RNA–Protein interactions for RNA: ENST00000590485.1

SAFB-208, Transcript of scaffold attachment factor B, humanhuman

TSL 3

Gene SAFB, Length 548 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-208ENST00000590485 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.02□□□□□ -0.97
SAFB-208ENST00000590485 APLP1P51693 650 aa9□□□□□ -0.97
SAFB-208ENST00000590485 GUCA2AQ02747 115 aa8.99□□□□□ -0.97
SAFB-208ENST00000590485 PRPF38BQ5VTL8 546 aaKnown RBP8.99□□□□□ -0.97
SAFB-208ENST00000590485 HLA-CQ95604 372 aa8.99□□□□□ -0.97
SAFB-208ENST00000590485 ZBTB3Q9H5J0 574 aa8.99□□□□□ -0.97
SAFB-208ENST00000590485 PCDHB3Q9Y5E6 796 aa8.99□□□□□ -0.97
SAFB-208ENST00000590485 NUTM2BA6NNL0 878 aaPredicted RBP8.98□□□□□ -0.97
SAFB-208ENST00000590485 NUTM2EB1AL46 878 aaPredicted RBP8.98□□□□□ -0.97
SAFB-208ENST00000590485 Q3C1V9 767 aa8.98□□□□□ -0.97
SAFB-208ENST00000590485 TJAP1Q5JTD0 557 aa8.98□□□□□ -0.97
SAFB-208ENST00000590485 NUTM2DQ5VT03 806 aaPredicted RBP8.98□□□□□ -0.97
SAFB-208ENST00000590485 NUTM2AQ8IVF1 878 aaPredicted RBP8.98□□□□□ -0.97
SAFB-208ENST00000590485 V9GY48 417 aaPredicted RBP8.98□□□□□ -0.97
SAFB-208ENST00000590485 PUS10Q3MIT2 529 aaKnown RBP8.97□□□□□ -0.97
SAFB-208ENST00000590485 MORN1Q5T089 497 aa8.97□□□□□ -0.97
SAFB-208ENST00000590485 C14orf37Q86TY3 774 aa8.97□□□□□ -0.97
SAFB-208ENST00000590485 PCDHB15Q9Y5E8 787 aa8.97□□□□□ -0.97
SAFB-208ENST00000590485 C6orf229H3BNL8 230 aa8.96□□□□□ -0.98
SAFB-208ENST00000590485 LILRB3O75022 631 aa8.96□□□□□ -0.98
SAFB-208ENST00000590485 NR1I2O75469 434 aa8.96□□□□□ -0.98
SAFB-208ENST00000590485 RFC5P40937 340 aa8.96□□□□□ -0.98
SAFB-208ENST00000590485 MTMR2Q13614 643 aa8.96□□□□□ -0.98
SAFB-208ENST00000590485 QPCTQ16769 361 aa8.96□□□□□ -0.98
SAFB-208ENST00000590485 PPP2R2DQ66LE6 453 aa8.96□□□□□ -0.98
SAFB-208ENST00000590485 CABLES1Q8TDN4 633 aa8.96□□□□□ -0.98
SAFB-208ENST00000590485 PCDHGC3Q9UN70 934 aa8.96□□□□□ -0.98
SAFB-208ENST00000590485 FLIIQ13045 1269 aa8.95□□□□□ -0.98
SAFB-208ENST00000590485 SPDYE5A6NIY4 337 aa8.94□□□□□ -0.98
SAFB-208ENST00000590485 HRCP23327 699 aa8.94□□□□□ -0.98
SAFB-208ENST00000590485 TMEM259Q4ZIN3 620 aa8.94□□□□□ -0.98
SAFB-208ENST00000590485 PPP1R18Q6NYC8 613 aa8.94□□□□□ -0.98
SAFB-208ENST00000590485 SLC27A5Q9Y2P5 690 aa8.94□□□□□ -0.98
SAFB-208ENST00000590485 BLOC1S3Q6QNY0 202 aa8.93□□□□□ -0.98
SAFB-208ENST00000590485 PDZRN3Q9UPQ7 1066 aa8.93□□□□□ -0.98
SAFB-208ENST00000590485 RTL5Q5HYW3 569 aaPredicted RBP8.92□□□□□ -0.98
SAFB-208ENST00000590485 AP1G2O75843 785 aa8.91□□□□□ -0.98
SAFB-208ENST00000590485 COPS2P61201 443 aa8.91□□□□□ -0.98
SAFB-208ENST00000590485 BANK1Q8NDB2 785 aa8.91□□□□□ -0.98
SAFB-208ENST00000590485 HELBQ8NG08 1087 aaPredicted RBP8.91□□□□□ -0.98
SAFB-208ENST00000590485 TIMELESSQ9UNS1 1208 aa8.91□□□□□ -0.98
SAFB-208ENST00000590485 FMNL1O95466 1100 aaPredicted RBP8.9□□□□□ -0.98
SAFB-208ENST00000590485 FBXO31Q5XUX0 539 aaPredicted RBP8.9□□□□□ -0.98
SAFB-208ENST00000590485 RETREG3Q86VR2 466 aa8.9□□□□□ -0.98
SAFB-208ENST00000590485 TSC1Q92574 1164 aa8.9□□□□□ -0.98
SAFB-208ENST00000590485 MTRQ99707 1265 aa8.9□□□□□ -0.98
SAFB-208ENST00000590485 MCM6Q14566 821 aa8.89□□□□□ -0.99
SAFB-208ENST00000590485 SCUBE3Q8IX30 993 aa8.89□□□□□ -0.99
SAFB-208ENST00000590485 SYMPKQ92797 1274 aaKnown RBP8.89□□□□□ -0.99
SAFB-208ENST00000590485 SALL2Q9Y467 1007 aaPredicted RBP8.89□□□□□ -0.99
SAFB-208ENST00000590485 RNF19BQ6ZMZ0 732 aa8.88□□□□□ -0.99
SAFB-208ENST00000590485 PRR7Q8TB68 274 aa8.88□□□□□ -0.99
SAFB-208ENST00000590485 CFAP99D6REC4 459 aa8.87□□□□□ -0.99
SAFB-208ENST00000590485 APBB1O00213 710 aa8.87□□□□□ -0.99
SAFB-208ENST00000590485 BRICD5Q6PL45 260 aa8.87□□□□□ -0.99
SAFB-208ENST00000590485 USB1Q9BQ65 265 aaKnown RBP8.87□□□□□ -0.99
SAFB-208ENST00000590485 IL21Q9HBE4 155 aa8.87□□□□□ -0.99
SAFB-208ENST00000590485 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.87□□□□□ -0.99
SAFB-208ENST00000590485 USP17L8P0C7I0 530 aa8.86□□□□□ -0.99
SAFB-208ENST00000590485 ZNF516Q92618 1163 aa8.86□□□□□ -0.99
SAFB-208ENST00000590485 UBTFP17480 764 aaKnown RBP8.85□□□□□ -0.99
SAFB-208ENST00000590485 LCE2AQ5TA79 106 aaPredicted RBP8.85□□□□□ -0.99
SAFB-208ENST00000590485 THAP11Q96EK4 314 aa8.85□□□□□ -0.99
SAFB-208ENST00000590485 POTECB2RU33 542 aa8.84□□□□□ -0.99
SAFB-208ENST00000590485 ZPR1O75312 459 aa8.84□□□□□ -0.99
SAFB-208ENST00000590485 TRIM67Q6ZTA4 783 aa8.84□□□□□ -0.99
SAFB-208ENST00000590485 SPSB2Q99619 263 aa8.84□□□□□ -0.99
SAFB-208ENST00000590485 TLL1O43897 1013 aa8.83□□□□□ -1
SAFB-208ENST00000590485 ADH1BP00325 375 aa8.83□□□□□ -1
SAFB-208ENST00000590485 DESI1Q6ICB0 168 aa8.83□□□□□ -1
SAFB-208ENST00000590485 SNRKQ9NRH2 765 aa8.83□□□□□ -1
SAFB-208ENST00000590485 SOCS7O14512 581 aa8.82□□□□□ -1
SAFB-208ENST00000590485 MSS51Q4VC12 460 aa8.82□□□□□ -1
SAFB-208ENST00000590485 PRM3Q9NNZ6 103 aa8.82□□□□□ -1
SAFB-208ENST00000590485 RAD21O60216 631 aa8.81□□□□□ -1
SAFB-208ENST00000590485 JUNDP17535 347 aa8.81□□□□□ -1
SAFB-208ENST00000590485 CTDSPL2Q05D32 466 aa8.81□□□□□ -1
SAFB-208ENST00000590485 MTMR14Q8NCE2 650 aa8.81□□□□□ -1
SAFB-208ENST00000590485 ABCC9O60706 1549 aa8.8□□□□□ -1
SAFB-208ENST00000590485 MYT1Q01538 1121 aa8.8□□□□□ -1
SAFB-208ENST00000590485 NKX2-3Q8TAU0 364 aa8.8□□□□□ -1
SAFB-208ENST00000590485 ZMYND15Q9H091 742 aa8.79□□□□□ -1
SAFB-208ENST00000590485 PTPRNQ16849 979 aa8.78□□□□□ -1
SAFB-208ENST00000590485 FAM160A2Q8N612 972 aaPredicted RBP8.78□□□□□ -1
SAFB-208ENST00000590485 LRRN4Q8WUT4 740 aa8.78□□□□□ -1
SAFB-208ENST00000590485 DXOO77932 396 aaKnown RBP8.77□□□□□ -1.01
SAFB-208ENST00000590485 LYPD8Q6UX82 237 aa8.77□□□□□ -1.01
SAFB-208ENST00000590485 SLC6A16Q9GZN6 736 aa8.77□□□□□ -1.01
SAFB-208ENST00000590485 PRDM9Q9NQV7 894 aa8.77□□□□□ -1.01
SAFB-208ENST00000590485 NDUFB9Q9Y6M9 179 aa8.77□□□□□ -1.01
SAFB-208ENST00000590485 PER1O15534 1290 aaPredicted RBP8.76□□□□□ -1.01
SAFB-208ENST00000590485 TREML4Q6UXN2 200 aa8.76□□□□□ -1.01
SAFB-208ENST00000590485 PNMA1Q8ND90 353 aa8.76□□□□□ -1.01
SAFB-208ENST00000590485 EMID1Q96A84 441 aaPredicted RBP8.76□□□□□ -1.01
SAFB-208ENST00000590485 HMX1Q9NP08 348 aaPredicted RBP8.76□□□□□ -1.01
SAFB-208ENST00000590485 A6NJR5 290 aa8.75□□□□□ -1.01
SAFB-208ENST00000590485 MMP16P51512 607 aa8.75□□□□□ -1.01
SAFB-208ENST00000590485 WWC1Q8IX03 1113 aa8.75□□□□□ -1.01
SAFB-208ENST00000590485 CLUAP1Q96AJ1 413 aa8.75□□□□□ -1.01
SAFB-208ENST00000590485 COG6Q9Y2V7 657 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms