RNA–Protein interactions for RNA: ENST00000602511.1

KDM5B-210, Transcript of lysine demethylase 5B, humanhuman

TSL 5

Gene KDM5B, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5B-210ENST00000602511 CFAP70Q5T0N1 1121 aa11.51□□□□□ -0.57
KDM5B-210ENST00000602511 PIK3R4Q99570 1358 aa11.51□□□□□ -0.57
KDM5B-210ENST00000602511 CACNB1Q02641 598 aaPredicted RBP11.5□□□□□ -0.57
KDM5B-210ENST00000602511 YTHDC2Q9H6S0 1430 aaKnown RBP11.5□□□□□ -0.57
KDM5B-210ENST00000602511 POTEAQ6S8J7 498 aa11.49□□□□□ -0.57
KDM5B-210ENST00000602511 TXNDC2Q86VQ3 553 aa11.49□□□□□ -0.57
KDM5B-210ENST00000602511 NWD1Q149M9 1564 aa11.49□□□□□ -0.57
KDM5B-210ENST00000602511 LTKP29376 864 aa11.48□□□□□ -0.57
KDM5B-210ENST00000602511 ANKLE2Q86XL3 938 aa11.48□□□□□ -0.57
KDM5B-210ENST00000602511 LRPPRCP42704 1394 aaKnown RBP11.48□□□□□ -0.57
KDM5B-210ENST00000602511 ADGRB2O60241 1585 aa11.47□□□□□ -0.57
KDM5B-210ENST00000602511 FAM135BQ49AJ0 1406 aa11.47□□□□□ -0.57
KDM5B-210ENST00000602511 ABCC11Q96J66 1382 aa11.47□□□□□ -0.57
KDM5B-210ENST00000602511 MYOM1P52179 1685 aa11.46□□□□□ -0.57
KDM5B-210ENST00000602511 NPHP4O75161 1426 aaPredicted RBP11.46□□□□□ -0.57
KDM5B-210ENST00000602511 PTCH1Q13635 1447 aa11.46□□□□□ -0.57
KDM5B-210ENST00000602511 NUTM2DQ5VT03 806 aaPredicted RBP11.46□□□□□ -0.57
KDM5B-210ENST00000602511 SIRT1Q96EB6 747 aa11.46□□□□□ -0.57
KDM5B-210ENST00000602511 TBX22Q9Y458 520 aa11.46□□□□□ -0.57
KDM5B-210ENST00000602511 ST20-MTHFSA0A0A6YYL1 179 aa11.44□□□□□ -0.58
KDM5B-210ENST00000602511 METP08581 1390 aa11.43□□□□□ -0.58
KDM5B-210ENST00000602511 CCDC7Q96M83 1385 aa11.43□□□□□ -0.58
KDM5B-210ENST00000602511 CENPJQ9HC77 1338 aaPredicted RBP11.43□□□□□ -0.58
KDM5B-210ENST00000602511 TESK2Q96S53 571 aa11.43□□□□□ -0.58
KDM5B-210ENST00000602511 ITSN1Q15811 1721 aa11.43□□□□□ -0.58
KDM5B-210ENST00000602511 CDCA8Q53HL2 280 aa11.42□□□□□ -0.58
KDM5B-210ENST00000602511 TULP4Q9NRJ4 1543 aa11.41□□□□□ -0.58
KDM5B-210ENST00000602511 NKTRP30414 1462 aaKnown RBP11.41□□□□□ -0.58
KDM5B-210ENST00000602511 TMF1P82094 1093 aa11.41□□□□□ -0.58
KDM5B-210ENST00000602511 TMEM132EQ6IEE7 984 aa11.41□□□□□ -0.58
KDM5B-210ENST00000602511 PUS7Q96PZ0 661 aaKnown RBP11.41□□□□□ -0.58
KDM5B-210ENST00000602511 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.4□□□□□ -0.58
KDM5B-210ENST00000602511 WASHC2AQ641Q2 1341 aa11.4□□□□□ -0.58
KDM5B-210ENST00000602511 SRCAPQ6ZRS2 3230 aa11.4□□□□□ -0.58
KDM5B-210ENST00000602511 UPF1Q92900 1129 aaKnown RBP eCLIP11.4□□□□□ -0.58
KDM5B-210ENST00000602511 SPINK5Q9NQ38 1064 aaPredicted RBP11.4□□□□□ -0.58
KDM5B-210ENST00000602511 PTPRUQ92729 1446 aa11.4□□□□□ -0.58
KDM5B-210ENST00000602511 NALCNQ8IZF0 1738 aa11.4□□□□□ -0.58
KDM5B-210ENST00000602511 KIF7Q2M1P5 1343 aa11.39□□□□□ -0.59
KDM5B-210ENST00000602511 STRCP1A6NGW2 1772 aa11.39□□□□□ -0.59
KDM5B-210ENST00000602511 TRAK1Q9UPV9 953 aa11.39□□□□□ -0.59
KDM5B-210ENST00000602511 TOPAZ1Q8N9V7 1692 aa11.39□□□□□ -0.59
KDM5B-210ENST00000602511 BCANQ96GW7 911 aa11.38□□□□□ -0.59
KDM5B-210ENST00000602511 HIRIP3Q9BW71 556 aaPredicted RBP11.38□□□□□ -0.59
KDM5B-210ENST00000602511 FMN2Q9NZ56 1722 aa11.38□□□□□ -0.59
KDM5B-210ENST00000602511 CDC42BPGQ6DT37 1551 aa11.37□□□□□ -0.59
KDM5B-210ENST00000602511 USP32Q8NFA0 1604 aa11.37□□□□□ -0.59
KDM5B-210ENST00000602511 NINLQ9Y2I6 1382 aa11.37□□□□□ -0.59
KDM5B-210ENST00000602511 AKAP12Q02952 1782 aa11.36□□□□□ -0.59
KDM5B-210ENST00000602511 CAPN15O75808 1086 aa11.36□□□□□ -0.59
KDM5B-210ENST00000602511 ATXN8OSP0DMR3 200 aa11.36□□□□□ -0.59
KDM5B-210ENST00000602511 EVC2Q86UK5 1308 aa11.35□□□□□ -0.59
KDM5B-210ENST00000602511 XIRP1Q702N8 1843 aaKnown RBP11.35□□□□□ -0.59
KDM5B-210ENST00000602511 C11orf95C9JLR9 678 aaPredicted RBP11.35□□□□□ -0.59
KDM5B-210ENST00000602511 PRAM1Q96QH2 718 aa11.35□□□□□ -0.59
KDM5B-210ENST00000602511 SLC26A8Q96RN1 970 aa11.35□□□□□ -0.59
KDM5B-210ENST00000602511 POGKQ9P215 609 aa11.35□□□□□ -0.59
KDM5B-210ENST00000602511 ROBO2Q9HCK4 1378 aa11.35□□□□□ -0.59
KDM5B-210ENST00000602511 NCOA3Q9Y6Q9 1424 aa11.35□□□□□ -0.59
KDM5B-210ENST00000602511 ATAD2Q6PL18 1390 aa11.34□□□□□ -0.59
KDM5B-210ENST00000602511 DIEXFQ68CQ4 756 aaKnown RBP11.34□□□□□ -0.59
KDM5B-210ENST00000602511 STK26Q9P289 416 aa11.34□□□□□ -0.59
KDM5B-210ENST00000602511 AMOTL2Q9Y2J4 779 aa11.34□□□□□ -0.59
KDM5B-210ENST00000602511 RGPD8O14715 1765 aaPredicted RBP11.33□□□□□ -0.59
KDM5B-210ENST00000602511 MON2Q7Z3U7 1717 aa11.33□□□□□ -0.6
KDM5B-210ENST00000602511 ANKRD26Q9UPS8 1709 aa11.33□□□□□ -0.6
KDM5B-210ENST00000602511 PLEKHH1Q9ULM0 1364 aa11.32□□□□□ -0.6
KDM5B-210ENST00000602511 KCNA6P17658 529 aa11.32□□□□□ -0.6
KDM5B-210ENST00000602511 KIF20BQ96Q89 1820 aa11.31□□□□□ -0.6
KDM5B-210ENST00000602511 ADGRL3Q9HAR2 1447 aa11.31□□□□□ -0.6
KDM5B-210ENST00000602511 ATP7BP35670 1465 aa11.31□□□□□ -0.6
KDM5B-210ENST00000602511 DCCP43146 1447 aa11.3□□□□□ -0.6
KDM5B-210ENST00000602511 ANKARQ7Z5J8 1434 aa11.3□□□□□ -0.6
KDM5B-210ENST00000602511 DDX10Q13206 875 aaKnown RBP11.3□□□□□ -0.6
KDM5B-210ENST00000602511 ZNF219Q9P2Y4 722 aaPredicted RBP11.3□□□□□ -0.6
KDM5B-210ENST00000602511 ATF5Q9Y2D1 282 aaPredicted RBP11.3□□□□□ -0.6
KDM5B-210ENST00000602511 KTN1Q86UP2 1357 aaKnown RBP11.29□□□□□ -0.6
KDM5B-210ENST00000602511 KIF1AQ12756 1690 aa11.29□□□□□ -0.6
KDM5B-210ENST00000602511 NRKQ7Z2Y5 1582 aa11.28□□□□□ -0.6
KDM5B-210ENST00000602511 WASLO00401 505 aaPredicted RBP11.28□□□□□ -0.6
KDM5B-210ENST00000602511 WAPLQ7Z5K2 1190 aa11.28□□□□□ -0.6
KDM5B-210ENST00000602511 MINK1Q8N4C8 1332 aaPredicted RBP11.28□□□□□ -0.6
KDM5B-210ENST00000602511 ANKRD36BQ8N2N9 1353 aa11.28□□□□□ -0.6
KDM5B-210ENST00000602511 NPC1L1Q9UHC9 1359 aa11.28□□□□□ -0.6
KDM5B-210ENST00000602511 CDK19Q9BWU1 502 aa11.26□□□□□ -0.61
KDM5B-210ENST00000602511 USP54Q70EL1 1684 aa11.26□□□□□ -0.61
KDM5B-210ENST00000602511 SRPK2P78362 688 aaKnown RBP11.25□□□□□ -0.61
KDM5B-210ENST00000602511 SAFB2Q14151 953 aaKnown RBP eCLIP11.25□□□□□ -0.61
KDM5B-210ENST00000602511 CD163L1Q9NR16 1453 aa11.25□□□□□ -0.61
KDM5B-210ENST00000602511 POLR3GLQ9BT43 218 aa11.24□□□□□ -0.61
KDM5B-210ENST00000602511 PPIP5K1Q6PFW1 1433 aa11.24□□□□□ -0.61
KDM5B-210ENST00000602511 LRRC7Q96NW7 1537 aa11.24□□□□□ -0.61
KDM5B-210ENST00000602511 PER1O15534 1290 aaPredicted RBP11.23□□□□□ -0.61
KDM5B-210ENST00000602511 CABP2Q9NPB3 220 aa11.23□□□□□ -0.61
KDM5B-210ENST00000602511 NSD2O96028 1365 aa11.23□□□□□ -0.61
KDM5B-210ENST00000602511 CPSF1Q10570 1443 aaKnown RBP11.23□□□□□ -0.61
KDM5B-210ENST00000602511 ANP32CO43423 234 aa11.22□□□□□ -0.61
KDM5B-210ENST00000602511 PANK3Q9H999 370 aa11.22□□□□□ -0.61
KDM5B-210ENST00000602511 TERF2IPQ9NYB0 399 aa11.22□□□□□ -0.61
KDM5B-210ENST00000602511 CCDC61Q9Y6R9 512 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms