RNA–Protein interactions for RNA: ENST00000582242.1

CDH8-207, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-207ENST00000582242 SOCS7O14512 581 aa14.57□□□□□ -0.08
CDH8-207ENST00000582242 HDGFP51858 240 aaKnown RBP14.56□□□□□ -0.08
CDH8-207ENST00000582242 FNBP4Q8N3X1 1017 aaPredicted RBP14.56□□□□□ -0.08
CDH8-207ENST00000582242 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.56□□□□□ -0.08
CDH8-207ENST00000582242 SLC4A3P48751 1232 aa14.55□□□□□ -0.08
CDH8-207ENST00000582242 LRCH3Q96II8 777 aa14.55□□□□□ -0.08
CDH8-207ENST00000582242 COG6Q9Y2V7 657 aa14.55□□□□□ -0.08
CDH8-207ENST00000582242 SLF2Q8IX21 1173 aa14.54□□□□□ -0.08
CDH8-207ENST00000582242 FDX1P10109 184 aa14.53□□□□□ -0.08
CDH8-207ENST00000582242 RTL5Q5HYW3 569 aaPredicted RBP14.53□□□□□ -0.08
CDH8-207ENST00000582242 TSR3Q9UJK0 312 aaKnown RBP14.53□□□□□ -0.08
CDH8-207ENST00000582242 MTMR14Q8NCE2 650 aa14.52□□□□□ -0.09
CDH8-207ENST00000582242 ZBTB3Q9H5J0 574 aa14.52□□□□□ -0.09
CDH8-207ENST00000582242 HPS5Q9UPZ3 1129 aa14.52□□□□□ -0.09
CDH8-207ENST00000582242 CABLES1Q8TDN4 633 aa14.51□□□□□ -0.09
CDH8-207ENST00000582242 NUTM2BA6NNL0 878 aaPredicted RBP14.5□□□□□ -0.09
CDH8-207ENST00000582242 NUTM2EB1AL46 878 aaPredicted RBP14.5□□□□□ -0.09
CDH8-207ENST00000582242 HRCP23327 699 aa14.5□□□□□ -0.09
CDH8-207ENST00000582242 NUTM2DQ5VT03 806 aaPredicted RBP14.5□□□□□ -0.09
CDH8-207ENST00000582242 SAMD7Q7Z3H4 446 aa14.5□□□□□ -0.09
CDH8-207ENST00000582242 NUTM2AQ8IVF1 878 aaPredicted RBP14.5□□□□□ -0.09
CDH8-207ENST00000582242 PCDHGC3Q9UN70 934 aa14.49□□□□□ -0.09
CDH8-207ENST00000582242 AP1G2O75843 785 aa14.48□□□□□ -0.09
CDH8-207ENST00000582242 ARID3AQ99856 593 aa14.48□□□□□ -0.09
CDH8-207ENST00000582242 CFHP08603 1231 aa14.46□□□□□ -0.09
CDH8-207ENST00000582242 USP17L8P0C7I0 530 aa14.46□□□□□ -0.09
CDH8-207ENST00000582242 GUCA2AQ02747 115 aa14.46□□□□□ -0.09
CDH8-207ENST00000582242 KCNC4Q03721 635 aa14.46□□□□□ -0.09
CDH8-207ENST00000582242 GRIPAP1Q4V328 841 aa14.46□□□□□ -0.09
CDH8-207ENST00000582242 HLA-CQ95604 372 aa14.46□□□□□ -0.09
CDH8-207ENST00000582242 FUT2Q10981 343 aa14.44□□□□□ -0.1
CDH8-207ENST00000582242 CCDC82Q8N4S0 544 aa14.44□□□□□ -0.1
CDH8-207ENST00000582242 MTMR2Q13614 643 aa14.43□□□□□ -0.1
CDH8-207ENST00000582242 ZNF777Q9ULD5 760 aaPredicted RBP14.43□□□□□ -0.1
CDH8-207ENST00000582242 PRM3Q9NNZ6 103 aa14.42□□□□□ -0.1
CDH8-207ENST00000582242 GDPD2Q9HCC8 539 aa14.41□□□□□ -0.1
CDH8-207ENST00000582242 ATP6V1AP38606 617 aa14.4□□□□□ -0.1
CDH8-207ENST00000582242 PPP4CP60510 307 aa14.4□□□□□ -0.1
CDH8-207ENST00000582242 NECTIN2Q92692 538 aa14.4□□□□□ -0.1
CDH8-207ENST00000582242 RNF40O75150 1001 aa14.39□□□□□ -0.11
CDH8-207ENST00000582242 KMT5BQ4FZB7 885 aa14.39□□□□□ -0.11
CDH8-207ENST00000582242 IRX2Q9BZI1 471 aaPredicted RBP14.39□□□□□ -0.11
CDH8-207ENST00000582242 ZNF330Q9Y3S2 320 aaPredicted RBP14.38□□□□□ -0.11
CDH8-207ENST00000582242 WWC1Q8IX03 1113 aa14.37□□□□□ -0.11
CDH8-207ENST00000582242 HELBQ8NG08 1087 aaPredicted RBP14.37□□□□□ -0.11
CDH8-207ENST00000582242 GJD4Q96KN9 370 aaPredicted RBP14.37□□□□□ -0.11
CDH8-207ENST00000582242 TBC1D2BQ9UPU7 963 aa14.36□□□□□ -0.11
CDH8-207ENST00000582242 C6orf229H3BNL8 230 aa14.35□□□□□ -0.11
CDH8-207ENST00000582242 CTDSPL2Q05D32 466 aa14.34□□□□□ -0.11
CDH8-207ENST00000582242 NDUFB9Q9Y6M9 179 aa14.34□□□□□ -0.11
CDH8-207ENST00000582242 CFAP99D6REC4 459 aa14.33□□□□□ -0.12
CDH8-207ENST00000582242 ACTN4O43707 911 aaKnown RBP14.33□□□□□ -0.12
CDH8-207ENST00000582242 ABL2P42684 1182 aa14.33□□□□□ -0.12
CDH8-207ENST00000582242 SERPINA10Q9UK55 444 aa14.33□□□□□ -0.12
CDH8-207ENST00000582242 MORN1Q5T089 497 aa14.32□□□□□ -0.12
CDH8-207ENST00000582242 CCDC180Q9P1Z9 1646 aa14.32□□□□□ -0.12
CDH8-207ENST00000582242 TJAP1Q5JTD0 557 aa14.31□□□□□ -0.12
CDH8-207ENST00000582242 CCDC97Q96F63 343 aaPredicted RBP14.31□□□□□ -0.12
CDH8-207ENST00000582242 PRR14Q9BWN1 585 aa14.31□□□□□ -0.12
CDH8-207ENST00000582242 HMX1Q9NP08 348 aaPredicted RBP14.31□□□□□ -0.12
CDH8-207ENST00000582242 TRIM34Q9BYJ4 488 aa14.29□□□□□ -0.12
CDH8-207ENST00000582242 RETREG3Q86VR2 466 aa14.28□□□□□ -0.12
CDH8-207ENST00000582242 TSC1Q92574 1164 aa14.28□□□□□ -0.12
CDH8-207ENST00000582242 SYMPKQ92797 1274 aaKnown RBP14.28□□□□□ -0.12
CDH8-207ENST00000582242 Q3C1V9 767 aa14.27□□□□□ -0.13
CDH8-207ENST00000582242 LRRN4Q8WUT4 740 aa14.27□□□□□ -0.13
CDH8-207ENST00000582242 PRR7Q8TB68 274 aa14.26□□□□□ -0.13
CDH8-207ENST00000582242 MTRQ99707 1265 aa14.26□□□□□ -0.13
CDH8-207ENST00000582242 SLC27A5Q9Y2P5 690 aa14.26□□□□□ -0.13
CDH8-207ENST00000582242 GPR37L1O60883 481 aa14.25□□□□□ -0.13
CDH8-207ENST00000582242 IRF5Q13568 498 aa14.25□□□□□ -0.13
CDH8-207ENST00000582242 PUS10Q3MIT2 529 aaKnown RBP14.25□□□□□ -0.13
CDH8-207ENST00000582242 IL21Q9HBE4 155 aa14.25□□□□□ -0.13
CDH8-207ENST00000582242 APLP1P51693 650 aa14.24□□□□□ -0.13
CDH8-207ENST00000582242 DESI1Q6ICB0 168 aa14.24□□□□□ -0.13
CDH8-207ENST00000582242 POM121CA8CG34 1229 aa14.22□□□□□ -0.13
CDH8-207ENST00000582242 WASHC4Q2M389 1173 aa14.21□□□□□ -0.13
CDH8-207ENST00000582242 SALL2Q9Y467 1007 aaPredicted RBP14.21□□□□□ -0.13
CDH8-207ENST00000582242 GLMNQ92990 594 aa14.2□□□□□ -0.14
CDH8-207ENST00000582242 CALR3Q96L12 384 aaKnown RBP14.19□□□□□ -0.14
CDH8-207ENST00000582242 PER1O15534 1290 aaPredicted RBP14.17□□□□□ -0.14
CDH8-207ENST00000582242 RNF19BQ6ZMZ0 732 aa14.17□□□□□ -0.14
CDH8-207ENST00000582242 EPS8L1Q8TE68 723 aa14.17□□□□□ -0.14
CDH8-207ENST00000582242 ZNF516Q92618 1163 aa14.17□□□□□ -0.14
CDH8-207ENST00000582242 BRICD5Q6PL45 260 aa14.16□□□□□ -0.14
CDH8-207ENST00000582242 BLOC1S3Q6QNY0 202 aa14.16□□□□□ -0.14
CDH8-207ENST00000582242 USB1Q9BQ65 265 aaKnown RBP14.15□□□□□ -0.14
CDH8-207ENST00000582242 NR6A1Q15406 480 aa14.14□□□□□ -0.15
CDH8-207ENST00000582242 PPP1R18Q6NYC8 613 aa14.14□□□□□ -0.15
CDH8-207ENST00000582242 LYPD8Q6UX82 237 aa14.14□□□□□ -0.15
CDH8-207ENST00000582242 PCDHB3Q9Y5E6 796 aa14.14□□□□□ -0.15
CDH8-207ENST00000582242 NR1I2O75469 434 aa14.13□□□□□ -0.15
CDH8-207ENST00000582242 THAP11Q96EK4 314 aa14.13□□□□□ -0.15
CDH8-207ENST00000582242 SCUBE3Q8IX30 993 aa14.12□□□□□ -0.15
CDH8-207ENST00000582242 ADAMTS19Q8TE59 1207 aa14.12□□□□□ -0.15
CDH8-207ENST00000582242 FMNL1O95466 1100 aaPredicted RBP14.11□□□□□ -0.15
CDH8-207ENST00000582242 VAC14Q08AM6 782 aa14.1□□□□□ -0.15
CDH8-207ENST00000582242 COPS2P61201 443 aa14.09□□□□□ -0.15
CDH8-207ENST00000582242 HDGFL1Q5TGJ6 251 aa14.09□□□□□ -0.15
CDH8-207ENST00000582242 Q6ZNB5 142 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms