RNA–Protein interactions for RNA: ENST00000580104.5

TRAPPC8-207, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 5,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-207ENST00000580104 WDR63Q8IWG1 891 aa16.65■□□□□ 0.26
TRAPPC8-207ENST00000580104 ESPNB1AK53 854 aa16.65■□□□□ 0.26
TRAPPC8-207ENST00000580104 HSP90B1P14625 803 aaKnown RBP16.65■□□□□ 0.26
TRAPPC8-207ENST00000580104 NGDNQ8NEJ9 315 aaKnown RBP16.64■□□□□ 0.25
TRAPPC8-207ENST00000580104 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.63■□□□□ 0.25
TRAPPC8-207ENST00000580104 TMEM57Q8N5G2 664 aa16.63■□□□□ 0.25
TRAPPC8-207ENST00000580104 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.63■□□□□ 0.25
TRAPPC8-207ENST00000580104 C8orf34Q49A92 452 aa16.62■□□□□ 0.25
TRAPPC8-207ENST00000580104 ARHGEF11O15085 1522 aa16.62■□□□□ 0.25
TRAPPC8-207ENST00000580104 LRPPRCP42704 1394 aaKnown RBP16.62■□□□□ 0.25
TRAPPC8-207ENST00000580104 NEK4P51957 841 aa16.62■□□□□ 0.25
TRAPPC8-207ENST00000580104 FKBP5Q13451 457 aaPredicted RBP16.62■□□□□ 0.25
TRAPPC8-207ENST00000580104 CSPP1Q1MSJ5 1256 aa16.62■□□□□ 0.25
TRAPPC8-207ENST00000580104 CHD1LQ86WJ1 897 aa16.62■□□□□ 0.25
TRAPPC8-207ENST00000580104 DNAJC5BQ9UF47 199 aa16.62■□□□□ 0.25
TRAPPC8-207ENST00000580104 CCDC9Q9Y3X0 531 aaKnown RBP16.62■□□□□ 0.25
TRAPPC8-207ENST00000580104 BCL11BQ9C0K0 894 aaPredicted RBP16.61■□□□□ 0.25
TRAPPC8-207ENST00000580104 NKTRP30414 1462 aaKnown RBP16.61■□□□□ 0.25
TRAPPC8-207ENST00000580104 PLB1Q6P1J6 1458 aa16.61■□□□□ 0.25
TRAPPC8-207ENST00000580104 EIF2S2P20042 333 aaKnown RBP16.61■□□□□ 0.25
TRAPPC8-207ENST00000580104 K7ELQ4 463 aaPredicted RBP16.61■□□□□ 0.25
TRAPPC8-207ENST00000580104 DHX29Q7Z478 1369 aaKnown RBP16.61■□□□□ 0.25
TRAPPC8-207ENST00000580104 GPATCH3Q96I76 525 aa16.6■□□□□ 0.25
TRAPPC8-207ENST00000580104 NINLQ9Y2I6 1382 aa16.6■□□□□ 0.25
TRAPPC8-207ENST00000580104 TWISTNBQ3B726 338 aaPredicted RBP16.6■□□□□ 0.25
TRAPPC8-207ENST00000580104 SYNJ2O15056 1496 aa16.6■□□□□ 0.25
TRAPPC8-207ENST00000580104 VPS37CA5D8V6 355 aaPredicted RBP16.59■□□□□ 0.25
TRAPPC8-207ENST00000580104 SSH1Q8WYL5 1049 aa16.59■□□□□ 0.25
TRAPPC8-207ENST00000580104 IQGAP2Q13576 1575 aa16.59■□□□□ 0.25
TRAPPC8-207ENST00000580104 GNL2Q13823 731 aaKnown RBP16.59■□□□□ 0.25
TRAPPC8-207ENST00000580104 DIAPH3Q9NSV4 1193 aa16.58■□□□□ 0.25
TRAPPC8-207ENST00000580104 HTATSF1O43719 755 aaKnown RBP16.58■□□□□ 0.24
TRAPPC8-207ENST00000580104 ZNF592Q92610 1267 aa16.58■□□□□ 0.24
TRAPPC8-207ENST00000580104 ATP6V1DQ9Y5K8 247 aa16.58■□□□□ 0.24
TRAPPC8-207ENST00000580104 CCDC173Q0VFZ6 552 aa16.58■□□□□ 0.24
TRAPPC8-207ENST00000580104 GCC1Q96CN9 775 aa16.58■□□□□ 0.24
TRAPPC8-207ENST00000580104 THOC2Q8NI27 1593 aaKnown RBP16.58■□□□□ 0.24
TRAPPC8-207ENST00000580104 THUMPD2Q9BTF0 503 aaKnown RBP16.58■□□□□ 0.24
TRAPPC8-207ENST00000580104 CC2D2AQ9P2K1 1620 aa16.57■□□□□ 0.24
TRAPPC8-207ENST00000580104 NSD3Q9BZ95 1437 aa16.57■□□□□ 0.24
TRAPPC8-207ENST00000580104 RABEP1Q15276 862 aa16.57■□□□□ 0.24
TRAPPC8-207ENST00000580104 ZNF330Q9Y3S2 320 aaPredicted RBP16.57■□□□□ 0.24
TRAPPC8-207ENST00000580104 SNAPC4Q5SXM2 1469 aa16.57■□□□□ 0.24
TRAPPC8-207ENST00000580104 UNC13AQ9UPW8 1703 aa16.56■□□□□ 0.24
TRAPPC8-207ENST00000580104 TSPYL4Q9UJ04 414 aa16.56■□□□□ 0.24
TRAPPC8-207ENST00000580104 TMPOP42166 694 aaKnown RBP16.56■□□□□ 0.24
TRAPPC8-207ENST00000580104 PCDHB15Q9Y5E8 787 aa16.56■□□□□ 0.24
TRAPPC8-207ENST00000580104 CUL7Q14999 1698 aa16.55■□□□□ 0.24
TRAPPC8-207ENST00000580104 SEC24BO95487 1268 aa16.55■□□□□ 0.24
TRAPPC8-207ENST00000580104 CCDC27Q2M243 656 aa16.55■□□□□ 0.24
TRAPPC8-207ENST00000580104 PRAM1Q96QH2 718 aa16.55■□□□□ 0.24
TRAPPC8-207ENST00000580104 SMC3Q9UQE7 1217 aa16.55■□□□□ 0.24
TRAPPC8-207ENST00000580104 SCAPERQ9BY12 1400 aa16.55■□□□□ 0.24
TRAPPC8-207ENST00000580104 UGGT2Q9NYU1 1516 aa16.54■□□□□ 0.24
TRAPPC8-207ENST00000580104 PLEKHH2Q8IVE3 1493 aa16.54■□□□□ 0.24
TRAPPC8-207ENST00000580104 PANK2Q9BZ23 570 aa16.54■□□□□ 0.24
TRAPPC8-207ENST00000580104 TNNQ9UQP3 1299 aa16.54■□□□□ 0.24
TRAPPC8-207ENST00000580104 H3BQV1 296 aa16.54■□□□□ 0.24
TRAPPC8-207ENST00000580104 IFFO2Q5TF58 517 aa16.54■□□□□ 0.24
TRAPPC8-207ENST00000580104 TBC1D32Q96NH3 1257 aa16.54■□□□□ 0.24
TRAPPC8-207ENST00000580104 KIAA0586Q9BVV6 1533 aa16.53■□□□□ 0.24
TRAPPC8-207ENST00000580104 TPM2P07951 284 aa16.53■□□□□ 0.24
TRAPPC8-207ENST00000580104 PARD3Q8TEW0 1356 aa16.53■□□□□ 0.24
TRAPPC8-207ENST00000580104 PKNOX2Q96KN3 472 aa16.53■□□□□ 0.24
TRAPPC8-207ENST00000580104 CABP1Q9NZU7 370 aa16.53■□□□□ 0.24
TRAPPC8-207ENST00000580104 CCDC39Q9UFE4 941 aa16.53■□□□□ 0.24
TRAPPC8-207ENST00000580104 TNPO1Q92973 898 aaKnown RBP16.53■□□□□ 0.24
TRAPPC8-207ENST00000580104 TRIM27P14373 513 aa16.52■□□□□ 0.24
TRAPPC8-207ENST00000580104 PLEKHH1Q9ULM0 1364 aa16.52■□□□□ 0.23
TRAPPC8-207ENST00000580104 GOLGA6L19H0YKK7 550 aa16.52■□□□□ 0.23
TRAPPC8-207ENST00000580104 BECN2A8MW95 431 aa16.51■□□□□ 0.23
TRAPPC8-207ENST00000580104 CT47B1P0C2W7 299 aaPredicted RBP16.51■□□□□ 0.23
TRAPPC8-207ENST00000580104 SSFA2P28290 1259 aa16.51■□□□□ 0.23
TRAPPC8-207ENST00000580104 ZKSCAN1P17029 563 aaPredicted RBP16.51■□□□□ 0.23
TRAPPC8-207ENST00000580104 FAM184AQ8NB25 1140 aa16.51■□□□□ 0.23
TRAPPC8-207ENST00000580104 ISY1Q9ULR0 285 aaKnown RBP16.51■□□□□ 0.23
TRAPPC8-207ENST00000580104 CIZ1Q9ULV3 898 aaPredicted RBP16.51■□□□□ 0.23
TRAPPC8-207ENST00000580104 SF3A1Q15459 793 aaKnown RBP16.5■□□□□ 0.23
TRAPPC8-207ENST00000580104 FBXW7Q969H0 707 aa16.5■□□□□ 0.23
TRAPPC8-207ENST00000580104 SPINK5Q9NQ38 1064 aaPredicted RBP16.5■□□□□ 0.23
TRAPPC8-207ENST00000580104 XRCC6P12956 609 aaKnown RBP eCLIP16.5■□□□□ 0.23
TRAPPC8-207ENST00000580104 RNF123Q5XPI4 1314 aa16.5■□□□□ 0.23
TRAPPC8-207ENST00000580104 BICD2Q8TD16 824 aa16.5■□□□□ 0.23
TRAPPC8-207ENST00000580104 C9orf78Q9NZ63 289 aaPredicted RBP16.5■□□□□ 0.23
TRAPPC8-207ENST00000580104 ADGRF5Q8IZF2 1346 aa16.5■□□□□ 0.23
TRAPPC8-207ENST00000580104 FIBPO43427 364 aa16.5■□□□□ 0.23
TRAPPC8-207ENST00000580104 MAGI1Q96QZ7 1491 aaPredicted RBP16.49■□□□□ 0.23
TRAPPC8-207ENST00000580104 MBD3O95983 291 aa16.49■□□□□ 0.23
TRAPPC8-207ENST00000580104 FOSBP53539 338 aa16.49■□□□□ 0.23
TRAPPC8-207ENST00000580104 PER1O15534 1290 aaPredicted RBP16.49■□□□□ 0.23
TRAPPC8-207ENST00000580104 SLC4A2P04920 1241 aa16.49■□□□□ 0.23
TRAPPC8-207ENST00000580104 GORABQ5T7V8 394 aa16.49■□□□□ 0.23
TRAPPC8-207ENST00000580104 TSPY26PQ9H489 355 aa16.48■□□□□ 0.23
TRAPPC8-207ENST00000580104 CCDC141Q6ZP82 1450 aa16.48■□□□□ 0.23
TRAPPC8-207ENST00000580104 RALGAPBQ86X10 1494 aa16.48■□□□□ 0.23
TRAPPC8-207ENST00000580104 IFIT2P09913 472 aaKnown RBP16.48■□□□□ 0.23
TRAPPC8-207ENST00000580104 GPRASP1Q5JY77 1395 aa16.48■□□□□ 0.23
TRAPPC8-207ENST00000580104 RUFY2Q8WXA3 655 aa16.47■□□□□ 0.23
TRAPPC8-207ENST00000580104 TESK2Q96S53 571 aa16.47■□□□□ 0.23
TRAPPC8-207ENST00000580104 IFT57Q9NWB7 429 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms