RNA–Protein interactions for RNA: ENST00000592208.5

RAVER1-204, Transcript of ribonucleoprotein, PTB binding 1, humanhuman

TSL 1 (best)

Gene RAVER1, Length 4,693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAVER1-204ENST00000592208 ZKSCAN1P17029 563 aaPredicted RBP17.97■□□□□ 0.47
RAVER1-204ENST00000592208 SYNE3Q6ZMZ3 975 aa17.97■□□□□ 0.47
RAVER1-204ENST00000592208 DIAPH3Q9NSV4 1193 aa17.97■□□□□ 0.47
RAVER1-204ENST00000592208 FKBP5Q13451 457 aaPredicted RBP17.97■□□□□ 0.47
RAVER1-204ENST00000592208 CNTLNQ9NXG0 1405 aa17.96■□□□□ 0.47
RAVER1-204ENST00000592208 RASSF8Q8NHQ8 419 aa17.96■□□□□ 0.47
RAVER1-204ENST00000592208 WDR62O43379 1518 aa17.96■□□□□ 0.47
RAVER1-204ENST00000592208 PCF11O94913 1555 aaKnown RBP17.96■□□□□ 0.47
RAVER1-204ENST00000592208 AMOTL1Q8IY63 956 aa17.96■□□□□ 0.47
RAVER1-204ENST00000592208 TOMM22Q9NS69 142 aa17.96■□□□□ 0.47
RAVER1-204ENST00000592208 BRD4O60885 1362 aaPredicted RBP17.96■□□□□ 0.47
RAVER1-204ENST00000592208 NAIPQ13075 1403 aa17.96■□□□□ 0.47
RAVER1-204ENST00000592208 MAP3K1Q13233 1512 aa17.95■□□□□ 0.46
RAVER1-204ENST00000592208 AKAP17AQ02040 695 aaKnown RBP17.95■□□□□ 0.46
RAVER1-204ENST00000592208 NOL10Q9BSC4 688 aaKnown RBP17.95■□□□□ 0.46
RAVER1-204ENST00000592208 RNF20Q5VTR2 975 aa17.94■□□□□ 0.46
RAVER1-204ENST00000592208 FAM184AQ8NB25 1140 aa17.93■□□□□ 0.46
RAVER1-204ENST00000592208 ZNF692Q9BU19 519 aaPredicted RBP17.93■□□□□ 0.46
RAVER1-204ENST00000592208 ADAMTS8Q9UP79 889 aa17.93■□□□□ 0.46
RAVER1-204ENST00000592208 RILPL2Q969X0 211 aa17.93■□□□□ 0.46
RAVER1-204ENST00000592208 CAMSAP2Q08AD1 1489 aa17.92■□□□□ 0.46
RAVER1-204ENST00000592208 PDE4AP27815 886 aa17.92■□□□□ 0.46
RAVER1-204ENST00000592208 STRN4Q9NRL3 753 aa17.92■□□□□ 0.46
RAVER1-204ENST00000592208 EXOC6Q8TAG9 804 aa17.92■□□□□ 0.46
RAVER1-204ENST00000592208 PPP6R1Q9UPN7 881 aa17.92■□□□□ 0.46
RAVER1-204ENST00000592208 KIF14Q15058 1648 aa17.92■□□□□ 0.46
RAVER1-204ENST00000592208 RTEL1-TNFRSF6BF6WH68 1400 aa17.92■□□□□ 0.46
RAVER1-204ENST00000592208 H3BQV1 296 aa17.92■□□□□ 0.46
RAVER1-204ENST00000592208 IFIT2P09913 472 aaKnown RBP17.92■□□□□ 0.46
RAVER1-204ENST00000592208 IFFO2Q5TF58 517 aa17.92■□□□□ 0.46
RAVER1-204ENST00000592208 PPP2R1AP30153 589 aa17.91■□□□□ 0.46
RAVER1-204ENST00000592208 G3BP1Q13283 466 aaKnown RBP eCLIP17.91■□□□□ 0.461e-6■□□□□ 9.8
RAVER1-204ENST00000592208 TCP11L2Q8N4U5 519 aa17.91■□□□□ 0.46
RAVER1-204ENST00000592208 CRBNQ96SW2 442 aa17.91■□□□□ 0.46
RAVER1-204ENST00000592208 MARCH6O60337 910 aa17.91■□□□□ 0.46
RAVER1-204ENST00000592208 CEBPAP49715 358 aaPredicted RBP17.91■□□□□ 0.46
RAVER1-204ENST00000592208 PRKAR2BP31323 418 aa17.9■□□□□ 0.46
RAVER1-204ENST00000592208 FBXO31Q5XUX0 539 aaPredicted RBP17.9■□□□□ 0.46
RAVER1-204ENST00000592208 ABCC5O15440 1437 aa17.9■□□□□ 0.46
RAVER1-204ENST00000592208 ERC2O15083 957 aa17.9■□□□□ 0.46
RAVER1-204ENST00000592208 TSHZ2Q9NRE2 1034 aa17.89■□□□□ 0.45
RAVER1-204ENST00000592208 GAS2L2Q8NHY3 880 aa17.89■□□□□ 0.45
RAVER1-204ENST00000592208 WDR97A6NE52 1622 aa17.89■□□□□ 0.45
RAVER1-204ENST00000592208 GZF1Q9H116 711 aaPredicted RBP17.88■□□□□ 0.45
RAVER1-204ENST00000592208 ANO8Q9HCE9 1232 aaPredicted RBP17.87■□□□□ 0.45
RAVER1-204ENST00000592208 TEX14Q8IWB6 1497 aa17.87■□□□□ 0.45
RAVER1-204ENST00000592208 AIMP1Q12904 312 aaKnown RBP17.87■□□□□ 0.45
RAVER1-204ENST00000592208 TPM3P06753 285 aa17.87■□□□□ 0.45
RAVER1-204ENST00000592208 TRDNQ13061 729 aa17.87■□□□□ 0.45
RAVER1-204ENST00000592208 IDI1Q13907 227 aa17.87■□□□□ 0.45
RAVER1-204ENST00000592208 PLEKHO1Q53GL0 409 aaPredicted RBP17.86■□□□□ 0.45
RAVER1-204ENST00000592208 DENND4BO75064 1496 aaPredicted RBP17.86■□□□□ 0.45
RAVER1-204ENST00000592208 CCDC61Q9Y6R9 512 aa17.86■□□□□ 0.45
RAVER1-204ENST00000592208 XPCQ01831 940 aaPredicted RBP17.86■□□□□ 0.45
RAVER1-204ENST00000592208 FANCAO15360 1455 aa17.86■□□□□ 0.45
RAVER1-204ENST00000592208 NUTM2BA6NNL0 878 aaPredicted RBP17.86■□□□□ 0.45
RAVER1-204ENST00000592208 NUTM2EB1AL46 878 aaPredicted RBP17.86■□□□□ 0.45
RAVER1-204ENST00000592208 NUTM2AQ8IVF1 878 aaPredicted RBP17.86■□□□□ 0.45
RAVER1-204ENST00000592208 TRIM29Q14134 588 aa17.85■□□□□ 0.45
RAVER1-204ENST00000592208 NOL8Q76FK4 1167 aaKnown RBP17.85■□□□□ 0.45
RAVER1-204ENST00000592208 INTS3Q68E01 1043 aaKnown RBP17.85■□□□□ 0.45
RAVER1-204ENST00000592208 SULT6B1Q6IMI4 303 aa17.85■□□□□ 0.45
RAVER1-204ENST00000592208 PRDM11Q9NQV5 511 aa17.85■□□□□ 0.45
RAVER1-204ENST00000592208 GNAI3P08754 354 aa17.84■□□□□ 0.45
RAVER1-204ENST00000592208 RIC3Q7Z5B4 369 aa17.84■□□□□ 0.45
RAVER1-204ENST00000592208 WAPLQ7Z5K2 1190 aa17.84■□□□□ 0.45
RAVER1-204ENST00000592208 TSR1Q2NL82 804 aaKnown RBP17.84■□□□□ 0.45
RAVER1-204ENST00000592208 CEP89Q96ST8 783 aa17.84■□□□□ 0.45
RAVER1-204ENST00000592208 ADAMTS12P58397 1594 aa17.83■□□□□ 0.45
RAVER1-204ENST00000592208 ATAD2Q6PL18 1390 aa17.83■□□□□ 0.45
RAVER1-204ENST00000592208 CCDC47Q96A33 483 aaKnown RBP17.83■□□□□ 0.45
RAVER1-204ENST00000592208 AKNAQ7Z591 1439 aa17.83■□□□□ 0.45
RAVER1-204ENST00000592208 TATP17735 454 aaPredicted RBP17.83■□□□□ 0.44
RAVER1-204ENST00000592208 TOM1L2Q6ZVM7 507 aa17.83■□□□□ 0.44
RAVER1-204ENST00000592208 NCOA1Q15788 1441 aa17.83■□□□□ 0.44
RAVER1-204ENST00000592208 NUDT16Q96DE0 195 aaKnown RBP17.83■□□□□ 0.44
RAVER1-204ENST00000592208 KIF21AQ7Z4S6 1674 aa17.83■□□□□ 0.44
RAVER1-204ENST00000592208 CT47B1P0C2W7 299 aaPredicted RBP17.83■□□□□ 0.44
RAVER1-204ENST00000592208 TPM2P07951 284 aa17.82■□□□□ 0.44
RAVER1-204ENST00000592208 TPM1P09493 284 aa17.82■□□□□ 0.44
RAVER1-204ENST00000592208 PIP4K2BP78356 416 aa17.82■□□□□ 0.44
RAVER1-204ENST00000592208 DDX49Q9Y6V7 483 aaKnown RBP17.82■□□□□ 0.44
RAVER1-204ENST00000592208 GOLGA6L19H0YKK7 550 aa17.81■□□□□ 0.44
RAVER1-204ENST00000592208 NOC3LQ8WTT2 800 aaKnown RBP17.81■□□□□ 0.44
RAVER1-204ENST00000592208 THOC2Q8NI27 1593 aaKnown RBP17.81■□□□□ 0.44
RAVER1-204ENST00000592208 CPLX1O14810 134 aa17.81■□□□□ 0.44
RAVER1-204ENST00000592208 HOOK1Q9UJC3 728 aaKnown RBP17.81■□□□□ 0.44
RAVER1-204ENST00000592208 PHF23Q9BUL5 403 aaPredicted RBP17.81■□□□□ 0.44
RAVER1-204ENST00000592208 NUCB2P80303 420 aa17.8■□□□□ 0.44
RAVER1-204ENST00000592208 VPS37DQ86XT2 251 aa17.8■□□□□ 0.44
RAVER1-204ENST00000592208 HMGB2P26583 209 aaKnown RBP17.8■□□□□ 0.44
RAVER1-204ENST00000592208 CCDC30Q5VVM6 783 aa17.8■□□□□ 0.44
RAVER1-204ENST00000592208 TRIM34Q9BYJ4 488 aa17.8■□□□□ 0.44
RAVER1-204ENST00000592208 RTN4Q9NQC3 1192 aaKnown RBP17.8■□□□□ 0.44
RAVER1-204ENST00000592208 UGGT2Q9NYU1 1516 aa17.8■□□□□ 0.44
RAVER1-204ENST00000592208 SMG6Q86US8 1419 aaKnown RBP17.8■□□□□ 0.44
RAVER1-204ENST00000592208 BECN2A8MW95 431 aa17.8■□□□□ 0.44
RAVER1-204ENST00000592208 CHMP5Q9NZZ3 219 aa17.8■□□□□ 0.44
RAVER1-204ENST00000592208 PTPN23Q9H3S7 1636 aa17.8■□□□□ 0.44
RAVER1-204ENST00000592208 PNISRQ8TF01 805 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms