RNA–Protein interactions for RNA: ENST00000585735.1

GHDC-205, Transcript of GH3 domain containing, humanhuman

TSL 2

Gene GHDC, Length 940 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-205ENST00000585735 RALGAPBQ86X10 1494 aa29.03■■■□□ 2.24
GHDC-205ENST00000585735 PRAG1Q86YV5 1406 aa29.03■■■□□ 2.24
GHDC-205ENST00000585735 CHGAP10645 457 aaKnown RBP29.01■■■□□ 2.23
GHDC-205ENST00000585735 MST1RQ04912 1400 aa29.01■■■□□ 2.23
GHDC-205ENST00000585735 EIF4G2P78344 907 aaKnown RBP eCLIP28.99■■■□□ 2.23
GHDC-205ENST00000585735 PNPLA6Q8IY17 1366 aa28.99■■■□□ 2.23
GHDC-205ENST00000585735 XRN1Q8IZH2 1706 aaKnown RBP28.97■■■□□ 2.23
GHDC-205ENST00000585735 DIEXFQ68CQ4 756 aaKnown RBP28.97■■■□□ 2.23
GHDC-205ENST00000585735 ATAD2Q6PL18 1390 aa28.97■■■□□ 2.23
GHDC-205ENST00000585735 HSPA5P11021 654 aaKnown RBP28.96■■■□□ 2.23
GHDC-205ENST00000585735 DDX17Q92841 729 aaKnown RBP28.96■■■□□ 2.23
GHDC-205ENST00000585735 NGLY1Q96IV0 654 aa28.95■■■□□ 2.22
GHDC-205ENST00000585735 SETBP1Q9Y6X0 1596 aa28.94■■■□□ 2.22
GHDC-205ENST00000585735 ZRANB1Q9UGI0 708 aa28.94■■■□□ 2.22
GHDC-205ENST00000585735 NRXN3Q9Y4C0 1643 aa28.92■■■□□ 2.22
GHDC-205ENST00000585735 HIRIP3Q9BW71 556 aaPredicted RBP28.92■■■□□ 2.22
GHDC-205ENST00000585735 TRPM1Q7Z4N2 1603 aa28.91■■■□□ 2.22
GHDC-205ENST00000585735 RPGRIP1LQ68CZ1 1315 aa28.91■■■□□ 2.22
GHDC-205ENST00000585735 MYOM2P54296 1465 aa28.9■■■□□ 2.22
GHDC-205ENST00000585735 ADAMTS2O95450 1211 aa28.89■■■□□ 2.22
GHDC-205ENST00000585735 ROCK2O75116 1388 aaKnown RBP28.88■■■□□ 2.21
GHDC-205ENST00000585735 CARD11Q9BXL7 1154 aa28.88■■■□□ 2.21
GHDC-205ENST00000585735 IFT172Q9UG01 1749 aa28.87■■■□□ 2.21
GHDC-205ENST00000585735 GPRASP1Q5JY77 1395 aa28.86■■■□□ 2.21
GHDC-205ENST00000585735 NALCNQ8IZF0 1738 aa28.86■■■□□ 2.21
GHDC-205ENST00000585735 USP21Q9UK80 565 aa28.85■■■□□ 2.21
GHDC-205ENST00000585735 EP400Q96L91 3159 aa28.85■■■□□ 2.21
GHDC-205ENST00000585735 USP47Q96K76 1375 aa28.85■■■□□ 2.21
GHDC-205ENST00000585735 LAMC1P11047 1609 aa28.84■■■□□ 2.21
GHDC-205ENST00000585735 TRPC5Q9UL62 973 aaPredicted RBP28.83■■■□□ 2.21
GHDC-205ENST00000585735 ADGRL3Q9HAR2 1447 aa28.82■■■□□ 2.2
GHDC-205ENST00000585735 NBPF1Q3BBV0 1214 aa28.81■■■□□ 2.2
GHDC-205ENST00000585735 PPLO60437 1756 aa28.8■■■□□ 2.2
GHDC-205ENST00000585735 NRXN1Q9ULB1 1477 aa28.8■■■□□ 2.2
GHDC-205ENST00000585735 FNBP4Q8N3X1 1017 aaPredicted RBP28.8■■■□□ 2.2
GHDC-205ENST00000585735 ADGRF5Q8IZF2 1346 aa28.79■■■□□ 2.2
GHDC-205ENST00000585735 ATRNO75882 1429 aa28.78■■■□□ 2.2
GHDC-205ENST00000585735 METP08581 1390 aa28.78■■■□□ 2.2
GHDC-205ENST00000585735 CCDC125Q86Z20 511 aa28.78■■■□□ 2.2
GHDC-205ENST00000585735 KIAA1210Q9ULL0 1709 aa28.77■■■□□ 2.2
GHDC-205ENST00000585735 C1orf167Q5SNV9 1468 aa28.76■■■□□ 2.19
GHDC-205ENST00000585735 NEXMIFQ5QGS0 1516 aa28.75■■■□□ 2.19
GHDC-205ENST00000585735 PTCH1Q13635 1447 aa28.75■■■□□ 2.19
GHDC-205ENST00000585735 SOS2Q07890 1332 aaPredicted RBP28.74■■■□□ 2.19
GHDC-205ENST00000585735 VGFO15240 615 aaPredicted RBP28.73■■■□□ 2.19
GHDC-205ENST00000585735 MARF1Q9Y4F3 1742 aaKnown RBP28.73■■■□□ 2.19
GHDC-205ENST00000585735 COL22A1Q8NFW1 1626 aaPredicted RBP28.72■■■□□ 2.19
GHDC-205ENST00000585735 PIK3C2GO75747 1445 aa28.69■■■□□ 2.18
GHDC-205ENST00000585735 ORAI2Q96SN7 254 aa28.69■■■□□ 2.18
GHDC-205ENST00000585735 CFAP70Q5T0N1 1121 aa28.68■■■□□ 2.18
GHDC-205ENST00000585735 DDX10Q13206 875 aaKnown RBP28.67■■■□□ 2.18
GHDC-205ENST00000585735 WASHC2AQ641Q2 1341 aa28.67■■■□□ 2.18
GHDC-205ENST00000585735 BCL9LQ86UU0 1499 aa28.66■■■□□ 2.18
GHDC-205ENST00000585735 ST20-MTHFSA0A0A6YYL1 179 aa28.66■■■□□ 2.18
GHDC-205ENST00000585735 CCDC7Q96M83 1385 aa28.65■■■□□ 2.18
GHDC-205ENST00000585735 C14orf93Q9H972 538 aaKnown RBP28.65■■■□□ 2.18
GHDC-205ENST00000585735 C11orf95C9JLR9 678 aaPredicted RBP28.63■■■□□ 2.17
GHDC-205ENST00000585735 BRWD3Q6RI45 1802 aa28.62■■■□□ 2.17
GHDC-205ENST00000585735 GJD4Q96KN9 370 aaPredicted RBP28.61■■■□□ 2.17
GHDC-205ENST00000585735 LRP5O75197 1615 aa28.59■■■□□ 2.17
GHDC-205ENST00000585735 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.59■■■□□ 2.17
GHDC-205ENST00000585735 KIF7Q2M1P5 1343 aa28.59■■■□□ 2.17
GHDC-205ENST00000585735 BLMP54132 1417 aaPredicted RBP28.58■■■□□ 2.17
GHDC-205ENST00000585735 EIF3AQ14152 1382 aaKnown RBP28.56■■■□□ 2.16
GHDC-205ENST00000585735 DEFB132Q7Z7B7 95 aa28.54■■■□□ 2.16
GHDC-205ENST00000585735 GLI3P10071 1580 aa28.54■■■□□ 2.16
GHDC-205ENST00000585735 ROBO2Q9HCK4 1378 aa28.53■■■□□ 2.16
GHDC-205ENST00000585735 ADGRB1O14514 1584 aa28.53■■■□□ 2.16
GHDC-205ENST00000585735 MIER1Q8N108 512 aa28.52■■■□□ 2.16
GHDC-205ENST00000585735 TESK2Q96S53 571 aa28.51■■■□□ 2.15
GHDC-205ENST00000585735 PXDNQ92626 1479 aa28.5■■■□□ 2.15
GHDC-205ENST00000585735 NPHP3Q7Z494 1330 aa28.47■■■□□ 2.15
GHDC-205ENST00000585735 TMEM132EQ6IEE7 984 aa28.46■■■□□ 2.15
GHDC-205ENST00000585735 TMF1P82094 1093 aa28.45■■■□□ 2.14
GHDC-205ENST00000585735 UNC5CLQ8IV45 518 aa28.45■■■□□ 2.14
GHDC-205ENST00000585735 SLIT2O94813 1529 aa28.44■■■□□ 2.14
GHDC-205ENST00000585735 ESCO1Q5FWF5 840 aa28.44■■■□□ 2.14
GHDC-205ENST00000585735 POLR3GLQ9BT43 218 aa28.44■■■□□ 2.14
GHDC-205ENST00000585735 SLC24A1O60721 1099 aa28.42■■■□□ 2.14
GHDC-205ENST00000585735 XPCQ01831 940 aaPredicted RBP28.42■■■□□ 2.14
GHDC-205ENST00000585735 FOXO3O43524 673 aa28.41■■■□□ 2.14
GHDC-205ENST00000585735 SF3B2Q13435 895 aaKnown RBP28.41■■■□□ 2.14
GHDC-205ENST00000585735 TRAK1Q9UPV9 953 aa28.4■■■□□ 2.14
GHDC-205ENST00000585735 CDC42BPGQ6DT37 1551 aa28.39■■■□□ 2.14
GHDC-205ENST00000585735 CENPJQ9HC77 1338 aaPredicted RBP28.38■■■□□ 2.13
GHDC-205ENST00000585735 SEPT12Q8IYM1 358 aa28.37■■■□□ 2.13
GHDC-205ENST00000585735 CDCA8Q53HL2 280 aa28.36■■■□□ 2.13
GHDC-205ENST00000585735 PSDA5PKW4 1024 aaPredicted RBP28.35■■■□□ 2.13
GHDC-205ENST00000585735 ANP32CO43423 234 aa28.35■■■□□ 2.13
GHDC-205ENST00000585735 SBNO2Q9Y2G9 1366 aa28.35■■■□□ 2.13
GHDC-205ENST00000585735 USP32Q8NFA0 1604 aa28.34■■■□□ 2.13
GHDC-205ENST00000585735 YTHDC2Q9H6S0 1430 aaKnown RBP28.34■■■□□ 2.13
GHDC-205ENST00000585735 LRPPRCP42704 1394 aaKnown RBP28.32■■■□□ 2.12
GHDC-205ENST00000585735 ONECUT3O60422 494 aaPredicted RBP28.31■■■□□ 2.12
GHDC-205ENST00000585735 STK26Q9P289 416 aa28.31■■■□□ 2.12
GHDC-205ENST00000585735 ARHGEF28Q8N1W1 1705 aaKnown RBP28.31■■■□□ 2.12
GHDC-205ENST00000585735 NWD2Q9ULI1 1742 aa28.3■■■□□ 2.12
GHDC-205ENST00000585735 PLCH1Q4KWH8 1693 aa28.3■■■□□ 2.12
GHDC-205ENST00000585735 SPATA31A3Q5VYP0 1347 aa28.29■■■□□ 2.12
GHDC-205ENST00000585735 VPS72Q15906 364 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms