RNA–Protein interactions for RNA: ENST00000588228.5

NFIX-210, Transcript of nuclear factor I X, humanhuman

TSL 2 BASIC

Gene NFIX, Length 1,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-210ENST00000588228 BCANQ96GW7 911 aa22.41■■□□□ 1.18
NFIX-210ENST00000588228 TECPR2O15040 1411 aa22.41■■□□□ 1.18
NFIX-210ENST00000588228 HNRNPUQ00839 825 aaKnown RBP eCLIP22.4■■□□□ 1.18
NFIX-210ENST00000588228 SIRT1Q96EB6 747 aa22.4■■□□□ 1.18
NFIX-210ENST00000588228 NINLQ9Y2I6 1382 aa22.4■■□□□ 1.18
NFIX-210ENST00000588228 MINK1Q8N4C8 1332 aaPredicted RBP22.39■■□□□ 1.18
NFIX-210ENST00000588228 PNISRQ8TF01 805 aaKnown RBP22.39■■□□□ 1.17
NFIX-210ENST00000588228 CARD14Q9BXL6 1004 aa22.39■■□□□ 1.17
NFIX-210ENST00000588228 SLC12A5Q9H2X9 1139 aa22.39■■□□□ 1.17
NFIX-210ENST00000588228 CEP170BQ9Y4F5 1589 aaPredicted RBP22.39■■□□□ 1.17
NFIX-210ENST00000588228 SCAF1Q9H7N4 1312 aaKnown RBP22.38■■□□□ 1.17
NFIX-210ENST00000588228 ATAD2Q6PL18 1390 aa22.38■■□□□ 1.17
NFIX-210ENST00000588228 KNDC1Q76NI1 1749 aa22.38■■□□□ 1.17
NFIX-210ENST00000588228 FAM135BQ49AJ0 1406 aa22.38■■□□□ 1.17
NFIX-210ENST00000588228 CABP2Q9NPB3 220 aa22.38■■□□□ 1.17
NFIX-210ENST00000588228 MED14O60244 1454 aa22.37■■□□□ 1.17
NFIX-210ENST00000588228 SRPK2P78362 688 aaKnown RBP22.36■■□□□ 1.17
NFIX-210ENST00000588228 CPS1P31327 1500 aa22.36■■□□□ 1.17
NFIX-210ENST00000588228 ANKRD36BQ8N2N9 1353 aa22.35■■□□□ 1.17
NFIX-210ENST00000588228 PLEKHH1Q9ULM0 1364 aa22.35■■□□□ 1.17
NFIX-210ENST00000588228 WAPLQ7Z5K2 1190 aa22.35■■□□□ 1.17
NFIX-210ENST00000588228 GTF3C3Q9Y5Q9 886 aa22.34■■□□□ 1.17
NFIX-210ENST00000588228 NSD3Q9BZ95 1437 aa22.33■■□□□ 1.17
NFIX-210ENST00000588228 CDK19Q9BWU1 502 aa22.32■■□□□ 1.16
NFIX-210ENST00000588228 TBX22Q9Y458 520 aa22.32■■□□□ 1.16
NFIX-210ENST00000588228 DIP2AQ14689 1571 aa22.31■■□□□ 1.16
NFIX-210ENST00000588228 ZNF142P52746 1687 aaPredicted RBP22.31■■□□□ 1.16
NFIX-210ENST00000588228 PPP2R1AP30153 589 aa22.3■■□□□ 1.16
NFIX-210ENST00000588228 USP32Q8NFA0 1604 aa22.3■■□□□ 1.16
NFIX-210ENST00000588228 ZBED9Q6R2W3 1325 aa22.28■■□□□ 1.16
NFIX-210ENST00000588228 SLC26A8Q96RN1 970 aa22.27■■□□□ 1.16
NFIX-210ENST00000588228 ROBO2Q9HCK4 1378 aa22.27■■□□□ 1.16
NFIX-210ENST00000588228 CGNL1Q0VF96 1302 aa22.27■■□□□ 1.16
NFIX-210ENST00000588228 WASLO00401 505 aaPredicted RBP22.26■■□□□ 1.15
NFIX-210ENST00000588228 TERF2IPQ9NYB0 399 aa22.26■■□□□ 1.15
NFIX-210ENST00000588228 PTPRUQ92729 1446 aa22.25■■□□□ 1.15
NFIX-210ENST00000588228 A0A1W2PP64 1363 aa22.25■■□□□ 1.15
NFIX-210ENST00000588228 NSD2O96028 1365 aa22.25■■□□□ 1.15
NFIX-210ENST00000588228 INSRP06213 1382 aa22.25■■□□□ 1.15
NFIX-210ENST00000588228 ANKLE2Q86XL3 938 aa22.23■■□□□ 1.15
NFIX-210ENST00000588228 CD163L1Q9NR16 1453 aa22.23■■□□□ 1.15
NFIX-210ENST00000588228 PTCH1Q13635 1447 aa22.22■■□□□ 1.15
NFIX-210ENST00000588228 PIK3R4Q99570 1358 aa22.21■■□□□ 1.15
NFIX-210ENST00000588228 HDGFL2Q7Z4V5 671 aaPredicted RBP22.21■■□□□ 1.15
NFIX-210ENST00000588228 AMOTL2Q9Y2J4 779 aa22.21■■□□□ 1.15
NFIX-210ENST00000588228 SETD1BQ9UPS6 1966 aaKnown RBP22.21■■□□□ 1.15
NFIX-210ENST00000588228 ADGRB2O60241 1585 aa22.2■■□□□ 1.14
NFIX-210ENST00000588228 ATP7BP35670 1465 aa22.2■■□□□ 1.14
NFIX-210ENST00000588228 MORC1Q86VD1 984 aa22.2■■□□□ 1.14
NFIX-210ENST00000588228 CABP1Q9NZU7 370 aa22.2■■□□□ 1.14
NFIX-210ENST00000588228 XRN1Q8IZH2 1706 aaKnown RBP22.15■■□□□ 1.14
NFIX-210ENST00000588228 BLMP54132 1417 aaPredicted RBP22.15■■□□□ 1.14
NFIX-210ENST00000588228 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.14■■□□□ 1.14
NFIX-210ENST00000588228 NUDT16Q96DE0 195 aaKnown RBP22.14■■□□□ 1.14
NFIX-210ENST00000588228 CCDC61Q9Y6R9 512 aa22.14■■□□□ 1.14
NFIX-210ENST00000588228 PPIP5K1Q6PFW1 1433 aa22.14■■□□□ 1.14
NFIX-210ENST00000588228 POLR3AO14802 1390 aaPredicted RBP22.13■■□□□ 1.13
NFIX-210ENST00000588228 WDR43Q15061 677 aaKnown RBP eCLIP22.13■■□□□ 1.13
NFIX-210ENST00000588228 CPSF1Q10570 1443 aaKnown RBP22.12■■□□□ 1.13
NFIX-210ENST00000588228 ADAMTS8Q9UP79 889 aa22.1■■□□□ 1.13
NFIX-210ENST00000588228 PRR36Q9H6K5 1346 aa22.09■■□□□ 1.13
NFIX-210ENST00000588228 CDC42BPGQ6DT37 1551 aa22.09■■□□□ 1.13
NFIX-210ENST00000588228 FYB1O15117 783 aa22.09■■□□□ 1.13
NFIX-210ENST00000588228 NPHP4O75161 1426 aaPredicted RBP22.09■■□□□ 1.13
NFIX-210ENST00000588228 KCNA6P17658 529 aa22.08■■□□□ 1.13
NFIX-210ENST00000588228 EDC4Q6P2E9 1401 aaKnown RBP22.07■■□□□ 1.12
NFIX-210ENST00000588228 TNNT2P45379 298 aaPredicted RBP22.07■■□□□ 1.12
NFIX-210ENST00000588228 GGNBP2Q9H3C7 697 aa22.07■■□□□ 1.12
NFIX-210ENST00000588228 ANKRD26Q9UPS8 1709 aa22.05■■□□□ 1.12
NFIX-210ENST00000588228 ZNF692Q9BU19 519 aaPredicted RBP22.04■■□□□ 1.12
NFIX-210ENST00000588228 SMG6Q86US8 1419 aaKnown RBP22.04■■□□□ 1.12
NFIX-210ENST00000588228 MTHFSP49914 203 aa22.04■■□□□ 1.12
NFIX-210ENST00000588228 NCKAP5LQ9HCH0 1330 aa22.03■■□□□ 1.12
NFIX-210ENST00000588228 TOPAZ1Q8N9V7 1692 aa22.03■■□□□ 1.12
NFIX-210ENST00000588228 PLEKHG3A1L390 1219 aa22.03■■□□□ 1.12
NFIX-210ENST00000588228 CFAP53Q96M91 514 aa22.03■■□□□ 1.12
NFIX-210ENST00000588228 KIF20BQ96Q89 1820 aa22.02■■□□□ 1.11
NFIX-210ENST00000588228 CHD2O14647 1828 aaKnown RBP22.01■■□□□ 1.11
NFIX-210ENST00000588228 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.01■■□□□ 1.11
NFIX-210ENST00000588228 MON2Q7Z3U7 1717 aa22■■□□□ 1.11
NFIX-210ENST00000588228 PDE3BQ13370 1112 aa22■■□□□ 1.11
NFIX-210ENST00000588228 NUDCQ9Y266 331 aa22■■□□□ 1.11
NFIX-210ENST00000588228 AKAP12Q02952 1782 aa21.99■■□□□ 1.11
NFIX-210ENST00000588228 ANKARQ7Z5J8 1434 aa21.98■■□□□ 1.11
NFIX-210ENST00000588228 SENP3-EIF4A1A0A087X0R7 540 aa21.98■■□□□ 1.11
NFIX-210ENST00000588228 ITSN1Q15811 1721 aa21.98■■□□□ 1.11
NFIX-210ENST00000588228 NEFLP07196 543 aa21.97■■□□□ 1.11
NFIX-210ENST00000588228 ACEP12821 1306 aa21.97■■□□□ 1.11
NFIX-210ENST00000588228 NKTRP30414 1462 aaKnown RBP21.96■■□□□ 1.11
NFIX-210ENST00000588228 NUTM2FA1L443 756 aa21.96■■□□□ 1.11
NFIX-210ENST00000588228 SHPRHQ149N8 1683 aa21.96■■□□□ 1.11
NFIX-210ENST00000588228 SUPT16HQ9Y5B9 1047 aaKnown RBP21.95■■□□□ 1.1
NFIX-210ENST00000588228 SALL2Q9Y467 1007 aaPredicted RBP21.95■■□□□ 1.1
NFIX-210ENST00000588228 NME9Q86XW9 330 aa21.94■■□□□ 1.1
NFIX-210ENST00000588228 USP6P35125 1406 aa21.94■■□□□ 1.1
NFIX-210ENST00000588228 NWD1Q149M9 1564 aa21.93■■□□□ 1.1
NFIX-210ENST00000588228 NRKQ7Z2Y5 1582 aa21.92■■□□□ 1.1
NFIX-210ENST00000588228 TTC21BQ7Z4L5 1316 aa21.92■■□□□ 1.1
NFIX-210ENST00000588228 FMN2Q9NZ56 1722 aa21.91■■□□□ 1.1
NFIX-210ENST00000588228 ADGRL3Q9HAR2 1447 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms