Q9BU19 519 aaPredicted RBP29.84■■■□□ 2.37
PPFIA3-211ENST00000602848 STRCP1A6NGW2 1772 aa29.83■■■□□ 2.37
PPFIA3-211ENST00000602848 KCNA6P17658 529 aa29.82■■■□□ 2.36
PPFIA3-211ENST00000602848 POLR3AO14802 1390 aaPredicted RBP29.82■■■□□ 2.36
PPFIA3-211ENST00000602848 CDC42BPGQ6DT37 1551 aa29.82■■■□□ 2.36
PPFIA3-211ENST00000602848 ZNF335Q9H4Z2 1342 aaPredicted RBP29.82■■■□□ 2.36
PPFIA3-211ENST00000602848 ANKRD26Q9UPS8 1709 aa29.81■■■□□ 2.36
PPFIA3-211ENST00000602848 EDC4Q6P2E9 1401 aaKnown RBP29.8■■■□□ 2.36
PPFIA3-211ENST00000602848 LTBP4Q8N2S1 1624 aa29.8■■■□□ 2.36
PPFIA3-211ENST00000602848 PLEKHG3A1L390 1219 aa29.79■■■□□ 2.36
PPFIA3-211ENST00000602848 FYB1O15117 783 aa29.79■■■□□ 2.36
PPFIA3-211ENST00000602848 GTF3C3Q9Y5Q9 886 aa29.79■■■□□ 2.36
PPFIA3-211ENST00000602848 PRR36Q9H6K5 1346 aa29.79■■■□□ 2.36
PPFIA3-211ENST00000602848 WDR43Q15061 677 aaKnown RBP eCLIP29.78■■■□□ 2.36
PPFIA3-211ENST00000602848 SCAF1Q9H7N4 1312 aaKnown RBP29.78■■■□□ 2.36
PPFIA3-211ENST00000602848 BLMP54132 1417 aaPredicted RBP29.77■■■□□ 2.36
PPFIA3-211ENST00000602848 TOPAZ1Q8N9V7 1692 aa29.77■■■□□ 2.36
PPFIA3-211ENST00000602848 NWD1Q149M9 1564 aa29.76■■■□□ 2.35
PPFIA3-211ENST00000602848 KIF20BQ96Q89 1820 aa29.75■■■□□ 2.35
PPFIA3-211ENST00000602848 AKAP12Q02952 1782 aa29.75■■■□□ 2.35
PPFIA3-211ENST00000602848 ANKARQ7Z5J8 1434 aa29.74■■■□□ 2.35
PPFIA3-211ENST00000602848 MON2Q7Z3U7 1717 aa29.74■■■□□ 2.35
PPFIA3-211ENST00000602848 ITSN1Q15811 1721 aa29.73■■■□□ 2.35
PPFIA3-211ENST00000602848 CFAP53Q96M91 514 aa29.72■■■□□ 2.35
PPFIA3-211ENST00000602848 ADAMTS8Q9UP79 889 aa29.71■■■□□ 2.35
PPFIA3-211ENST00000602848 GGNBP2Q9H3C7 697 aa29.71■■■□□ 2.35
PPFIA3-211ENST00000602848 MTHFSP49914 203 aa29.67■■■□□ 2.34
PPFIA3-211ENST00000602848 TNNT2P45379 298 aaPredicted RBP29.66■■■□□ 2.34
PPFIA3-211ENST00000602848 FMN2Q9NZ56 1722 aa29.66■■■□□ 2.34
PPFIA3-211ENST00000602848 ACEP12821 1306 aa29.65■■■□□ 2.34
PPFIA3-211ENST00000602848 PDE3BQ13370 1112 aa29.63■■■□□ 2.33
PPFIA3-211ENST00000602848 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.63■■■□□ 2.33
PPFIA3-211ENST00000602848 ADGRL3Q9HAR2 1447 aa29.63■■■□□ 2.33
PPFIA3-211ENST00000602848 NKTRP30414 1462 aaKnown RBP29.63■■■□□ 2.33
PPFIA3-211ENST00000602848 NGEFQ8N5V2 710 aa29.62■■■□□ 2.33
PPFIA3-211ENST00000602848 LRRC7Q96NW7 1537 aa29.61■■■□□ 2.33
PPFIA3-211ENST00000602848 USP6P35125 1406 aa29.6■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms