RNA–Protein interactions for RNA: ENST00000601772.1

DDX49-211, Transcript of DEAD-box helicase 49, humanhuman

TSL 3

Gene DDX49, Length 342 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-211ENST00000601772 SLC52A1Q9NWF4 448 aa12.7□□□□□ -0.38
DDX49-211ENST00000601772 AMOTL2Q9Y2J4 779 aa12.7□□□□□ -0.38
DDX49-211ENST00000601772 RALGAPBQ86X10 1494 aa12.7□□□□□ -0.38
DDX49-211ENST00000601772 ADAMTS13Q76LX8 1427 aa12.69□□□□□ -0.38
DDX49-211ENST00000601772 GLI3P10071 1580 aa12.69□□□□□ -0.38
DDX49-211ENST00000601772 TRPM2O94759 1503 aa12.68□□□□□ -0.38
DDX49-211ENST00000601772 CLTCL1P53675 1640 aa12.67□□□□□ -0.38
DDX49-211ENST00000601772 SEPT12Q8IYM1 358 aa12.67□□□□□ -0.38
DDX49-211ENST00000601772 ZNF784Q8NCA9 323 aaPredicted RBP12.67□□□□□ -0.38
DDX49-211ENST00000601772 PTPRUQ92729 1446 aa12.67□□□□□ -0.38
DDX49-211ENST00000601772 PIK3R4Q99570 1358 aa12.67□□□□□ -0.38
DDX49-211ENST00000601772 CHGAP10645 457 aaKnown RBP12.66□□□□□ -0.38
DDX49-211ENST00000601772 EN1Q05925 392 aaPredicted RBP12.66□□□□□ -0.38
DDX49-211ENST00000601772 PPP1R1BQ9UD71 204 aaPredicted RBP12.66□□□□□ -0.38
DDX49-211ENST00000601772 A0A0G2JS52 829 aa12.65□□□□□ -0.38
DDX49-211ENST00000601772 C1QTNF8P60827 252 aa12.65□□□□□ -0.38
DDX49-211ENST00000601772 MYT1Q01538 1121 aa12.65□□□□□ -0.38
DDX49-211ENST00000601772 MARF1Q9Y4F3 1742 aaKnown RBP12.65□□□□□ -0.38
DDX49-211ENST00000601772 COL22A1Q8NFW1 1626 aaPredicted RBP12.64□□□□□ -0.39
DDX49-211ENST00000601772 KRT27Q7Z3Y8 459 aa12.64□□□□□ -0.39
DDX49-211ENST00000601772 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.64□□□□□ -0.39
DDX49-211ENST00000601772 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.64□□□□□ -0.39
DDX49-211ENST00000601772 MYOM2P54296 1465 aa12.64□□□□□ -0.39
DDX49-211ENST00000601772 UNC5CLQ8IV45 518 aa12.63□□□□□ -0.39
DDX49-211ENST00000601772 C1orf167Q5SNV9 1468 aa12.63□□□□□ -0.39
DDX49-211ENST00000601772 SOS2Q07890 1332 aaPredicted RBP12.62□□□□□ -0.39
DDX49-211ENST00000601772 CCDC9Q9Y3X0 531 aaKnown RBP12.62□□□□□ -0.39
DDX49-211ENST00000601772 ADGRL3Q9HAR2 1447 aa12.62□□□□□ -0.39
DDX49-211ENST00000601772 NALCNQ8IZF0 1738 aa12.61□□□□□ -0.39
DDX49-211ENST00000601772 XRN1Q8IZH2 1706 aaKnown RBP12.61□□□□□ -0.39
DDX49-211ENST00000601772 CAMTA1Q9Y6Y1 1673 aa12.61□□□□□ -0.39
DDX49-211ENST00000601772 LAMC1P11047 1609 aa12.6□□□□□ -0.39
DDX49-211ENST00000601772 ORAI2Q96SN7 254 aa12.6□□□□□ -0.39
DDX49-211ENST00000601772 SLC4A1APQ9BWU0 796 aaKnown RBP12.6□□□□□ -0.39
DDX49-211ENST00000601772 PPLO60437 1756 aa12.58□□□□□ -0.39
DDX49-211ENST00000601772 RGPD1P0DJD0 1748 aa12.58□□□□□ -0.4
DDX49-211ENST00000601772 NRXN3Q9Y4C0 1643 aa12.58□□□□□ -0.4
DDX49-211ENST00000601772 CEP350Q5VT06 3117 aa12.57□□□□□ -0.4
DDX49-211ENST00000601772 NEXMIFQ5QGS0 1516 aa12.57□□□□□ -0.4
DDX49-211ENST00000601772 EZH2Q15910 746 aaKnown RBP12.57□□□□□ -0.4
DDX49-211ENST00000601772 CCER1Q8TC90 406 aaPredicted RBP12.57□□□□□ -0.4
DDX49-211ENST00000601772 SLIT2O94813 1529 aa12.57□□□□□ -0.4
DDX49-211ENST00000601772 IFT172Q9UG01 1749 aa12.57□□□□□ -0.4
DDX49-211ENST00000601772 RAB3GAP2Q9H2M9 1393 aa12.56□□□□□ -0.4
DDX49-211ENST00000601772 NINLQ9Y2I6 1382 aa12.56□□□□□ -0.4
DDX49-211ENST00000601772 XPCQ01831 940 aaPredicted RBP12.56□□□□□ -0.4
DDX49-211ENST00000601772 FAM182BQ5T319 152 aa12.55□□□□□ -0.4
DDX49-211ENST00000601772 MPHOSPH9Q99550 1183 aa12.55□□□□□ -0.4
DDX49-211ENST00000601772 ZNF326Q5BKZ1 582 aaKnown RBP12.54□□□□□ -0.4
DDX49-211ENST00000601772 ACIN1Q9UKV3 1341 aaKnown RBP12.54□□□□□ -0.4
DDX49-211ENST00000601772 VPS72Q15906 364 aa12.53□□□□□ -0.4
DDX49-211ENST00000601772 SPON1Q9HCB6 807 aa12.53□□□□□ -0.4
DDX49-211ENST00000601772 PLEKHG5O94827 1062 aa12.52□□□□□ -0.41
DDX49-211ENST00000601772 NPHP3Q7Z494 1330 aa12.52□□□□□ -0.41
DDX49-211ENST00000601772 METP08581 1390 aa12.52□□□□□ -0.41
DDX49-211ENST00000601772 TNS1Q9HBL0 1735 aaKnown RBP12.51□□□□□ -0.41
DDX49-211ENST00000601772 HAP1P54257 671 aaPredicted RBP12.51□□□□□ -0.41
DDX49-211ENST00000601772 CCDC144AA2RUR9 1427 aa12.51□□□□□ -0.41
DDX49-211ENST00000601772 DISP2A7MBM2 1401 aa12.51□□□□□ -0.41
DDX49-211ENST00000601772 ADGRB2O60241 1585 aa12.51□□□□□ -0.41
DDX49-211ENST00000601772 GIGYF1O75420 1035 aaPredicted RBP12.5□□□□□ -0.41
DDX49-211ENST00000601772 CENPBP07199 599 aaPredicted RBP12.5□□□□□ -0.41
DDX49-211ENST00000601772 FAM98CQ17RN3 349 aaKnown RBP12.5□□□□□ -0.41
DDX49-211ENST00000601772 PXDNQ92626 1479 aa12.5□□□□□ -0.41
DDX49-211ENST00000601772 USP32Q8NFA0 1604 aa12.5□□□□□ -0.41
DDX49-211ENST00000601772 PLCH1Q4KWH8 1693 aa12.49□□□□□ -0.41
DDX49-211ENST00000601772 ONECUT3O60422 494 aaPredicted RBP12.49□□□□□ -0.41
DDX49-211ENST00000601772 ESCO1Q5FWF5 840 aa12.49□□□□□ -0.41
DDX49-211ENST00000601772 KCNQ2O43526 872 aa12.48□□□□□ -0.41
DDX49-211ENST00000601772 UTRNP46939 3433 aa12.47□□□□□ -0.41
DDX49-211ENST00000601772 SPATA31E1Q6ZUB1 1445 aa12.47□□□□□ -0.41
DDX49-211ENST00000601772 NBPF8Q3BBV2 869 aa12.47□□□□□ -0.41
DDX49-211ENST00000601772 NBPF14Q5TI25 921 aa12.47□□□□□ -0.41
DDX49-211ENST00000601772 CAMKK2Q96RR4 588 aa12.47□□□□□ -0.41
DDX49-211ENST00000601772 FOXO3O43524 673 aa12.46□□□□□ -0.41
DDX49-211ENST00000601772 TRIM37O94972 964 aa12.46□□□□□ -0.41
DDX49-211ENST00000601772 RPGRIP1LQ68CZ1 1315 aa12.45□□□□□ -0.42
DDX49-211ENST00000601772 APBA3O96018 575 aa12.45□□□□□ -0.42
DDX49-211ENST00000601772 VGFO15240 615 aaPredicted RBP12.44□□□□□ -0.42
DDX49-211ENST00000601772 NUP188Q5SRE5 1749 aa12.44□□□□□ -0.42
DDX49-211ENST00000601772 NWD2Q9ULI1 1742 aa12.44□□□□□ -0.42
DDX49-211ENST00000601772 CHD4Q14839 1912 aa12.43□□□□□ -0.42
DDX49-211ENST00000601772 RREB1Q92766 1687 aa12.43□□□□□ -0.42
DDX49-211ENST00000601772 RGL3Q3MIN7 710 aa12.43□□□□□ -0.42
DDX49-211ENST00000601772 NRKQ7Z2Y5 1582 aa12.43□□□□□ -0.42
DDX49-211ENST00000601772 PARD3Q8TEW0 1356 aa12.43□□□□□ -0.42
DDX49-211ENST00000601772 DIEXFQ68CQ4 756 aaKnown RBP12.42□□□□□ -0.42
DDX49-211ENST00000601772 LRPPRCP42704 1394 aaKnown RBP12.42□□□□□ -0.42
DDX49-211ENST00000601772 ANKRD30BQ9BXX2 1392 aa12.42□□□□□ -0.42
DDX49-211ENST00000601772 CABLES1Q8TDN4 633 aa12.41□□□□□ -0.42
DDX49-211ENST00000601772 ROBO2Q9HCK4 1378 aa12.41□□□□□ -0.42
DDX49-211ENST00000601772 CLSPNQ9HAW4 1339 aa12.4□□□□□ -0.42
DDX49-211ENST00000601772 KNDC1Q76NI1 1749 aa12.4□□□□□ -0.42
DDX49-211ENST00000601772 NUTM2FA1L443 756 aa12.4□□□□□ -0.42
DDX49-211ENST00000601772 SPATA31A3Q5VYP0 1347 aa12.39□□□□□ -0.43
DDX49-211ENST00000601772 ADGRF5Q8IZF2 1346 aa12.39□□□□□ -0.43
DDX49-211ENST00000601772 CAPN15O75808 1086 aa12.39□□□□□ -0.43
DDX49-211ENST00000601772 MYOM1P52179 1685 aa12.38□□□□□ -0.43
DDX49-211ENST00000601772 PIK3C2GO75747 1445 aa12.37□□□□□ -0.43
DDX49-211ENST00000601772 ZNF316A6NFI3 1004 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms