RNA–Protein interactions for RNA: ENST00000590599.1

CTDP1-205, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 2

Gene CTDP1, Length 1,762 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-205ENST00000590599 POGKQ9P215 609 aa24.89■■□□□ 1.57
CTDP1-205ENST00000590599 DIP2AQ14689 1571 aa24.89■■□□□ 1.57
CTDP1-205ENST00000590599 MYOM1P52179 1685 aa24.88■■□□□ 1.57
CTDP1-205ENST00000590599 PRAM1Q96QH2 718 aa24.88■■□□□ 1.57
CTDP1-205ENST00000590599 SAFB2Q14151 953 aaKnown RBP eCLIP24.87■■□□□ 1.57
CTDP1-205ENST00000590599 CHD2O14647 1828 aaKnown RBP24.86■■□□□ 1.57
CTDP1-205ENST00000590599 TULP4Q9NRJ4 1543 aa24.85■■□□□ 1.57
CTDP1-205ENST00000590599 EVC2Q86UK5 1308 aa24.85■■□□□ 1.57
CTDP1-205ENST00000590599 TECPR2O15040 1411 aa24.85■■□□□ 1.57
CTDP1-205ENST00000590599 PIP4K2BP78356 416 aa24.84■■□□□ 1.57
CTDP1-205ENST00000590599 CCER2I3L3R5 266 aa24.82■■□□□ 1.56
CTDP1-205ENST00000590599 SCAF1Q9H7N4 1312 aaKnown RBP24.82■■□□□ 1.56
CTDP1-205ENST00000590599 TBX22Q9Y458 520 aa24.82■■□□□ 1.56
CTDP1-205ENST00000590599 PRKRIP1Q9H875 184 aaPredicted RBP24.81■■□□□ 1.56
CTDP1-205ENST00000590599 PANK3Q9H999 370 aa24.81■■□□□ 1.56
CTDP1-205ENST00000590599 FAM135BQ49AJ0 1406 aa24.8■■□□□ 1.56
CTDP1-205ENST00000590599 MINK1Q8N4C8 1332 aaPredicted RBP24.8■■□□□ 1.56
CTDP1-205ENST00000590599 KCNA6P17658 529 aa24.8■■□□□ 1.56
CTDP1-205ENST00000590599 NWD1Q149M9 1564 aa24.79■■□□□ 1.56
CTDP1-205ENST00000590599 SIRT1Q96EB6 747 aa24.78■■□□□ 1.56
CTDP1-205ENST00000590599 PUS7Q96PZ0 661 aaKnown RBP24.78■■□□□ 1.56
CTDP1-205ENST00000590599 PLEKHH1Q9ULM0 1364 aa24.78■■□□□ 1.56
CTDP1-205ENST00000590599 WAPLQ7Z5K2 1190 aa24.77■■□□□ 1.56
CTDP1-205ENST00000590599 TMEM94Q12767 1356 aa24.76■■□□□ 1.55
CTDP1-205ENST00000590599 PROSER2Q86WR7 435 aaPredicted RBP24.75■■□□□ 1.55
CTDP1-205ENST00000590599 PER1O15534 1290 aaPredicted RBP24.75■■□□□ 1.55
CTDP1-205ENST00000590599 PTPRUQ92729 1446 aa24.74■■□□□ 1.55
CTDP1-205ENST00000590599 TOM1O60784 492 aa24.74■■□□□ 1.55
CTDP1-205ENST00000590599 SRPK2P78362 688 aaKnown RBP24.74■■□□□ 1.55
CTDP1-205ENST00000590599 CNGB1Q14028 1251 aaPredicted RBP24.73■■□□□ 1.55
CTDP1-205ENST00000590599 ROBO2Q9HCK4 1378 aa24.73■■□□□ 1.55
CTDP1-205ENST00000590599 PIK3R4Q99570 1358 aa24.72■■□□□ 1.55
CTDP1-205ENST00000590599 CABP2Q9NPB3 220 aa24.72■■□□□ 1.55
CTDP1-205ENST00000590599 KTN1Q86UP2 1357 aaKnown RBP24.72■■□□□ 1.55
CTDP1-205ENST00000590599 TMC1Q8TDI8 760 aa24.72■■□□□ 1.55
CTDP1-205ENST00000590599 XRN1Q8IZH2 1706 aaKnown RBP24.71■■□□□ 1.55
CTDP1-205ENST00000590599 PTCH1Q13635 1447 aa24.71■■□□□ 1.55
CTDP1-205ENST00000590599 ATAD2Q6PL18 1390 aa24.7■■□□□ 1.55
CTDP1-205ENST00000590599 YTHDC1Q96MU7 727 aaKnown RBP24.7■■□□□ 1.55
CTDP1-205ENST00000590599 AMOTL2Q9Y2J4 779 aa24.7■■□□□ 1.55
CTDP1-205ENST00000590599 KNSTRNQ9Y448 316 aa24.7■■□□□ 1.55
CTDP1-205ENST00000590599 NKTRP30414 1462 aaKnown RBP24.69■■□□□ 1.54
CTDP1-205ENST00000590599 HSPA1LP34931 641 aa24.69■■□□□ 1.54
CTDP1-205ENST00000590599 NINLQ9Y2I6 1382 aa24.68■■□□□ 1.54
CTDP1-205ENST00000590599 CDK19Q9BWU1 502 aa24.68■■□□□ 1.54
CTDP1-205ENST00000590599 RALBP1Q15311 655 aa24.67■■□□□ 1.54
CTDP1-205ENST00000590599 ADGRB2O60241 1585 aa24.66■■□□□ 1.54
CTDP1-205ENST00000590599 SLC12A5Q9H2X9 1139 aa24.66■■□□□ 1.54
CTDP1-205ENST00000590599 PARD3Q8TEW0 1356 aa24.64■■□□□ 1.54
CTDP1-205ENST00000590599 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.64■■□□□ 1.54
CTDP1-205ENST00000590599 CC2D1BQ5T0F9 858 aaKnown RBP24.64■■□□□ 1.53
CTDP1-205ENST00000590599 WASLO00401 505 aaPredicted RBP24.63■■□□□ 1.53
CTDP1-205ENST00000590599 ANKRD36BQ8N2N9 1353 aa24.62■■□□□ 1.53
CTDP1-205ENST00000590599 MYBBP1AQ9BQG0 1328 aaKnown RBP24.61■■□□□ 1.53
CTDP1-205ENST00000590599 NPC1L1Q9UHC9 1359 aa24.6■■□□□ 1.53
CTDP1-205ENST00000590599 AMER1Q5JTC6 1135 aaPredicted RBP24.6■■□□□ 1.53
CTDP1-205ENST00000590599 MRS2Q9HD23 443 aa24.6■■□□□ 1.53
CTDP1-205ENST00000590599 NSD3Q9BZ95 1437 aa24.6■■□□□ 1.53
CTDP1-205ENST00000590599 CARD14Q9BXL6 1004 aa24.59■■□□□ 1.53
CTDP1-205ENST00000590599 USP32Q8NFA0 1604 aa24.58■■□□□ 1.53
CTDP1-205ENST00000590599 ROBO1Q9Y6N7 1651 aa24.58■■□□□ 1.53
CTDP1-205ENST00000590599 CCDC184Q52MB2 194 aa24.56■■□□□ 1.52
CTDP1-205ENST00000590599 C14orf37Q86TY3 774 aa24.56■■□□□ 1.52
CTDP1-205ENST00000590599 TERF2IPQ9NYB0 399 aa24.56■■□□□ 1.52
CTDP1-205ENST00000590599 MSH6P52701 1360 aa24.56■■□□□ 1.52
CTDP1-205ENST00000590599 A0A1W2PP64 1363 aa24.55■■□□□ 1.52
CTDP1-205ENST00000590599 ATP7BP35670 1465 aa24.54■■□□□ 1.52
CTDP1-205ENST00000590599 PPIP5K1Q6PFW1 1433 aa24.53■■□□□ 1.52
CTDP1-205ENST00000590599 HDGFL2Q7Z4V5 671 aaPredicted RBP24.52■■□□□ 1.52
CTDP1-205ENST00000590599 NLRP13Q86W25 1043 aa24.52■■□□□ 1.52
CTDP1-205ENST00000590599 NUDT16Q96DE0 195 aaKnown RBP24.52■■□□□ 1.52
CTDP1-205ENST00000590599 CABP1Q9NZU7 370 aa24.52■■□□□ 1.52
CTDP1-205ENST00000590599 CD163L1Q9NR16 1453 aa24.52■■□□□ 1.52
CTDP1-205ENST00000590599 NALCNQ8IZF0 1738 aa24.52■■□□□ 1.52
CTDP1-205ENST00000590599 BRD4O60885 1362 aaPredicted RBP24.52■■□□□ 1.52
CTDP1-205ENST00000590599 CENPBP07199 599 aaPredicted RBP24.52■■□□□ 1.52
CTDP1-205ENST00000590599 CGNL1Q0VF96 1302 aa24.5■■□□□ 1.51
CTDP1-205ENST00000590599 SLAIN2Q9P270 581 aa24.49■■□□□ 1.51
CTDP1-205ENST00000590599 CCDC61Q9Y6R9 512 aa24.49■■□□□ 1.51
CTDP1-205ENST00000590599 TOPAZ1Q8N9V7 1692 aa24.49■■□□□ 1.51
CTDP1-205ENST00000590599 CDC42BPGQ6DT37 1551 aa24.47■■□□□ 1.51
CTDP1-205ENST00000590599 ITSN1Q15811 1721 aa24.47■■□□□ 1.51
CTDP1-205ENST00000590599 PRR36Q9H6K5 1346 aa24.47■■□□□ 1.51
CTDP1-205ENST00000590599 C19orf44Q9H6X5 657 aa24.47■■□□□ 1.51
CTDP1-205ENST00000590599 NSD2O96028 1365 aa24.46■■□□□ 1.51
CTDP1-205ENST00000590599 NCOA3Q9Y6Q9 1424 aa24.45■■□□□ 1.5
CTDP1-205ENST00000590599 FMN2Q9NZ56 1722 aa24.44■■□□□ 1.5
CTDP1-205ENST00000590599 FAM9BQ8IZU0 186 aa24.44■■□□□ 1.5
CTDP1-205ENST00000590599 AKAP12Q02952 1782 aa24.43■■□□□ 1.5
CTDP1-205ENST00000590599 PPP2R1AP30153 589 aa24.43■■□□□ 1.5
CTDP1-205ENST00000590599 CPSF1Q10570 1443 aaKnown RBP24.43■■□□□ 1.5
CTDP1-205ENST00000590599 ATF3P18847 181 aa24.42■■□□□ 1.5
CTDP1-205ENST00000590599 MON2Q7Z3U7 1717 aa24.42■■□□□ 1.5
CTDP1-205ENST00000590599 ADGRL3Q9HAR2 1447 aa24.42■■□□□ 1.5
CTDP1-205ENST00000590599 KIF20BQ96Q89 1820 aa24.42■■□□□ 1.5
CTDP1-205ENST00000590599 PHLPP1O60346 1717 aa24.42■■□□□ 1.5
CTDP1-205ENST00000590599 NUTM2FA1L443 756 aa24.42■■□□□ 1.5
CTDP1-205ENST00000590599 MORC1Q86VD1 984 aa24.42■■□□□ 1.5
CTDP1-205ENST00000590599 ANKRD26Q9UPS8 1709 aa24.41■■□□□ 1.5
CTDP1-205ENST00000590599 MED1Q15648 1581 aaPredicted RBP24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms