RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 CCDC7Q96M83 1385 aa7.92□□□□□ -1.14
SMAD4-212ENST00000591126 CABP4P57796 275 aa7.92□□□□□ -1.14
SMAD4-212ENST00000591126 NUP153P49790 1475 aaKnown RBP7.92□□□□□ -1.14
SMAD4-212ENST00000591126 NLRP1Q9C000 1473 aa7.92□□□□□ -1.14
SMAD4-212ENST00000591126 IDI1Q13907 227 aa7.92□□□□□ -1.14
SMAD4-212ENST00000591126 BRD4O60885 1362 aaPredicted RBP7.92□□□□□ -1.14
SMAD4-212ENST00000591126 TULP1O00294 542 aaPredicted RBP7.92□□□□□ -1.14
SMAD4-212ENST00000591126 CCER2I3L3R5 266 aa7.91□□□□□ -1.14
SMAD4-212ENST00000591126 HSP90AB4PQ58FF6 505 aa7.91□□□□□ -1.14
SMAD4-212ENST00000591126 NUDT16Q96DE0 195 aaKnown RBP7.91□□□□□ -1.14
SMAD4-212ENST00000591126 HIRIP3Q9BW71 556 aaPredicted RBP7.91□□□□□ -1.14
SMAD4-212ENST00000591126 USP47Q96K76 1375 aa7.91□□□□□ -1.14
SMAD4-212ENST00000591126 GNAI1P63096 354 aa7.91□□□□□ -1.14
SMAD4-212ENST00000591126 FGD1P98174 961 aa7.91□□□□□ -1.14
SMAD4-212ENST00000591126 TRPM2O94759 1503 aa7.9□□□□□ -1.14
SMAD4-212ENST00000591126 HSP90AB3PQ58FF7 597 aa7.9□□□□□ -1.14
SMAD4-212ENST00000591126 VPS37DQ86XT2 251 aa7.9□□□□□ -1.14
SMAD4-212ENST00000591126 PCF11O94913 1555 aaKnown RBP7.9□□□□□ -1.15
SMAD4-212ENST00000591126 CHMP3Q9Y3E7 222 aa7.9□□□□□ -1.15
SMAD4-212ENST00000591126 PIK3R4Q99570 1358 aa7.89□□□□□ -1.15
SMAD4-212ENST00000591126 WASLO00401 505 aaPredicted RBP7.89□□□□□ -1.15
SMAD4-212ENST00000591126 FLAD1Q8NFF5 587 aa7.89□□□□□ -1.15
SMAD4-212ENST00000591126 SIRT1Q96EB6 747 aa7.89□□□□□ -1.15
SMAD4-212ENST00000591126 SALL2Q9Y467 1007 aaPredicted RBP7.89□□□□□ -1.15
SMAD4-212ENST00000591126 YEATS2Q9ULM3 1422 aa7.89□□□□□ -1.15
SMAD4-212ENST00000591126 C16orf71Q8IYS4 520 aaPredicted RBP7.89□□□□□ -1.15
SMAD4-212ENST00000591126 ARAP3Q8WWN8 1544 aa7.89□□□□□ -1.15
SMAD4-212ENST00000591126 ST20-MTHFSA0A0A6YYL1 179 aa7.89□□□□□ -1.15
SMAD4-212ENST00000591126 ADAMTS2O95450 1211 aa7.89□□□□□ -1.15
SMAD4-212ENST00000591126 CFAP70Q5T0N1 1121 aa7.89□□□□□ -1.15
SMAD4-212ENST00000591126 GNL3LQ9NVN8 582 aaKnown RBP7.89□□□□□ -1.15
SMAD4-212ENST00000591126 STK32BQ9NY57 414 aa7.89□□□□□ -1.15
SMAD4-212ENST00000591126 ZPR1O75312 459 aa7.89□□□□□ -1.15
SMAD4-212ENST00000591126 NCLP19338 710 aaKnown RBP7.89□□□□□ -1.15
SMAD4-212ENST00000591126 RTL5Q5HYW3 569 aaPredicted RBP7.89□□□□□ -1.15
SMAD4-212ENST00000591126 PTPN23Q9H3S7 1636 aa7.88□□□□□ -1.15
SMAD4-212ENST00000591126 ABCA8O94911 1581 aa7.88□□□□□ -1.15
SMAD4-212ENST00000591126 ABCC5O15440 1437 aa7.88□□□□□ -1.15
SMAD4-212ENST00000591126 KIAA1211Q6ZU35 1233 aa7.88□□□□□ -1.15
SMAD4-212ENST00000591126 BCL11BQ9C0K0 894 aaPredicted RBP7.88□□□□□ -1.15
SMAD4-212ENST00000591126 MYBBP1AQ9BQG0 1328 aaKnown RBP7.88□□□□□ -1.15
SMAD4-212ENST00000591126 PMFBP1Q8TBY8 1022 aa7.88□□□□□ -1.15
SMAD4-212ENST00000591126 CCDC34Q96HJ3 373 aa7.88□□□□□ -1.15
SMAD4-212ENST00000591126 NSD2O96028 1365 aa7.88□□□□□ -1.15
SMAD4-212ENST00000591126 NCKAP5LQ9HCH0 1330 aa7.88□□□□□ -1.15
SMAD4-212ENST00000591126 ANP32BQ92688 251 aaKnown RBP7.88□□□□□ -1.15
SMAD4-212ENST00000591126 API5Q9BZZ5 524 aaKnown RBP7.88□□□□□ -1.15
SMAD4-212ENST00000591126 TMOD3Q9NYL9 352 aa7.88□□□□□ -1.15
SMAD4-212ENST00000591126 ISY1Q9ULR0 285 aaKnown RBP7.88□□□□□ -1.15
SMAD4-212ENST00000591126 MLH3Q9UHC1 1453 aa7.88□□□□□ -1.15
SMAD4-212ENST00000591126 TTC21BQ7Z4L5 1316 aa7.87□□□□□ -1.15
SMAD4-212ENST00000591126 DISP1Q96F81 1524 aa7.87□□□□□ -1.15
SMAD4-212ENST00000591126 ZRSR1Q15695 479 aaKnown RBP7.87□□□□□ -1.15
SMAD4-212ENST00000591126 ANP32EQ9BTT0 268 aa7.87□□□□□ -1.15
SMAD4-212ENST00000591126 TRPC5Q9UL62 973 aaPredicted RBP7.87□□□□□ -1.15
SMAD4-212ENST00000591126 ATP7AQ04656 1500 aa7.87□□□□□ -1.15
SMAD4-212ENST00000591126 FBXO31Q5XUX0 539 aaPredicted RBP7.87□□□□□ -1.15
SMAD4-212ENST00000591126 AK7Q96M32 723 aa7.87□□□□□ -1.15
SMAD4-212ENST00000591126 RBM42Q9BTD8 480 aaKnown RBP7.87□□□□□ -1.15
SMAD4-212ENST00000591126 PANK3Q9H999 370 aa7.87□□□□□ -1.15
SMAD4-212ENST00000591126 CHD1O14646 1710 aa7.87□□□□□ -1.15
SMAD4-212ENST00000591126 CCDC136Q96JN2 1154 aa7.87□□□□□ -1.15
SMAD4-212ENST00000591126 C14orf93Q9H972 538 aaKnown RBP7.87□□□□□ -1.15
SMAD4-212ENST00000591126 NPATQ14207 1427 aa7.86□□□□□ -1.15
SMAD4-212ENST00000591126 ANP32AP39687 249 aaKnown RBP7.86□□□□□ -1.15
SMAD4-212ENST00000591126 TMEM132EQ6IEE7 984 aa7.86□□□□□ -1.15
SMAD4-212ENST00000591126 HSPA2P54652 639 aa7.86□□□□□ -1.15
SMAD4-212ENST00000591126 CABP2Q9NPB3 220 aa7.86□□□□□ -1.15
SMAD4-212ENST00000591126 USP35Q9P2H5 1018 aa7.86□□□□□ -1.15
SMAD4-212ENST00000591126 AAMPQ13685 434 aa7.86□□□□□ -1.15
SMAD4-212ENST00000591126 NPHP4O75161 1426 aaPredicted RBP7.85□□□□□ -1.15
SMAD4-212ENST00000591126 SYCP2Q9BX26 1530 aa7.85□□□□□ -1.15
SMAD4-212ENST00000591126 C9orf78Q9NZ63 289 aaPredicted RBP7.85□□□□□ -1.15
SMAD4-212ENST00000591126 MTHFSP49914 203 aa7.85□□□□□ -1.15
SMAD4-212ENST00000591126 CCDC30Q5VVM6 783 aa7.85□□□□□ -1.15
SMAD4-212ENST00000591126 C8orf37Q96NL8 207 aa7.85□□□□□ -1.15
SMAD4-212ENST00000591126 BECN1Q14457 450 aa7.84□□□□□ -1.15
SMAD4-212ENST00000591126 TMOD2Q9NZR1 351 aa7.84□□□□□ -1.15
SMAD4-212ENST00000591126 ZNF530Q6P9A1 599 aaPredicted RBP7.84□□□□□ -1.15
SMAD4-212ENST00000591126 CERKQ8TCT0 537 aa7.84□□□□□ -1.15
SMAD4-212ENST00000591126 KIF3AQ9Y496 699 aa7.84□□□□□ -1.15
SMAD4-212ENST00000591126 RXRBP28702 533 aa7.84□□□□□ -1.15
SMAD4-212ENST00000591126 CCAR1Q8IX12 1150 aaKnown RBP7.84□□□□□ -1.15
SMAD4-212ENST00000591126 RUNDC1Q96C34 613 aa7.84□□□□□ -1.15
SMAD4-212ENST00000591126 CABP1Q9NZU7 370 aa7.84□□□□□ -1.15
SMAD4-212ENST00000591126 DDX54Q8TDD1 881 aaKnown RBP7.84□□□□□ -1.15
SMAD4-212ENST00000591126 SLAIN2Q9P270 581 aa7.84□□□□□ -1.15
SMAD4-212ENST00000591126 DDB1Q16531 1140 aa7.83□□□□□ -1.16
SMAD4-212ENST00000591126 RIC3Q7Z5B4 369 aa7.83□□□□□ -1.16
SMAD4-212ENST00000591126 RWDD1Q9H446 243 aaPredicted RBP7.83□□□□□ -1.16
SMAD4-212ENST00000591126 TSPYL4Q9UJ04 414 aa7.83□□□□□ -1.16
SMAD4-212ENST00000591126 FOXO3O43524 673 aa7.83□□□□□ -1.16
SMAD4-212ENST00000591126 E9PSI1 815 aa7.83□□□□□ -1.16
SMAD4-212ENST00000591126 FRAT1Q92837 279 aaPredicted RBP7.83□□□□□ -1.16
SMAD4-212ENST00000591126 TMEM2Q9UHN6 1383 aa7.83□□□□□ -1.16
SMAD4-212ENST00000591126 ZRANB1Q9UGI0 708 aa7.82□□□□□ -1.16
SMAD4-212ENST00000591126 IFNL2Q8IZJ0 200 aa7.82□□□□□ -1.16
SMAD4-212ENST00000591126 HTATSF1O43719 755 aaKnown RBP7.82□□□□□ -1.16
SMAD4-212ENST00000591126 SLF2Q8IX21 1173 aa7.82□□□□□ -1.16
SMAD4-212ENST00000591126 GOLGA6L22H0YM25 854 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms