RNA–Protein interactions for RNA: ENST00000590494.1

TMC6-215, Transcript of transmembrane channel like 6, humanhuman

TSL 2

Gene TMC6, Length 702 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-215ENST00000590494 NINLQ9Y2I6 1382 aa17.5■□□□□ 0.39
TMC6-215ENST00000590494 MYO5BQ9ULV0 1848 aa17.49■□□□□ 0.39
TMC6-215ENST00000590494 EN1Q05925 392 aaPredicted RBP17.49■□□□□ 0.39
TMC6-215ENST00000590494 SEPT12Q8IYM1 358 aa17.49■□□□□ 0.39
TMC6-215ENST00000590494 CEP350Q5VT06 3117 aa17.48■□□□□ 0.39
TMC6-215ENST00000590494 NUP155O75694 1391 aa17.48■□□□□ 0.39
TMC6-215ENST00000590494 SOS2Q07890 1332 aaPredicted RBP17.47■□□□□ 0.39
TMC6-215ENST00000590494 RGPD1P0DJD0 1748 aa17.47■□□□□ 0.39
TMC6-215ENST00000590494 RIMS2Q9UQ26 1411 aa17.47■□□□□ 0.39
TMC6-215ENST00000590494 TRIM26Q12899 539 aaPredicted RBP17.45■□□□□ 0.38
TMC6-215ENST00000590494 KRT27Q7Z3Y8 459 aa17.45■□□□□ 0.38
TMC6-215ENST00000590494 AMOTL2Q9Y2J4 779 aa17.45■□□□□ 0.38
TMC6-215ENST00000590494 NOS1P29475 1434 aa17.45■□□□□ 0.38
TMC6-215ENST00000590494 PTPRUQ92729 1446 aa17.45■□□□□ 0.38
TMC6-215ENST00000590494 UNC5CLQ8IV45 518 aa17.44■□□□□ 0.38
TMC6-215ENST00000590494 ACIN1Q9UKV3 1341 aaKnown RBP17.44■□□□□ 0.38
TMC6-215ENST00000590494 DISP2A7MBM2 1401 aa17.43■□□□□ 0.38
TMC6-215ENST00000590494 SLIT2O94813 1529 aa17.42■□□□□ 0.38
TMC6-215ENST00000590494 RAB3GAP2Q9H2M9 1393 aa17.42■□□□□ 0.38
TMC6-215ENST00000590494 XRN1Q8IZH2 1706 aaKnown RBP17.42■□□□□ 0.38
TMC6-215ENST00000590494 HDGFP51858 240 aaKnown RBP17.42■□□□□ 0.38
TMC6-215ENST00000590494 PPP1R1BQ9UD71 204 aaPredicted RBP17.42■□□□□ 0.38
TMC6-215ENST00000590494 RPRD2Q5VT52 1461 aaKnown RBP17.42■□□□□ 0.38
TMC6-215ENST00000590494 TNS1Q9HBL0 1735 aaKnown RBP17.41■□□□□ 0.38
TMC6-215ENST00000590494 CHD4Q14839 1912 aa17.41■□□□□ 0.38
TMC6-215ENST00000590494 E9PCH4 1651 aa17.4■□□□□ 0.38
TMC6-215ENST00000590494 C1orf167Q5SNV9 1468 aa17.4■□□□□ 0.38
TMC6-215ENST00000590494 SLC52A1Q9NWF4 448 aa17.4■□□□□ 0.38
TMC6-215ENST00000590494 ADGRL3Q9HAR2 1447 aa17.39■□□□□ 0.38
TMC6-215ENST00000590494 NALCNQ8IZF0 1738 aa17.39■□□□□ 0.37
TMC6-215ENST00000590494 ONECUT3O60422 494 aaPredicted RBP17.39■□□□□ 0.37
TMC6-215ENST00000590494 TMEM131LA2VDJ0 1609 aa17.38■□□□□ 0.37
TMC6-215ENST00000590494 EZH2Q15910 746 aaKnown RBP17.36■□□□□ 0.37
TMC6-215ENST00000590494 SPON1Q9HCB6 807 aa17.36■□□□□ 0.37
TMC6-215ENST00000590494 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.34■□□□□ 0.37
TMC6-215ENST00000590494 SLC4A1APQ9BWU0 796 aaKnown RBP17.34■□□□□ 0.37
TMC6-215ENST00000590494 GIGYF1O75420 1035 aaPredicted RBP17.33■□□□□ 0.36
TMC6-215ENST00000590494 VPS72Q15906 364 aa17.32■□□□□ 0.36
TMC6-215ENST00000590494 ORAI2Q96SN7 254 aa17.32■□□□□ 0.36
TMC6-215ENST00000590494 KCNQ2O43526 872 aa17.31■□□□□ 0.36
TMC6-215ENST00000590494 CAMKK2Q96RR4 588 aa17.31■□□□□ 0.36
TMC6-215ENST00000590494 ADGRB2O60241 1585 aa17.31■□□□□ 0.36
TMC6-215ENST00000590494 RREB1Q92766 1687 aa17.3■□□□□ 0.36
TMC6-215ENST00000590494 MPHOSPH9Q99550 1183 aa17.3■□□□□ 0.36
TMC6-215ENST00000590494 UTRNP46939 3433 aa17.3■□□□□ 0.36
TMC6-215ENST00000590494 SLC34A2O95436 690 aa17.29■□□□□ 0.36
TMC6-215ENST00000590494 NUP188Q5SRE5 1749 aa17.29■□□□□ 0.36
TMC6-215ENST00000590494 PXDNQ92626 1479 aa17.27■□□□□ 0.36
TMC6-215ENST00000590494 USP32Q8NFA0 1604 aa17.27■□□□□ 0.36
TMC6-215ENST00000590494 NWD2Q9ULI1 1742 aa17.27■□□□□ 0.35
TMC6-215ENST00000590494 PARD3Q8TEW0 1356 aa17.27■□□□□ 0.35
TMC6-215ENST00000590494 PLCH1Q4KWH8 1693 aa17.26■□□□□ 0.35
TMC6-215ENST00000590494 NRXN3Q9Y4C0 1643 aa17.25■□□□□ 0.35
TMC6-215ENST00000590494 CCDC9Q9Y3X0 531 aaKnown RBP17.25■□□□□ 0.35
TMC6-215ENST00000590494 A0A0G2JS52 829 aa17.24■□□□□ 0.35
TMC6-215ENST00000590494 MYT1Q01538 1121 aa17.24■□□□□ 0.35
TMC6-215ENST00000590494 FAM182BQ5T319 152 aa17.24■□□□□ 0.35
TMC6-215ENST00000590494 NRKQ7Z2Y5 1582 aa17.23■□□□□ 0.35
TMC6-215ENST00000590494 NPHP3Q7Z494 1330 aa17.21■□□□□ 0.35
TMC6-215ENST00000590494 CLTCL1P53675 1640 aa17.21■□□□□ 0.35
TMC6-215ENST00000590494 NBPF8Q3BBV2 869 aa17.21■□□□□ 0.35
TMC6-215ENST00000590494 NBPF14Q5TI25 921 aa17.21■□□□□ 0.35
TMC6-215ENST00000590494 PCGF6Q9BYE7 350 aa17.21■□□□□ 0.35
TMC6-215ENST00000590494 MYOM1P52179 1685 aa17.2■□□□□ 0.34
TMC6-215ENST00000590494 FAM98CQ17RN3 349 aaKnown RBP17.19■□□□□ 0.34
TMC6-215ENST00000590494 KIF1BO60333 1816 aa17.19■□□□□ 0.34
TMC6-215ENST00000590494 METP08581 1390 aa17.18■□□□□ 0.34
TMC6-215ENST00000590494 CCDC144AA2RUR9 1427 aa17.17■□□□□ 0.34
TMC6-215ENST00000590494 CHGAP10645 457 aaKnown RBP17.17■□□□□ 0.34
TMC6-215ENST00000590494 XPCQ01831 940 aaPredicted RBP17.16■□□□□ 0.34
TMC6-215ENST00000590494 TRIM37O94972 964 aa17.15■□□□□ 0.34
TMC6-215ENST00000590494 APBA3O96018 575 aa17.15■□□□□ 0.34
TMC6-215ENST00000590494 CAPN15O75808 1086 aa17.14■□□□□ 0.33
TMC6-215ENST00000590494 CASZ1Q86V15 1759 aa17.14■□□□□ 0.33
TMC6-215ENST00000590494 ANKRD30BQ9BXX2 1392 aa17.14■□□□□ 0.33
TMC6-215ENST00000590494 THSD7AQ9UPZ6 1657 aa17.13■□□□□ 0.33
TMC6-215ENST00000590494 NRAPQ86VF7 1730 aa17.13■□□□□ 0.33
TMC6-215ENST00000590494 SHANK3Q9BYB0 1731 aa17.13■□□□□ 0.33
TMC6-215ENST00000590494 FOXO3O43524 673 aa17.11■□□□□ 0.33
TMC6-215ENST00000590494 DHX57Q6P158 1386 aaKnown RBP17.11■□□□□ 0.33
TMC6-215ENST00000590494 HSPA6P17066 643 aa17.1■□□□□ 0.33
TMC6-215ENST00000590494 ESCO1Q5FWF5 840 aa17.1■□□□□ 0.33
TMC6-215ENST00000590494 SYT17Q9BSW7 474 aa17.1■□□□□ 0.33
TMC6-215ENST00000590494 PCDH10Q9P2E7 1040 aa17.09■□□□□ 0.33
TMC6-215ENST00000590494 SPATA31A3Q5VYP0 1347 aa17.09■□□□□ 0.33
TMC6-215ENST00000590494 ABCA3Q99758 1704 aa17.08■□□□□ 0.32
TMC6-215ENST00000590494 DLC1Q96QB1 1528 aa17.08■□□□□ 0.32
TMC6-215ENST00000590494 ZNF326Q5BKZ1 582 aaKnown RBP17.08■□□□□ 0.32
TMC6-215ENST00000590494 FHDC1Q9C0D6 1143 aaPredicted RBP17.08■□□□□ 0.32
TMC6-215ENST00000590494 NEXMIFQ5QGS0 1516 aa17.07■□□□□ 0.32
TMC6-215ENST00000590494 SPATA31E1Q6ZUB1 1445 aa17.07■□□□□ 0.32
TMC6-215ENST00000590494 LRPPRCP42704 1394 aaKnown RBP17.07■□□□□ 0.32
TMC6-215ENST00000590494 FAM83GA6ND36 823 aa17.07■□□□□ 0.32
TMC6-215ENST00000590494 PTGER2P43116 358 aa17.07■□□□□ 0.32
TMC6-215ENST00000590494 FAM196AQ6ZSG2 479 aa17.07■□□□□ 0.32
TMC6-215ENST00000590494 PRELPP51888 382 aa17.06■□□□□ 0.32
TMC6-215ENST00000590494 HAP1P54257 671 aaPredicted RBP17.06■□□□□ 0.32
TMC6-215ENST00000590494 PPLO60437 1756 aa17.05■□□□□ 0.32
TMC6-215ENST00000590494 RPGRIP1LQ68CZ1 1315 aa17.04■□□□□ 0.32
TMC6-215ENST00000590494 ROBO2Q9HCK4 1378 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms