RNA–Protein interactions for RNA: ENST00000583902.1

CASC3-209, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-209ENST00000583902 ASXL1Q8IXJ9 1541 aa12.83□□□□□ -0.36
CASC3-209ENST00000583902 PTCH1Q13635 1447 aa12.82□□□□□ -0.36
CASC3-209ENST00000583902 CHD2O14647 1828 aaKnown RBP12.81□□□□□ -0.36
CASC3-209ENST00000583902 TESK2Q96S53 571 aa12.81□□□□□ -0.36
CASC3-209ENST00000583902 DSG3P32926 999 aa12.8□□□□□ -0.36
CASC3-209ENST00000583902 TMEM132EQ6IEE7 984 aa12.8□□□□□ -0.36
CASC3-209ENST00000583902 METP08581 1390 aa12.8□□□□□ -0.36
CASC3-209ENST00000583902 QRICH2Q9H0J4 1663 aa12.8□□□□□ -0.36
CASC3-209ENST00000583902 POGKQ9P215 609 aa12.79□□□□□ -0.36
CASC3-209ENST00000583902 TRAK1Q9UPV9 953 aa12.79□□□□□ -0.36
CASC3-209ENST00000583902 EVC2Q86UK5 1308 aa12.79□□□□□ -0.36
CASC3-209ENST00000583902 CCDC7Q96M83 1385 aa12.79□□□□□ -0.36
CASC3-209ENST00000583902 XRN1Q8IZH2 1706 aaKnown RBP12.79□□□□□ -0.36
CASC3-209ENST00000583902 NINLQ9Y2I6 1382 aa12.78□□□□□ -0.36
CASC3-209ENST00000583902 NCOA3Q9Y6Q9 1424 aa12.78□□□□□ -0.36
CASC3-209ENST00000583902 KCNA6P17658 529 aa12.77□□□□□ -0.37
CASC3-209ENST00000583902 NKTRP30414 1462 aaKnown RBP12.77□□□□□ -0.37
CASC3-209ENST00000583902 NWD1Q149M9 1564 aa12.77□□□□□ -0.37
CASC3-209ENST00000583902 SLC26A8Q96RN1 970 aa12.76□□□□□ -0.37
CASC3-209ENST00000583902 AMOTL2Q9Y2J4 779 aa12.76□□□□□ -0.37
CASC3-209ENST00000583902 ADGRB2O60241 1585 aa12.75□□□□□ -0.37
CASC3-209ENST00000583902 KIF7Q2M1P5 1343 aa12.75□□□□□ -0.37
CASC3-209ENST00000583902 WASHC2AQ641Q2 1341 aa12.75□□□□□ -0.37
CASC3-209ENST00000583902 STRCQ7RTU9 1775 aa12.75□□□□□ -0.37
CASC3-209ENST00000583902 PRAM1Q96QH2 718 aa12.75□□□□□ -0.37
CASC3-209ENST00000583902 NCKAP5LQ9HCH0 1330 aa12.75□□□□□ -0.37
CASC3-209ENST00000583902 STK26Q9P289 416 aa12.75□□□□□ -0.37
CASC3-209ENST00000583902 ATAD2Q6PL18 1390 aa12.74□□□□□ -0.37
CASC3-209ENST00000583902 PTPRUQ92729 1446 aa12.72□□□□□ -0.37
CASC3-209ENST00000583902 ROBO2Q9HCK4 1378 aa12.71□□□□□ -0.37
CASC3-209ENST00000583902 DIEXFQ68CQ4 756 aaKnown RBP12.71□□□□□ -0.37
CASC3-209ENST00000583902 HIRIP3Q9BW71 556 aaPredicted RBP12.71□□□□□ -0.37
CASC3-209ENST00000583902 DISP3Q9P2K9 1392 aa12.7□□□□□ -0.38
CASC3-209ENST00000583902 HSPA2P54652 639 aa12.7□□□□□ -0.38
CASC3-209ENST00000583902 C11orf95C9JLR9 678 aaPredicted RBP12.69□□□□□ -0.38
CASC3-209ENST00000583902 WASLO00401 505 aaPredicted RBP12.69□□□□□ -0.38
CASC3-209ENST00000583902 KTN1Q86UP2 1357 aaKnown RBP12.69□□□□□ -0.38
CASC3-209ENST00000583902 TULP4Q9NRJ4 1543 aa12.67□□□□□ -0.38
CASC3-209ENST00000583902 DDX10Q13206 875 aaKnown RBP12.67□□□□□ -0.38
CASC3-209ENST00000583902 WAPLQ7Z5K2 1190 aa12.67□□□□□ -0.38
CASC3-209ENST00000583902 DCCP43146 1447 aa12.67□□□□□ -0.38
CASC3-209ENST00000583902 ANKARQ7Z5J8 1434 aa12.67□□□□□ -0.38
CASC3-209ENST00000583902 CDC42BPGQ6DT37 1551 aa12.67□□□□□ -0.38
CASC3-209ENST00000583902 MINK1Q8N4C8 1332 aaPredicted RBP12.66□□□□□ -0.38
CASC3-209ENST00000583902 ITSN1Q15811 1721 aa12.66□□□□□ -0.38
CASC3-209ENST00000583902 ADGRL3Q9HAR2 1447 aa12.66□□□□□ -0.38
CASC3-209ENST00000583902 SRPK2P78362 688 aaKnown RBP12.66□□□□□ -0.38
CASC3-209ENST00000583902 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.65□□□□□ -0.38
CASC3-209ENST00000583902 CDK19Q9BWU1 502 aa12.65□□□□□ -0.38
CASC3-209ENST00000583902 TERF2IPQ9NYB0 399 aa12.65□□□□□ -0.38
CASC3-209ENST00000583902 CCDC61Q9Y6R9 512 aa12.65□□□□□ -0.38
CASC3-209ENST00000583902 NPC1L1Q9UHC9 1359 aa12.65□□□□□ -0.38
CASC3-209ENST00000583902 PLEKHH1Q9ULM0 1364 aa12.65□□□□□ -0.38
CASC3-209ENST00000583902 PROSER2Q86WR7 435 aaPredicted RBP12.64□□□□□ -0.39
CASC3-209ENST00000583902 C19orf44Q9H6X5 657 aa12.64□□□□□ -0.39
CASC3-209ENST00000583902 ATP7BP35670 1465 aa12.64□□□□□ -0.39
CASC3-209ENST00000583902 MYOM1P52179 1685 aa12.64□□□□□ -0.39
CASC3-209ENST00000583902 SAFB2Q14151 953 aaKnown RBP eCLIP12.63□□□□□ -0.39
CASC3-209ENST00000583902 ZNF692Q9BU19 519 aaPredicted RBP12.63□□□□□ -0.39
CASC3-209ENST00000583902 ANKRD36BQ8N2N9 1353 aa12.63□□□□□ -0.39
CASC3-209ENST00000583902 BRD4O60885 1362 aaPredicted RBP12.62□□□□□ -0.39
CASC3-209ENST00000583902 ANP32CO43423 234 aa12.62□□□□□ -0.39
CASC3-209ENST00000583902 FMN2Q9NZ56 1722 aa12.62□□□□□ -0.39
CASC3-209ENST00000583902 PLEKHG3A1L390 1219 aa12.61□□□□□ -0.39
CASC3-209ENST00000583902 HDGFL2Q7Z4V5 671 aaPredicted RBP12.61□□□□□ -0.39
CASC3-209ENST00000583902 POLR3GLQ9BT43 218 aa12.61□□□□□ -0.39
CASC3-209ENST00000583902 KNSTRNQ9Y448 316 aa12.61□□□□□ -0.39
CASC3-209ENST00000583902 USP32Q8NFA0 1604 aa12.61□□□□□ -0.39
CASC3-209ENST00000583902 NALCNQ8IZF0 1738 aa12.6□□□□□ -0.39
CASC3-209ENST00000583902 NSD2O96028 1365 aa12.6□□□□□ -0.39
CASC3-209ENST00000583902 CADPS2Q86UW7 1296 aa12.6□□□□□ -0.39
CASC3-209ENST00000583902 NUDT16Q96DE0 195 aaKnown RBP12.6□□□□□ -0.39
CASC3-209ENST00000583902 PANK3Q9H999 370 aa12.6□□□□□ -0.39
CASC3-209ENST00000583902 CABP2Q9NPB3 220 aa12.6□□□□□ -0.39
CASC3-209ENST00000583902 TOPAZ1Q8N9V7 1692 aa12.6□□□□□ -0.39
CASC3-209ENST00000583902 MSH6P52701 1360 aa12.59□□□□□ -0.39
CASC3-209ENST00000583902 STRCP1A6NGW2 1772 aa12.59□□□□□ -0.39
CASC3-209ENST00000583902 ZBTB22O15209 634 aa12.59□□□□□ -0.39
CASC3-209ENST00000583902 PER1O15534 1290 aaPredicted RBP12.59□□□□□ -0.39
CASC3-209ENST00000583902 ABCB7O75027 752 aa12.59□□□□□ -0.39
CASC3-209ENST00000583902 RALBP1Q15311 655 aa12.59□□□□□ -0.39
CASC3-209ENST00000583902 TMEM94Q12767 1356 aa12.58□□□□□ -0.4
CASC3-209ENST00000583902 C14orf37Q86TY3 774 aa12.58□□□□□ -0.4
CASC3-209ENST00000583902 TMC1Q8TDI8 760 aa12.58□□□□□ -0.4
CASC3-209ENST00000583902 PPIP5K1Q6PFW1 1433 aa12.57□□□□□ -0.4
CASC3-209ENST00000583902 ATF3P18847 181 aa12.57□□□□□ -0.4
CASC3-209ENST00000583902 CGNL1Q0VF96 1302 aa12.57□□□□□ -0.4
CASC3-209ENST00000583902 LRRC7Q96NW7 1537 aa12.57□□□□□ -0.4
CASC3-209ENST00000583902 AKAP12Q02952 1782 aa12.56□□□□□ -0.4
CASC3-209ENST00000583902 CPSF1Q10570 1443 aaKnown RBP12.56□□□□□ -0.4
CASC3-209ENST00000583902 ILDR1Q86SU0 546 aaPredicted RBP12.56□□□□□ -0.4
CASC3-209ENST00000583902 SLC12A5Q9H2X9 1139 aa12.56□□□□□ -0.4
CASC3-209ENST00000583902 KIF1AQ12756 1690 aa12.56□□□□□ -0.4
CASC3-209ENST00000583902 POLR3AO14802 1390 aaPredicted RBP12.56□□□□□ -0.4
CASC3-209ENST00000583902 CCER2I3L3R5 266 aa12.55□□□□□ -0.4
CASC3-209ENST00000583902 ATXN8OSP0DMR3 200 aa12.55□□□□□ -0.4
CASC3-209ENST00000583902 CABP1Q9NZU7 370 aa12.55□□□□□ -0.4
CASC3-209ENST00000583902 EDC4Q6P2E9 1401 aaKnown RBP12.54□□□□□ -0.4
CASC3-209ENST00000583902 MON2Q7Z3U7 1717 aa12.54□□□□□ -0.4
CASC3-209ENST00000583902 IQSEC2Q5JU85 1478 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms