RNA–Protein interactions for RNA: ENST00000581339.1

RIOK3-206, Transcript of RIO kinase 3, humanhuman

TSL 2

Gene RIOK3, Length 888 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-206ENST00000581339 ATP6V1AP38606 617 aa11.99□□□□□ -0.49
RIOK3-206ENST00000581339 PCDHB3Q9Y5E6 796 aa11.99□□□□□ -0.49
RIOK3-206ENST00000581339 CCDC88BA6NC98 1476 aa11.98□□□□□ -0.49
RIOK3-206ENST00000581339 HOXA2O43364 376 aa11.98□□□□□ -0.49
RIOK3-206ENST00000581339 MYSM1Q5VVJ2 828 aa11.97□□□□□ -0.49
RIOK3-206ENST00000581339 SH3D19Q5HYK7 790 aa11.96□□□□□ -0.49
RIOK3-206ENST00000581339 MOXD2PA6NHM9 499 aa11.95□□□□□ -0.5
RIOK3-206ENST00000581339 PUS10Q3MIT2 529 aaKnown RBP11.95□□□□□ -0.5
RIOK3-206ENST00000581339 MORN1Q5T089 497 aa11.94□□□□□ -0.5
RIOK3-206ENST00000581339 NR1I2O75469 434 aa11.93□□□□□ -0.5
RIOK3-206ENST00000581339 TMEM132AQ24JP5 1023 aa11.93□□□□□ -0.5
RIOK3-206ENST00000581339 BLOC1S3Q6QNY0 202 aa11.93□□□□□ -0.5
RIOK3-206ENST00000581339 GOPCQ9HD26 462 aa11.93□□□□□ -0.5
RIOK3-206ENST00000581339 ZNF608Q9ULD9 1512 aaPredicted RBP11.92□□□□□ -0.5
RIOK3-206ENST00000581339 SPTLC1O15269 473 aa11.92□□□□□ -0.5
RIOK3-206ENST00000581339 FDX1P10109 184 aa11.92□□□□□ -0.5
RIOK3-206ENST00000581339 NDUFV2P19404 249 aa11.92□□□□□ -0.5
RIOK3-206ENST00000581339 GJA5P36382 358 aa11.92□□□□□ -0.5
RIOK3-206ENST00000581339 COPS2P61201 443 aa11.92□□□□□ -0.5
RIOK3-206ENST00000581339 SKIV2LQ15477 1246 aaKnown RBP11.92□□□□□ -0.5
RIOK3-206ENST00000581339 RSBN1LQ6PCB5 846 aaPredicted RBP11.92□□□□□ -0.5
RIOK3-206ENST00000581339 RIC3Q7Z5B4 369 aa11.92□□□□□ -0.5
RIOK3-206ENST00000581339 HLA-CQ95604 372 aa11.92□□□□□ -0.5
RIOK3-206ENST00000581339 MTRQ99707 1265 aa11.92□□□□□ -0.5
RIOK3-206ENST00000581339 POLR3EQ9NVU0 708 aa11.92□□□□□ -0.5
RIOK3-206ENST00000581339 PRDM2Q13029 1718 aa11.91□□□□□ -0.5
RIOK3-206ENST00000581339 CLK2P49760 499 aaKnown RBP11.91□□□□□ -0.5
RIOK3-206ENST00000581339 GUCA2AQ02747 115 aa11.9□□□□□ -0.5
RIOK3-206ENST00000581339 SLC27A5Q9Y2P5 690 aa11.9□□□□□ -0.5
RIOK3-206ENST00000581339 PCMTD1Q96MG8 357 aaPredicted RBP11.89□□□□□ -0.51
RIOK3-206ENST00000581339 IL21Q9HBE4 155 aa11.89□□□□□ -0.51
RIOK3-206ENST00000581339 TOPBP1Q92547 1522 aa11.88□□□□□ -0.51
RIOK3-206ENST00000581339 Q3C1V9 767 aa11.88□□□□□ -0.51
RIOK3-206ENST00000581339 TJAP1Q5JTD0 557 aa11.88□□□□□ -0.51
RIOK3-206ENST00000581339 SCUBE3Q8IX30 993 aa11.88□□□□□ -0.51
RIOK3-206ENST00000581339 LIMD1Q9UGP4 676 aa11.88□□□□□ -0.51
RIOK3-206ENST00000581339 PLSCR2Q9NRY7 297 aa11.87□□□□□ -0.51
RIOK3-206ENST00000581339 ATP1B4Q9UN42 357 aaPredicted RBP11.87□□□□□ -0.51
RIOK3-206ENST00000581339 PCDHGC3Q9UN70 934 aa11.87□□□□□ -0.51
RIOK3-206ENST00000581339 TUSC1Q2TAM9 212 aa11.86□□□□□ -0.51
RIOK3-206ENST00000581339 IFT140Q96RY7 1462 aa11.86□□□□□ -0.51
RIOK3-206ENST00000581339 ZPR1O75312 459 aa11.85□□□□□ -0.51
RIOK3-206ENST00000581339 CSPP1Q1MSJ5 1256 aa11.85□□□□□ -0.51
RIOK3-206ENST00000581339 PROCA1Q8NCQ7 364 aaPredicted RBP11.85□□□□□ -0.51
RIOK3-206ENST00000581339 ITGBL1O95965 494 aaPredicted RBP11.84□□□□□ -0.51
RIOK3-206ENST00000581339 SALL2Q9Y467 1007 aaPredicted RBP11.84□□□□□ -0.51
RIOK3-206ENST00000581339 PCDHB15Q9Y5E8 787 aa11.84□□□□□ -0.51
RIOK3-206ENST00000581339 FMNL1O95466 1100 aaPredicted RBP11.83□□□□□ -0.52
RIOK3-206ENST00000581339 ZNF516Q92618 1163 aa11.83□□□□□ -0.52
RIOK3-206ENST00000581339 C6orf229H3BNL8 230 aa11.82□□□□□ -0.52
RIOK3-206ENST00000581339 KCNC4Q03721 635 aa11.82□□□□□ -0.52
RIOK3-206ENST00000581339 PRPF38BQ5VTL8 546 aaKnown RBP11.82□□□□□ -0.52
RIOK3-206ENST00000581339 BRICD5Q6PL45 260 aa11.82□□□□□ -0.52
RIOK3-206ENST00000581339 THAP11Q96EK4 314 aa11.82□□□□□ -0.52
RIOK3-206ENST00000581339 ZBTB3Q9H5J0 574 aa11.82□□□□□ -0.52
RIOK3-206ENST00000581339 RNF19BQ6ZMZ0 732 aa11.81□□□□□ -0.52
RIOK3-206ENST00000581339 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.81□□□□□ -0.52
RIOK3-206ENST00000581339 RIMBP3CA6NJZ7 1639 aa11.81□□□□□ -0.52
RIOK3-206ENST00000581339 RIMBP3BA6NNM3 1639 aa11.81□□□□□ -0.52
RIOK3-206ENST00000581339 RIMBP3Q9UFD9 1639 aa11.81□□□□□ -0.52
RIOK3-206ENST00000581339 DNMBPQ6XZF7 1577 aa11.8□□□□□ -0.52
RIOK3-206ENST00000581339 TLL1O43897 1013 aa11.8□□□□□ -0.52
RIOK3-206ENST00000581339 MTMR2Q13614 643 aa11.8□□□□□ -0.52
RIOK3-206ENST00000581339 QPCTQ16769 361 aa11.8□□□□□ -0.52
RIOK3-206ENST00000581339 AQRO60306 1485 aaKnown RBP eCLIP11.8□□□□□ -0.528e-6■□□□□ 11.2
RIOK3-206ENST00000581339 EIF4G3O43432 1585 aaKnown RBP11.79□□□□□ -0.52
RIOK3-206ENST00000581339 SPDYE5A6NIY4 337 aa11.79□□□□□ -0.52
RIOK3-206ENST00000581339 NUTM2BA6NNL0 878 aaPredicted RBP11.79□□□□□ -0.52
RIOK3-206ENST00000581339 NUTM2EB1AL46 878 aaPredicted RBP11.79□□□□□ -0.52
RIOK3-206ENST00000581339 HRCP23327 699 aa11.79□□□□□ -0.52
RIOK3-206ENST00000581339 NUTM2DQ5VT03 806 aaPredicted RBP11.79□□□□□ -0.52
RIOK3-206ENST00000581339 NUTM2AQ8IVF1 878 aaPredicted RBP11.79□□□□□ -0.52
RIOK3-206ENST00000581339 CABLES1Q8TDN4 633 aa11.79□□□□□ -0.52
RIOK3-206ENST00000581339 SYMPKQ92797 1274 aaKnown RBP11.79□□□□□ -0.52
RIOK3-206ENST00000581339 SPSB2Q99619 263 aa11.79□□□□□ -0.52
RIOK3-206ENST00000581339 TARBP1Q13395 1621 aaKnown RBP11.78□□□□□ -0.52
RIOK3-206ENST00000581339 LILRB3O75022 631 aa11.78□□□□□ -0.52
RIOK3-206ENST00000581339 RETREG3Q86VR2 466 aa11.78□□□□□ -0.52
RIOK3-206ENST00000581339 USB1Q9BQ65 265 aaKnown RBP11.78□□□□□ -0.52
RIOK3-206ENST00000581339 ABCC8Q09428 1581 aa11.77□□□□□ -0.53
RIOK3-206ENST00000581339 ADH1BP00325 375 aa11.77□□□□□ -0.53
RIOK3-206ENST00000581339 NKX2-3Q8TAU0 364 aa11.76□□□□□ -0.53
RIOK3-206ENST00000581339 POLA1P09884 1462 aaPredicted RBP11.76□□□□□ -0.53
RIOK3-206ENST00000581339 RAD54L2Q9Y4B4 1467 aa11.76□□□□□ -0.53
RIOK3-206ENST00000581339 ARHGEF11O15085 1522 aa11.76□□□□□ -0.53
RIOK3-206ENST00000581339 PPP2R2DQ66LE6 453 aa11.75□□□□□ -0.53
RIOK3-206ENST00000581339 CHD1O14646 1710 aa11.73□□□□□ -0.53
RIOK3-206ENST00000581339 MSS51Q4VC12 460 aa11.73□□□□□ -0.53
RIOK3-206ENST00000581339 RTL5Q5HYW3 569 aaPredicted RBP11.73□□□□□ -0.53
RIOK3-206ENST00000581339 PRR7Q8TB68 274 aa11.73□□□□□ -0.53
RIOK3-206ENST00000581339 PLA2G2EQ9NZK7 142 aa11.73□□□□□ -0.53
RIOK3-206ENST00000581339 FBXO31Q5XUX0 539 aaPredicted RBP11.72□□□□□ -0.53
RIOK3-206ENST00000581339 FAM160A2Q8N612 972 aaPredicted RBP11.72□□□□□ -0.53
RIOK3-206ENST00000581339 TDRD9Q8NDG6 1382 aaKnown RBP11.71□□□□□ -0.53
RIOK3-206ENST00000581339 CFAP99D6REC4 459 aa11.71□□□□□ -0.53
RIOK3-206ENST00000581339 IFFO2Q5TF58 517 aa11.71□□□□□ -0.53
RIOK3-206ENST00000581339 SLC6A16Q9GZN6 736 aa11.71□□□□□ -0.53
RIOK3-206ENST00000581339 RFC5P40937 340 aa11.7□□□□□ -0.54
RIOK3-206ENST00000581339 SOGA1O94964 1423 aa11.69□□□□□ -0.54
RIOK3-206ENST00000581339 CYB5RLQ6IPT4 315 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms