RNA–Protein interactions for RNA: ENST00000590930.5

CHUK-204, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

TSL 1 (best)

Gene CHUK, Length 4,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-204ENST00000590930 CCDC27Q2M243 656 aa5.38□□□□□ -1.55
CHUK-204ENST00000590930 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.38□□□□□ -1.55
CHUK-204ENST00000590930 SNX21Q969T3 373 aa5.37□□□□□ -1.55
CHUK-204ENST00000590930 A2MP01023 1474 aa5.37□□□□□ -1.55
CHUK-204ENST00000590930 USP47Q96K76 1375 aa5.37□□□□□ -1.55
CHUK-204ENST00000590930 RTL5Q5HYW3 569 aaPredicted RBP5.37□□□□□ -1.55
CHUK-204ENST00000590930 BCANQ96GW7 911 aa5.37□□□□□ -1.55
CHUK-204ENST00000590930 RTL1A6NKG5 1358 aa5.37□□□□□ -1.55
CHUK-204ENST00000590930 ARHGEF28Q8N1W1 1705 aaKnown RBP5.37□□□□□ -1.55
CHUK-204ENST00000590930 ZFYVE9O95405 1425 aa5.37□□□□□ -1.55
CHUK-204ENST00000590930 SETD1AO15047 1707 aaKnown RBP5.37□□□□□ -1.55
CHUK-204ENST00000590930 HSPA5P11021 654 aaKnown RBP5.36□□□□□ -1.55
CHUK-204ENST00000590930 RBM25P49756 843 aaKnown RBP5.36□□□□□ -1.55
CHUK-204ENST00000590930 EHMT2Q96KQ7 1210 aa5.36□□□□□ -1.55
CHUK-204ENST00000590930 DLC1Q96QB1 1528 aa5.36□□□□□ -1.55
CHUK-204ENST00000590930 NCLP19338 710 aaKnown RBP5.36□□□□□ -1.55
CHUK-204ENST00000590930 NALCNQ8IZF0 1738 aa5.36□□□□□ -1.55
CHUK-204ENST00000590930 PDE3AQ14432 1141 aa5.36□□□□□ -1.55
CHUK-204ENST00000590930 STAG3Q9UJ98 1225 aa5.35□□□□□ -1.55
CHUK-204ENST00000590930 ZFYVE16Q7Z3T8 1539 aa5.35□□□□□ -1.55
CHUK-204ENST00000590930 FAM161AQ3B820 660 aa5.35□□□□□ -1.55
CHUK-204ENST00000590930 COL3A1P02461 1466 aaPredicted RBP5.35□□□□□ -1.55
CHUK-204ENST00000590930 PLEKHD1A6NEE1 506 aa5.35□□□□□ -1.55
CHUK-204ENST00000590930 ZNF500O60304 480 aaPredicted RBP5.35□□□□□ -1.55
CHUK-204ENST00000590930 SKOR2Q2VWA4 1001 aaPredicted RBP5.35□□□□□ -1.55
CHUK-204ENST00000590930 PDE4AP27815 886 aa5.35□□□□□ -1.55
CHUK-204ENST00000590930 FAM69CQ0P6D2 419 aa5.34□□□□□ -1.55
CHUK-204ENST00000590930 NLRP13Q86W25 1043 aa5.34□□□□□ -1.55
CHUK-204ENST00000590930 RGPD1P0DJD0 1748 aa5.34□□□□□ -1.55
CHUK-204ENST00000590930 C8orf34Q49A92 452 aa5.34□□□□□ -1.56
CHUK-204ENST00000590930 USP19O94966 1318 aa5.33□□□□□ -1.56
CHUK-204ENST00000590930 PER1O15534 1290 aaPredicted RBP5.33□□□□□ -1.56
CHUK-204ENST00000590930 PKNOX2Q96KN3 472 aa5.33□□□□□ -1.56
CHUK-204ENST00000590930 KCNH8Q96L42 1107 aa5.33□□□□□ -1.56
CHUK-204ENST00000590930 MRE11P49959 708 aa5.33□□□□□ -1.56
CHUK-204ENST00000590930 RIMS2Q9UQ26 1411 aa5.33□□□□□ -1.56
CHUK-204ENST00000590930 TRAPPC8Q9Y2L5 1435 aa5.33□□□□□ -1.56
CHUK-204ENST00000590930 PHRF1Q9P1Y6 1649 aaKnown RBP5.33□□□□□ -1.56
CHUK-204ENST00000590930 PIK3C2AO00443 1686 aa5.32□□□□□ -1.56
CHUK-204ENST00000590930 TSPOAP1O95153 1857 aa5.32□□□□□ -1.56
CHUK-204ENST00000590930 PRDM4Q9UKN5 801 aa5.32□□□□□ -1.56
CHUK-204ENST00000590930 ABCC6O95255 1503 aa5.32□□□□□ -1.56
CHUK-204ENST00000590930 KCND1Q9NSA2 647 aa5.32□□□□□ -1.56
CHUK-204ENST00000590930 AKAP12Q02952 1782 aa5.32□□□□□ -1.56
CHUK-204ENST00000590930 MON2Q7Z3U7 1717 aa5.32□□□□□ -1.56
CHUK-204ENST00000590930 DDX60Q8IY21 1712 aaKnown RBP5.32□□□□□ -1.56
CHUK-204ENST00000590930 RGS22Q8NE09 1264 aa5.32□□□□□ -1.56
CHUK-204ENST00000590930 PDLIM2Q96JY6 352 aa5.32□□□□□ -1.56
CHUK-204ENST00000590930 MPHOSPH9Q99550 1183 aa5.32□□□□□ -1.56
CHUK-204ENST00000590930 GTPBP4Q9BZE4 634 aaKnown RBP5.32□□□□□ -1.56
CHUK-204ENST00000590930 TOPAZ1Q8N9V7 1692 aa5.32□□□□□ -1.56
CHUK-204ENST00000590930 NUP155O75694 1391 aa5.31□□□□□ -1.56
CHUK-204ENST00000590930 KIF20AO95235 890 aa5.31□□□□□ -1.56
CHUK-204ENST00000590930 IL16Q14005 1332 aa5.31□□□□□ -1.56
CHUK-204ENST00000590930 ERCC6L2Q5T890 1561 aa5.31□□□□□ -1.56
CHUK-204ENST00000590930 ABCC11Q96J66 1382 aa5.31□□□□□ -1.56
CHUK-204ENST00000590930 PLEKHG2Q9H7P9 1386 aa5.31□□□□□ -1.56
CHUK-204ENST00000590930 CACNA1FO60840 1977 aa5.31□□□□□ -1.56
CHUK-204ENST00000590930 DDX11L8A8MPP1 907 aa5.31□□□□□ -1.56
CHUK-204ENST00000590930 PAK3O75914 559 aaPredicted RBP5.31□□□□□ -1.56
CHUK-204ENST00000590930 TDRD9Q8NDG6 1382 aaKnown RBP5.3□□□□□ -1.56
CHUK-204ENST00000590930 ZNF326Q5BKZ1 582 aaKnown RBP5.3□□□□□ -1.56
CHUK-204ENST00000590930 ARHGAP5Q13017 1502 aa5.3□□□□□ -1.56
CHUK-204ENST00000590930 NFKBIBQ15653 356 aa5.3□□□□□ -1.56
CHUK-204ENST00000590930 SPATA31D1Q6ZQQ2 1576 aa5.3□□□□□ -1.56
CHUK-204ENST00000590930 ZNF428Q96B54 188 aa5.3□□□□□ -1.56
CHUK-204ENST00000590930 ADGRL3Q9HAR2 1447 aa5.3□□□□□ -1.56
CHUK-204ENST00000590930 CD109Q6YHK3 1445 aa5.3□□□□□ -1.56
CHUK-204ENST00000590930 ZNF692Q9BU19 519 aaPredicted RBP5.3□□□□□ -1.56
CHUK-204ENST00000590930 LAS1LQ9Y4W2 734 aaKnown RBP5.3□□□□□ -1.56
CHUK-204ENST00000590930 MYH15Q9Y2K3 1946 aa5.3□□□□□ -1.56
CHUK-204ENST00000590930 SMC5Q8IY18 1101 aa5.3□□□□□ -1.56
CHUK-204ENST00000590930 OFD1O75665 1012 aa5.29□□□□□ -1.56
CHUK-204ENST00000590930 ZNF445P59923 1031 aa5.29□□□□□ -1.56
CHUK-204ENST00000590930 DDX10Q13206 875 aaKnown RBP5.29□□□□□ -1.56
CHUK-204ENST00000590930 DYNC1I1O14576 645 aa5.29□□□□□ -1.56
CHUK-204ENST00000590930 DMRT2Q9Y5R5 561 aa5.29□□□□□ -1.56
CHUK-204ENST00000590930 ATP10BO94823 1461 aa5.29□□□□□ -1.56
CHUK-204ENST00000590930 CSPP1Q1MSJ5 1256 aa5.29□□□□□ -1.56
CHUK-204ENST00000590930 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.29□□□□□ -1.56
CHUK-204ENST00000590930 JPH4Q96JJ6 628 aa5.28□□□□□ -1.56
CHUK-204ENST00000590930 PTCH1Q13635 1447 aa5.28□□□□□ -1.56
CHUK-204ENST00000590930 PDIA4P13667 645 aaKnown RBP5.28□□□□□ -1.56
CHUK-204ENST00000590930 CCDC173Q0VFZ6 552 aa5.28□□□□□ -1.56
CHUK-204ENST00000590930 PLEKHG5O94827 1062 aa5.28□□□□□ -1.56
CHUK-204ENST00000590930 TBC1D32Q96NH3 1257 aa5.28□□□□□ -1.56
CHUK-204ENST00000590930 FAM53CQ9NYF3 392 aa5.28□□□□□ -1.56
CHUK-204ENST00000590930 POGZQ7Z3K3 1410 aa5.28□□□□□ -1.56
CHUK-204ENST00000590930 NOS1P29475 1434 aa5.28□□□□□ -1.56
CHUK-204ENST00000590930 BECN1Q14457 450 aa5.28□□□□□ -1.56
CHUK-204ENST00000590930 PARP4Q9UKK3 1724 aaKnown RBP5.28□□□□□ -1.56
CHUK-204ENST00000590930 RCAN3Q9UKA8 241 aa5.27□□□□□ -1.57
CHUK-204ENST00000590930 HDGFP51858 240 aaKnown RBP5.27□□□□□ -1.57
CHUK-204ENST00000590930 HNRNPUQ00839 825 aaKnown RBP eCLIP5.27□□□□□ -1.57
CHUK-204ENST00000590930 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.27□□□□□ -1.57
CHUK-204ENST00000590930 MSL3Q8N5Y2 521 aaKnown RBP5.27□□□□□ -1.57
CHUK-204ENST00000590930 CPSF1Q10570 1443 aaKnown RBP5.27□□□□□ -1.57
CHUK-204ENST00000590930 PXDNLA1KZ92 1463 aa5.27□□□□□ -1.57
CHUK-204ENST00000590930 ADAMTS7Q9UKP4 1686 aa5.27□□□□□ -1.57
CHUK-204ENST00000590930 DCAF8L1A6NGE4 600 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms