RNA–Protein interactions for RNA: ENST00000580248.5

TMCO1-207, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 2 BASIC

Gene TMCO1, Length 1,735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-207ENST00000580248 TBX22Q9Y458 520 aa23.61■■□□□ 1.37
TMCO1-207ENST00000580248 HSPA2P54652 639 aa23.6■■□□□ 1.37
TMCO1-207ENST00000580248 SLC26A8Q96RN1 970 aa23.59■■□□□ 1.37
TMCO1-207ENST00000580248 NCKAP5LQ9HCH0 1330 aa23.59■■□□□ 1.37
TMCO1-207ENST00000580248 MYOM1P52179 1685 aa23.59■■□□□ 1.37
TMCO1-207ENST00000580248 METP08581 1390 aa23.59■■□□□ 1.37
TMCO1-207ENST00000580248 DIP2AQ14689 1571 aa23.58■■□□□ 1.37
TMCO1-207ENST00000580248 NPC1L1Q9UHC9 1359 aa23.58■■□□□ 1.36
TMCO1-207ENST00000580248 NPHP4O75161 1426 aaPredicted RBP23.58■■□□□ 1.36
TMCO1-207ENST00000580248 YTHDC2Q9H6S0 1430 aaKnown RBP23.58■■□□□ 1.36
TMCO1-207ENST00000580248 TRAK1Q9UPV9 953 aa23.57■■□□□ 1.36
TMCO1-207ENST00000580248 KNSTRNQ9Y448 316 aa23.57■■□□□ 1.36
TMCO1-207ENST00000580248 STK26Q9P289 416 aa23.55■■□□□ 1.36
TMCO1-207ENST00000580248 CC2D1BQ5T0F9 858 aaKnown RBP23.54■■□□□ 1.36
TMCO1-207ENST00000580248 NUDCQ9Y266 331 aa23.53■■□□□ 1.36
TMCO1-207ENST00000580248 ABCC11Q96J66 1382 aa23.52■■□□□ 1.36
TMCO1-207ENST00000580248 PIK3R4Q99570 1358 aa23.51■■□□□ 1.35
TMCO1-207ENST00000580248 CENPJQ9HC77 1338 aaPredicted RBP23.51■■□□□ 1.35
TMCO1-207ENST00000580248 ARHGEF28Q8N1W1 1705 aaKnown RBP23.49■■□□□ 1.35
TMCO1-207ENST00000580248 AMER1Q5JTC6 1135 aaPredicted RBP23.49■■□□□ 1.35
TMCO1-207ENST00000580248 DLC1Q96QB1 1528 aa23.48■■□□□ 1.35
TMCO1-207ENST00000580248 TECPR2O15040 1411 aa23.48■■□□□ 1.35
TMCO1-207ENST00000580248 QRICH2Q9H0J4 1663 aa23.47■■□□□ 1.35
TMCO1-207ENST00000580248 PTPRUQ92729 1446 aa23.47■■□□□ 1.35
TMCO1-207ENST00000580248 PDE3BQ13370 1112 aa23.47■■□□□ 1.35
TMCO1-207ENST00000580248 SIRT1Q96EB6 747 aa23.47■■□□□ 1.35
TMCO1-207ENST00000580248 STRCQ7RTU9 1775 aa23.46■■□□□ 1.35
TMCO1-207ENST00000580248 KNDC1Q76NI1 1749 aa23.46■■□□□ 1.35
TMCO1-207ENST00000580248 BLMP54132 1417 aaPredicted RBP23.46■■□□□ 1.35
TMCO1-207ENST00000580248 PUS7Q96PZ0 661 aaKnown RBP23.45■■□□□ 1.34
TMCO1-207ENST00000580248 AMOTL2Q9Y2J4 779 aa23.45■■□□□ 1.34
TMCO1-207ENST00000580248 PRAM1Q96QH2 718 aa23.45■■□□□ 1.34
TMCO1-207ENST00000580248 POGKQ9P215 609 aa23.44■■□□□ 1.34
TMCO1-207ENST00000580248 FAM135BQ49AJ0 1406 aa23.43■■□□□ 1.34
TMCO1-207ENST00000580248 CPS1P31327 1500 aa23.43■■□□□ 1.34
TMCO1-207ENST00000580248 PPP2R1AP30153 589 aa23.42■■□□□ 1.34
TMCO1-207ENST00000580248 PPP4R2Q9NY27 417 aa23.42■■□□□ 1.34
TMCO1-207ENST00000580248 RNF123Q5XPI4 1314 aa23.42■■□□□ 1.34
TMCO1-207ENST00000580248 ROBO2Q9HCK4 1378 aa23.41■■□□□ 1.34
TMCO1-207ENST00000580248 XRN1Q8IZH2 1706 aaKnown RBP23.4■■□□□ 1.34
TMCO1-207ENST00000580248 CHD2O14647 1828 aaKnown RBP23.4■■□□□ 1.34
TMCO1-207ENST00000580248 WAPLQ7Z5K2 1190 aa23.4■■□□□ 1.34
TMCO1-207ENST00000580248 SAFB2Q14151 953 aaKnown RBP eCLIP23.39■■□□□ 1.34
TMCO1-207ENST00000580248 PTCH1Q13635 1447 aa23.38■■□□□ 1.33
TMCO1-207ENST00000580248 KCNA6P17658 529 aa23.38■■□□□ 1.33
TMCO1-207ENST00000580248 PLEKHH1Q9ULM0 1364 aa23.38■■□□□ 1.33
TMCO1-207ENST00000580248 IRX6P78412 446 aaPredicted RBP23.35■■□□□ 1.33
TMCO1-207ENST00000580248 TSHZ2Q9NRE2 1034 aa23.35■■□□□ 1.33
TMCO1-207ENST00000580248 DMRT2Q9Y5R5 561 aa23.35■■□□□ 1.33
TMCO1-207ENST00000580248 MINK1Q8N4C8 1332 aaPredicted RBP23.34■■□□□ 1.33
TMCO1-207ENST00000580248 AEBP2Q6ZN18 517 aaPredicted RBP23.33■■□□□ 1.33
TMCO1-207ENST00000580248 USP32Q8NFA0 1604 aa23.33■■□□□ 1.33
TMCO1-207ENST00000580248 NWD1Q149M9 1564 aa23.33■■□□□ 1.33
TMCO1-207ENST00000580248 EVC2Q86UK5 1308 aa23.33■■□□□ 1.33
TMCO1-207ENST00000580248 WDR43Q15061 677 aaKnown RBP eCLIP23.32■■□□□ 1.32
TMCO1-207ENST00000580248 CARD14Q9BXL6 1004 aa23.3■■□□□ 1.32
TMCO1-207ENST00000580248 TULP4Q9NRJ4 1543 aa23.29■■□□□ 1.32
TMCO1-207ENST00000580248 ADAMTS8Q9UP79 889 aa23.28■■□□□ 1.32
TMCO1-207ENST00000580248 NKTRP30414 1462 aaKnown RBP23.27■■□□□ 1.32
TMCO1-207ENST00000580248 NINLQ9Y2I6 1382 aa23.27■■□□□ 1.32
TMCO1-207ENST00000580248 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.27■■□□□ 1.32
TMCO1-207ENST00000580248 CDK19Q9BWU1 502 aa23.25■■□□□ 1.31
TMCO1-207ENST00000580248 ADGRB2O60241 1585 aa23.24■■□□□ 1.31
TMCO1-207ENST00000580248 NSD3Q9BZ95 1437 aa23.24■■□□□ 1.31
TMCO1-207ENST00000580248 WASLO00401 505 aaPredicted RBP23.24■■□□□ 1.31
TMCO1-207ENST00000580248 STRCP1A6NGW2 1772 aa23.23■■□□□ 1.31
TMCO1-207ENST00000580248 SRPK2P78362 688 aaKnown RBP23.23■■□□□ 1.31
TMCO1-207ENST00000580248 PROSER2Q86WR7 435 aaPredicted RBP23.23■■□□□ 1.31
TMCO1-207ENST00000580248 CABP2Q9NPB3 220 aa23.22■■□□□ 1.31
TMCO1-207ENST00000580248 POLR3AO14802 1390 aaPredicted RBP23.22■■□□□ 1.31
TMCO1-207ENST00000580248 NSD2O96028 1365 aa23.22■■□□□ 1.31
TMCO1-207ENST00000580248 ANKRD36BQ8N2N9 1353 aa23.22■■□□□ 1.31
TMCO1-207ENST00000580248 NGEFQ8N5V2 710 aa23.21■■□□□ 1.31
TMCO1-207ENST00000580248 SLC12A5Q9H2X9 1139 aa23.21■■□□□ 1.31
TMCO1-207ENST00000580248 RCAN3Q9UKA8 241 aa23.21■■□□□ 1.31
TMCO1-207ENST00000580248 RBM33Q96EV2 1170 aaKnown RBP23.2■■□□□ 1.3
TMCO1-207ENST00000580248 ZNF335Q9H4Z2 1342 aaPredicted RBP23.2■■□□□ 1.3
TMCO1-207ENST00000580248 CGNL1Q0VF96 1302 aa23.19■■□□□ 1.3
TMCO1-207ENST00000580248 SENP3-EIF4A1A0A087X0R7 540 aa23.19■■□□□ 1.3
TMCO1-207ENST00000580248 ATAD2Q6PL18 1390 aa23.18■■□□□ 1.3
TMCO1-207ENST00000580248 SALL2Q9Y467 1007 aaPredicted RBP23.18■■□□□ 1.3
TMCO1-207ENST00000580248 MORC1Q86VD1 984 aa23.17■■□□□ 1.3
TMCO1-207ENST00000580248 ADGRL3Q9HAR2 1447 aa23.17■■□□□ 1.3
TMCO1-207ENST00000580248 NCOA3Q9Y6Q9 1424 aa23.17■■□□□ 1.3
TMCO1-207ENST00000580248 RRP1P56182 461 aaKnown RBP23.16■■□□□ 1.3
TMCO1-207ENST00000580248 NALCNQ8IZF0 1738 aa23.16■■□□□ 1.3
TMCO1-207ENST00000580248 TMEM94Q12767 1356 aa23.15■■□□□ 1.3
TMCO1-207ENST00000580248 C14orf37Q86TY3 774 aa23.15■■□□□ 1.3
TMCO1-207ENST00000580248 CDCA7LQ96GN5 454 aa23.13■■□□□ 1.29
TMCO1-207ENST00000580248 ZNF521Q96K83 1311 aa23.13■■□□□ 1.29
TMCO1-207ENST00000580248 NUDT16Q96DE0 195 aaKnown RBP23.13■■□□□ 1.29
TMCO1-207ENST00000580248 CDC42BPGQ6DT37 1551 aa23.13■■□□□ 1.29
TMCO1-207ENST00000580248 B4GALNT3Q6L9W6 998 aa23.11■■□□□ 1.29
TMCO1-207ENST00000580248 C19orf44Q9H6X5 657 aa23.11■■□□□ 1.29
TMCO1-207ENST00000580248 LRRC7Q96NW7 1537 aa23.11■■□□□ 1.29
TMCO1-207ENST00000580248 CCDC61Q9Y6R9 512 aa23.11■■□□□ 1.29
TMCO1-207ENST00000580248 PRR36Q9H6K5 1346 aa23.1■■□□□ 1.29
TMCO1-207ENST00000580248 ATP7BP35670 1465 aa23.1■■□□□ 1.29
TMCO1-207ENST00000580248 GOLGA2Q08379 1002 aa23.09■■□□□ 1.29
TMCO1-207ENST00000580248 CABP1Q9NZU7 370 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms