RNA–Protein interactions for RNA: ENST00000578861.5

SNX11-205, Transcript of sorting nexin 11, humanhuman

TSL 4

Gene SNX11, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-205ENST00000578861 SPON1Q9HCB6 807 aa13.82□□□□□ -0.2
SNX11-205ENST00000578861 CROCC2H7BZ55 1655 aa13.82□□□□□ -0.2
SNX11-205ENST00000578861 ESCO1Q5FWF5 840 aa13.81□□□□□ -0.2
SNX11-205ENST00000578861 CHIC2Q9UKJ5 165 aa13.81□□□□□ -0.2
SNX11-205ENST00000578861 FOXO3O43524 673 aa13.8□□□□□ -0.2
SNX11-205ENST00000578861 ONECUT3O60422 494 aaPredicted RBP13.8□□□□□ -0.2
SNX11-205ENST00000578861 FAM98CQ17RN3 349 aaKnown RBP13.8□□□□□ -0.2
SNX11-205ENST00000578861 PTPN23Q9H3S7 1636 aa13.79□□□□□ -0.2
SNX11-205ENST00000578861 NPHP3Q7Z494 1330 aa13.79□□□□□ -0.2
SNX11-205ENST00000578861 RPRD2Q5VT52 1461 aaKnown RBP13.79□□□□□ -0.2
SNX11-205ENST00000578861 KCNQ2O43526 872 aa13.78□□□□□ -0.2
SNX11-205ENST00000578861 APLP2Q06481 763 aa13.78□□□□□ -0.2
SNX11-205ENST00000578861 NBPF8Q3BBV2 869 aa13.78□□□□□ -0.2
SNX11-205ENST00000578861 NBPF14Q5TI25 921 aa13.78□□□□□ -0.2
SNX11-205ENST00000578861 METP08581 1390 aa13.78□□□□□ -0.2
SNX11-205ENST00000578861 LMTK2Q8IWU2 1503 aa13.78□□□□□ -0.2
SNX11-205ENST00000578861 BRWD3Q6RI45 1802 aa13.77□□□□□ -0.21
SNX11-205ENST00000578861 NINLQ9Y2I6 1382 aa13.77□□□□□ -0.21
SNX11-205ENST00000578861 SLIT2O94813 1529 aa13.76□□□□□ -0.21
SNX11-205ENST00000578861 ABCC5O15440 1437 aa13.76□□□□□ -0.21
SNX11-205ENST00000578861 APBA3O96018 575 aa13.76□□□□□ -0.21
SNX11-205ENST00000578861 CAMKK2Q96RR4 588 aa13.76□□□□□ -0.21
SNX11-205ENST00000578861 GIGYF1O75420 1035 aaPredicted RBP13.75□□□□□ -0.21
SNX11-205ENST00000578861 TRIM37O94972 964 aa13.75□□□□□ -0.21
SNX11-205ENST00000578861 TMEM131LA2VDJ0 1609 aa13.75□□□□□ -0.21
SNX11-205ENST00000578861 ZNF326Q5BKZ1 582 aaKnown RBP13.74□□□□□ -0.21
SNX11-205ENST00000578861 DAPK1P53355 1430 aa13.73□□□□□ -0.21
SNX11-205ENST00000578861 CABLES1Q8TDN4 633 aa13.73□□□□□ -0.21
SNX11-205ENST00000578861 SPHKAPQ2M3C7 1700 aa13.73□□□□□ -0.21
SNX11-205ENST00000578861 GCC2Q8IWJ2 1684 aa13.72□□□□□ -0.21
SNX11-205ENST00000578861 COL22A1Q8NFW1 1626 aaPredicted RBP13.72□□□□□ -0.21
SNX11-205ENST00000578861 MYO5BQ9ULV0 1848 aa13.72□□□□□ -0.21
SNX11-205ENST00000578861 NUTM2FA1L443 756 aa13.72□□□□□ -0.21
SNX11-205ENST00000578861 LMOD2Q6P5Q4 547 aa13.7□□□□□ -0.22
SNX11-205ENST00000578861 ANKRD30AQ9BXX3 1397 aa13.7□□□□□ -0.22
SNX11-205ENST00000578861 LRPPRCP42704 1394 aaKnown RBP13.69□□□□□ -0.22
SNX11-205ENST00000578861 CEP350Q5VT06 3117 aa13.68□□□□□ -0.22
SNX11-205ENST00000578861 XRN1Q8IZH2 1706 aaKnown RBP13.68□□□□□ -0.22
SNX11-205ENST00000578861 DISP2A7MBM2 1401 aa13.68□□□□□ -0.22
SNX11-205ENST00000578861 PXDNQ92626 1479 aa13.67□□□□□ -0.22
SNX11-205ENST00000578861 CAMTA1Q9Y6Y1 1673 aa13.67□□□□□ -0.22
SNX11-205ENST00000578861 FAM83GA6ND36 823 aa13.67□□□□□ -0.22
SNX11-205ENST00000578861 LAMC1P11047 1609 aa13.67□□□□□ -0.22
SNX11-205ENST00000578861 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.67□□□□□ -0.22
SNX11-205ENST00000578861 SPATA31A3Q5VYP0 1347 aa13.66□□□□□ -0.22
SNX11-205ENST00000578861 FAM196AQ6ZSG2 479 aa13.66□□□□□ -0.22
SNX11-205ENST00000578861 NALCNQ8IZF0 1738 aa13.66□□□□□ -0.22
SNX11-205ENST00000578861 CAPN15O75808 1086 aa13.65□□□□□ -0.22
SNX11-205ENST00000578861 FAM50AQ14320 339 aaKnown RBP13.65□□□□□ -0.22
SNX11-205ENST00000578861 KRT28Q7Z3Y7 464 aa13.65□□□□□ -0.22
SNX11-205ENST00000578861 BTG4Q9NY30 223 aa13.65□□□□□ -0.22
SNX11-205ENST00000578861 ROBO2Q9HCK4 1378 aa13.65□□□□□ -0.22
SNX11-205ENST00000578861 ADGRL2O95490 1459 aa13.64□□□□□ -0.23
SNX11-205ENST00000578861 MARF1Q9Y4F3 1742 aaKnown RBP13.64□□□□□ -0.23
SNX11-205ENST00000578861 PARD3Q8TEW0 1356 aa13.63□□□□□ -0.23
SNX11-205ENST00000578861 ZBTB7AO95365 584 aa13.63□□□□□ -0.23
SNX11-205ENST00000578861 ATF5Q9Y2D1 282 aaPredicted RBP13.62□□□□□ -0.23
SNX11-205ENST00000578861 RGPD1P0DJD0 1748 aa13.61□□□□□ -0.23
SNX11-205ENST00000578861 SYT17Q9BSW7 474 aa13.61□□□□□ -0.23
SNX11-205ENST00000578861 FHDC1Q9C0D6 1143 aaPredicted RBP13.61□□□□□ -0.23
SNX11-205ENST00000578861 GPR162Q16538 588 aa13.59□□□□□ -0.23
SNX11-205ENST00000578861 USP32Q8NFA0 1604 aa13.59□□□□□ -0.23
SNX11-205ENST00000578861 NRXN3Q9Y4C0 1643 aa13.58□□□□□ -0.24
SNX11-205ENST00000578861 PSME1Q06323 249 aa13.58□□□□□ -0.24
SNX11-205ENST00000578861 PDGFDQ9GZP0 370 aaPredicted RBP13.58□□□□□ -0.24
SNX11-205ENST00000578861 SPATA31A5Q5VU36 1347 aa13.58□□□□□ -0.24
SNX11-205ENST00000578861 SPATA31A7Q8IWB4 1347 aa13.58□□□□□ -0.24
SNX11-205ENST00000578861 ADGRB2O60241 1585 aa13.58□□□□□ -0.24
SNX11-205ENST00000578861 ANKRD50Q9ULJ7 1429 aa13.57□□□□□ -0.24
SNX11-205ENST00000578861 PDE3BQ13370 1112 aa13.57□□□□□ -0.24
SNX11-205ENST00000578861 PELP1Q8IZL8 1130 aaKnown RBP13.56□□□□□ -0.24
SNX11-205ENST00000578861 UTRNP46939 3433 aa13.54□□□□□ -0.24
SNX11-205ENST00000578861 PTGER2P43116 358 aa13.54□□□□□ -0.24
SNX11-205ENST00000578861 USP35Q9P2H5 1018 aa13.54□□□□□ -0.24
SNX11-205ENST00000578861 HFM1A2PYH4 1435 aa13.54□□□□□ -0.24
SNX11-205ENST00000578861 CCDC144AA2RUR9 1427 aa13.54□□□□□ -0.24
SNX11-205ENST00000578861 E9PCH4 1651 aa13.53□□□□□ -0.24
SNX11-205ENST00000578861 TNS1Q9HBL0 1735 aaKnown RBP13.53□□□□□ -0.24
SNX11-205ENST00000578861 BCL11BQ9C0K0 894 aaPredicted RBP13.53□□□□□ -0.24
SNX11-205ENST00000578861 STK26Q9P289 416 aa13.53□□□□□ -0.24
SNX11-205ENST00000578861 WAPLQ7Z5K2 1190 aa13.52□□□□□ -0.25
SNX11-205ENST00000578861 ANO8Q9HCE9 1232 aaPredicted RBP13.52□□□□□ -0.25
SNX11-205ENST00000578861 STRN4Q9NRL3 753 aa13.52□□□□□ -0.25
SNX11-205ENST00000578861 TNS3Q68CZ2 1445 aa13.52□□□□□ -0.25
SNX11-205ENST00000578861 NRKQ7Z2Y5 1582 aa13.52□□□□□ -0.25
SNX11-205ENST00000578861 PLCH1Q4KWH8 1693 aa13.51□□□□□ -0.25
SNX11-205ENST00000578861 HSPA6P17066 643 aa13.51□□□□□ -0.25
SNX11-205ENST00000578861 ITGAEP38570 1179 aa13.51□□□□□ -0.25
SNX11-205ENST00000578861 NAIPQ13075 1403 aa13.5□□□□□ -0.25
SNX11-205ENST00000578861 PHF8Q9UPP1 1060 aa13.5□□□□□ -0.25
SNX11-205ENST00000578861 ARHGEF10O15013 1369 aa13.49□□□□□ -0.25
SNX11-205ENST00000578861 VGFO15240 615 aaPredicted RBP13.49□□□□□ -0.25
SNX11-205ENST00000578861 PPARGC1BQ86YN6 1023 aaKnown RBP13.49□□□□□ -0.25
SNX11-205ENST00000578861 KLHL34Q8N239 644 aa13.49□□□□□ -0.25
SNX11-205ENST00000578861 NWD2Q9ULI1 1742 aa13.49□□□□□ -0.25
SNX11-205ENST00000578861 IQGAP3Q86VI3 1631 aa13.49□□□□□ -0.25
SNX11-205ENST00000578861 SPATA31A1Q5TZJ5 1347 aa13.48□□□□□ -0.25
SNX11-205ENST00000578861 PRDM11Q9NQV5 511 aa13.48□□□□□ -0.25
SNX11-205ENST00000578861 ARXQ96QS3 562 aa13.47□□□□□ -0.25
SNX11-205ENST00000578861 NUP188Q5SRE5 1749 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms