RNA–Protein interactions for RNA: ENST00000588961.1

KDM4B-207, Transcript of lysine demethylase 4B, humanhuman

TSL 4

Gene KDM4B, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-207ENST00000588961 XRN1Q8IZH2 1706 aaKnown RBP12.2□□□□□ -0.46
KDM4B-207ENST00000588961 FBXO41Q8TF61 875 aa12.2□□□□□ -0.46
KDM4B-207ENST00000588961 ASXL1Q8IXJ9 1541 aa12.2□□□□□ -0.46
KDM4B-207ENST00000588961 DSG3P32926 999 aa12.19□□□□□ -0.46
KDM4B-207ENST00000588961 ILDR1Q86SU0 546 aaPredicted RBP12.19□□□□□ -0.46
KDM4B-207ENST00000588961 ROBO2Q9HCK4 1378 aa12.18□□□□□ -0.46
KDM4B-207ENST00000588961 PIP4K2BP78356 416 aa12.18□□□□□ -0.46
KDM4B-207ENST00000588961 NBPF1Q3BBV0 1214 aa12.18□□□□□ -0.46
KDM4B-207ENST00000588961 WAPLQ7Z5K2 1190 aa12.18□□□□□ -0.46
KDM4B-207ENST00000588961 PRAG1Q86YV5 1406 aa12.18□□□□□ -0.46
KDM4B-207ENST00000588961 YTHDC2Q9H6S0 1430 aaKnown RBP12.18□□□□□ -0.46
KDM4B-207ENST00000588961 LRPPRCP42704 1394 aaKnown RBP12.18□□□□□ -0.46
KDM4B-207ENST00000588961 TOM1O60784 492 aa12.17□□□□□ -0.46
KDM4B-207ENST00000588961 TRAK1Q9UPV9 953 aa12.17□□□□□ -0.46
KDM4B-207ENST00000588961 LAMC1P11047 1609 aa12.16□□□□□ -0.46
KDM4B-207ENST00000588961 NBPF8Q3BBV2 869 aa12.16□□□□□ -0.46
KDM4B-207ENST00000588961 MSH6P52701 1360 aa12.16□□□□□ -0.46
KDM4B-207ENST00000588961 ABCC11Q96J66 1382 aa12.16□□□□□ -0.46
KDM4B-207ENST00000588961 ADGRB1O14514 1584 aa12.15□□□□□ -0.46
KDM4B-207ENST00000588961 CCER2I3L3R5 266 aa12.15□□□□□ -0.46
KDM4B-207ENST00000588961 C19orf44Q9H6X5 657 aa12.15□□□□□ -0.46
KDM4B-207ENST00000588961 PLEKHH1Q9ULM0 1364 aa12.15□□□□□ -0.46
KDM4B-207ENST00000588961 PTCH1Q13635 1447 aa12.14□□□□□ -0.47
KDM4B-207ENST00000588961 NCOA3Q9Y6Q9 1424 aa12.14□□□□□ -0.47
KDM4B-207ENST00000588961 EIF4G2P78344 907 aaKnown RBP eCLIP12.14□□□□□ -0.47
KDM4B-207ENST00000588961 SAFB2Q14151 953 aaKnown RBP eCLIP12.14□□□□□ -0.47
KDM4B-207ENST00000588961 ABCB7O75027 752 aa12.13□□□□□ -0.47
KDM4B-207ENST00000588961 ATF3P18847 181 aa12.13□□□□□ -0.47
KDM4B-207ENST00000588961 PRAM1Q96QH2 718 aa12.13□□□□□ -0.47
KDM4B-207ENST00000588961 TECPR2O15040 1411 aa12.12□□□□□ -0.47
KDM4B-207ENST00000588961 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.12□□□□□ -0.47
KDM4B-207ENST00000588961 POGKQ9P215 609 aa12.12□□□□□ -0.47
KDM4B-207ENST00000588961 KNDC1Q76NI1 1749 aa12.11□□□□□ -0.47
KDM4B-207ENST00000588961 KIAA1210Q9ULL0 1709 aa12.11□□□□□ -0.47
KDM4B-207ENST00000588961 CADPS2Q86UW7 1296 aa12.11□□□□□ -0.47
KDM4B-207ENST00000588961 SIRT1Q96EB6 747 aa12.11□□□□□ -0.47
KDM4B-207ENST00000588961 SLAIN2Q9P270 581 aa12.11□□□□□ -0.47
KDM4B-207ENST00000588961 NALCNQ8IZF0 1738 aa12.11□□□□□ -0.47
KDM4B-207ENST00000588961 ADGRL3Q9HAR2 1447 aa12.11□□□□□ -0.47
KDM4B-207ENST00000588961 TRPM1Q7Z4N2 1603 aa12.1□□□□□ -0.47
KDM4B-207ENST00000588961 FAM135BQ49AJ0 1406 aa12.1□□□□□ -0.47
KDM4B-207ENST00000588961 ROCK2O75116 1388 aaKnown RBP12.09□□□□□ -0.47
KDM4B-207ENST00000588961 DLC1Q96QB1 1528 aa12.08□□□□□ -0.48
KDM4B-207ENST00000588961 NUTM2FA1L443 756 aa12.08□□□□□ -0.48
KDM4B-207ENST00000588961 HIRIP3Q9BW71 556 aaPredicted RBP12.08□□□□□ -0.48
KDM4B-207ENST00000588961 MINK1Q8N4C8 1332 aaPredicted RBP12.08□□□□□ -0.48
KDM4B-207ENST00000588961 ANP32CO43423 234 aa12.07□□□□□ -0.48
KDM4B-207ENST00000588961 DCCP43146 1447 aa12.06□□□□□ -0.48
KDM4B-207ENST00000588961 MST1RQ04912 1400 aa12.06□□□□□ -0.48
KDM4B-207ENST00000588961 HSPA1LP34931 641 aa12.06□□□□□ -0.48
KDM4B-207ENST00000588961 DDX10Q13206 875 aaKnown RBP12.06□□□□□ -0.48
KDM4B-207ENST00000588961 CARD11Q9BXL7 1154 aa12.06□□□□□ -0.48
KDM4B-207ENST00000588961 ARHGEF28Q8N1W1 1705 aaKnown RBP12.06□□□□□ -0.48
KDM4B-207ENST00000588961 ROBO1Q9Y6N7 1651 aa12.05□□□□□ -0.48
KDM4B-207ENST00000588961 RALGAPBQ86X10 1494 aa12.04□□□□□ -0.48
KDM4B-207ENST00000588961 POLA2Q14181 598 aa12.04□□□□□ -0.48
KDM4B-207ENST00000588961 BRINP3Q76B58 766 aa12.04□□□□□ -0.48
KDM4B-207ENST00000588961 ORAI2Q96SN7 254 aa12.04□□□□□ -0.48
KDM4B-207ENST00000588961 C1orf167Q5SNV9 1468 aa12.03□□□□□ -0.48
KDM4B-207ENST00000588961 CENPJQ9HC77 1338 aaPredicted RBP12.03□□□□□ -0.48
KDM4B-207ENST00000588961 GPRASP1Q5JY77 1395 aa12.03□□□□□ -0.48
KDM4B-207ENST00000588961 CDC42BPGQ6DT37 1551 aa12.02□□□□□ -0.49
KDM4B-207ENST00000588961 WASLO00401 505 aaPredicted RBP12.02□□□□□ -0.49
KDM4B-207ENST00000588961 HSPA5P11021 654 aaKnown RBP12.02□□□□□ -0.49
KDM4B-207ENST00000588961 ESCO1Q5FWF5 840 aa12.02□□□□□ -0.49
KDM4B-207ENST00000588961 DDX17Q92841 729 aaKnown RBP12.02□□□□□ -0.49
KDM4B-207ENST00000588961 FMN2Q9NZ56 1722 aa12□□□□□ -0.49
KDM4B-207ENST00000588961 CDK19Q9BWU1 502 aa12□□□□□ -0.49
KDM4B-207ENST00000588961 ADGRB2O60241 1585 aa11.99□□□□□ -0.49
KDM4B-207ENST00000588961 QRICH2Q9H0J4 1663 aa11.99□□□□□ -0.49
KDM4B-207ENST00000588961 EIF3AQ14152 1382 aaKnown RBP11.98□□□□□ -0.49
KDM4B-207ENST00000588961 PRR36Q9H6K5 1346 aa11.98□□□□□ -0.49
KDM4B-207ENST00000588961 RGPD8O14715 1765 aaPredicted RBP11.97□□□□□ -0.49
KDM4B-207ENST00000588961 PHLPP1O60346 1717 aa11.97□□□□□ -0.49
KDM4B-207ENST00000588961 WASHC2AQ641Q2 1341 aa11.97□□□□□ -0.49
KDM4B-207ENST00000588961 ST20-MTHFSA0A0A6YYL1 179 aa11.97□□□□□ -0.49
KDM4B-207ENST00000588961 FOXO3O43524 673 aa11.97□□□□□ -0.49
KDM4B-207ENST00000588961 SRPK2P78362 688 aaKnown RBP11.97□□□□□ -0.49
KDM4B-207ENST00000588961 PMFBP1Q8TBY8 1022 aa11.97□□□□□ -0.49
KDM4B-207ENST00000588961 CABP2Q9NPB3 220 aa11.97□□□□□ -0.49
KDM4B-207ENST00000588961 USP32Q8NFA0 1604 aa11.97□□□□□ -0.49
KDM4B-207ENST00000588961 CCDC7Q96M83 1385 aa11.96□□□□□ -0.49
KDM4B-207ENST00000588961 SLC24A1O60721 1099 aa11.96□□□□□ -0.49
KDM4B-207ENST00000588961 XPCQ01831 940 aaPredicted RBP11.96□□□□□ -0.49
KDM4B-207ENST00000588961 NUDT16Q96DE0 195 aaKnown RBP11.96□□□□□ -0.49
KDM4B-207ENST00000588961 PHF8Q9UPP1 1060 aa11.96□□□□□ -0.49
KDM4B-207ENST00000588961 TULP4Q9NRJ4 1543 aa11.95□□□□□ -0.5
KDM4B-207ENST00000588961 ANKARQ7Z5J8 1434 aa11.94□□□□□ -0.5
KDM4B-207ENST00000588961 USP47Q96K76 1375 aa11.94□□□□□ -0.5
KDM4B-207ENST00000588961 AHDC1Q5TGY3 1603 aaPredicted RBP11.94□□□□□ -0.5
KDM4B-207ENST00000588961 EVC2Q86UK5 1308 aa11.94□□□□□ -0.5
KDM4B-207ENST00000588961 GTF3C3Q9Y5Q9 886 aa11.94□□□□□ -0.5
KDM4B-207ENST00000588961 NHSL1Q5SYE7 1610 aa11.93□□□□□ -0.5
KDM4B-207ENST00000588961 KRT28Q7Z3Y7 464 aa11.93□□□□□ -0.5
KDM4B-207ENST00000588961 COL16A1Q07092 1604 aaPredicted RBP11.93□□□□□ -0.5
KDM4B-207ENST00000588961 KTN1Q86UP2 1357 aaKnown RBP11.92□□□□□ -0.5
KDM4B-207ENST00000588961 SOS2Q07890 1332 aaPredicted RBP11.92□□□□□ -0.5
KDM4B-207ENST00000588961 NPHP3Q7Z494 1330 aa11.92□□□□□ -0.5
KDM4B-207ENST00000588961 ATP7BP35670 1465 aa11.92□□□□□ -0.5
KDM4B-207ENST00000588961 PSME1Q06323 249 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms