RNA–Protein interactions for RNA: ENST00000573891.6

CACNA1A-203, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 896 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-203ENST00000573891 ATF3P18847 181 aa9.26□□□□□ -0.93
CACNA1A-203ENST00000573891 AMOTL2Q9Y2J4 779 aa9.26□□□□□ -0.93
CACNA1A-203ENST00000573891 SETBP1Q9Y6X0 1596 aa9.25□□□□□ -0.93
CACNA1A-203ENST00000573891 ZNF772Q68DY9 489 aaPredicted RBP9.25□□□□□ -0.93
CACNA1A-203ENST00000573891 BRINP3Q76B58 766 aa9.25□□□□□ -0.93
CACNA1A-203ENST00000573891 SHPRHQ149N8 1683 aa9.25□□□□□ -0.93
CACNA1A-203ENST00000573891 XRN1Q8IZH2 1706 aaKnown RBP9.25□□□□□ -0.93
CACNA1A-203ENST00000573891 NRXN3Q9Y4C0 1643 aa9.24□□□□□ -0.93
CACNA1A-203ENST00000573891 RGL2O15211 777 aa9.24□□□□□ -0.93
CACNA1A-203ENST00000573891 MEX3CQ5U5Q3 659 aaKnown RBP9.24□□□□□ -0.93
CACNA1A-203ENST00000573891 ZBTB12Q9Y330 459 aaPredicted RBP9.24□□□□□ -0.93
CACNA1A-203ENST00000573891 MST1RQ04912 1400 aa9.23□□□□□ -0.93
CACNA1A-203ENST00000573891 SETD5Q9C0A6 1442 aa9.23□□□□□ -0.93
CACNA1A-203ENST00000573891 ASXL1Q8IXJ9 1541 aa9.23□□□□□ -0.93
CACNA1A-203ENST00000573891 CAPN15O75808 1086 aa9.23□□□□□ -0.93
CACNA1A-203ENST00000573891 CDK12Q9NYV4 1490 aaPredicted RBP9.22□□□□□ -0.93
CACNA1A-203ENST00000573891 UPF1Q92900 1129 aaKnown RBP eCLIP9.22□□□□□ -0.93
CACNA1A-203ENST00000573891 METP08581 1390 aa9.22□□□□□ -0.93
CACNA1A-203ENST00000573891 ADGRL3Q9HAR2 1447 aa9.22□□□□□ -0.93
CACNA1A-203ENST00000573891 DSG3P32926 999 aa9.21□□□□□ -0.94
CACNA1A-203ENST00000573891 SPRYD3Q8NCJ5 442 aa9.21□□□□□ -0.94
CACNA1A-203ENST00000573891 TRIM52Q96A61 297 aa9.2□□□□□ -0.94
CACNA1A-203ENST00000573891 TSHZ2Q9NRE2 1034 aa9.2□□□□□ -0.94
CACNA1A-203ENST00000573891 NHSL1Q5SYE7 1610 aa9.2□□□□□ -0.94
CACNA1A-203ENST00000573891 SPHKAPQ2M3C7 1700 aa9.19□□□□□ -0.94
CACNA1A-203ENST00000573891 NUTM2BA6NNL0 878 aaPredicted RBP9.19□□□□□ -0.94
CACNA1A-203ENST00000573891 NUTM2EB1AL46 878 aaPredicted RBP9.19□□□□□ -0.94
CACNA1A-203ENST00000573891 RXRBP28702 533 aa9.19□□□□□ -0.94
CACNA1A-203ENST00000573891 ITGAEP38570 1179 aa9.19□□□□□ -0.94
CACNA1A-203ENST00000573891 NUTM2AQ8IVF1 878 aaPredicted RBP9.19□□□□□ -0.94
CACNA1A-203ENST00000573891 LRRC59Q96AG4 307 aaKnown RBP9.19□□□□□ -0.94
CACNA1A-203ENST00000573891 AFF2P51816 1311 aa9.19□□□□□ -0.94
CACNA1A-203ENST00000573891 NEXMIFQ5QGS0 1516 aa9.19□□□□□ -0.94
CACNA1A-203ENST00000573891 CLTCL1P53675 1640 aa9.18□□□□□ -0.94
CACNA1A-203ENST00000573891 ZNF326Q5BKZ1 582 aaKnown RBP9.18□□□□□ -0.94
CACNA1A-203ENST00000573891 PNPLA6Q8IY17 1366 aa9.18□□□□□ -0.94
CACNA1A-203ENST00000573891 PTCH1Q13635 1447 aa9.17□□□□□ -0.94
CACNA1A-203ENST00000573891 PRAG1Q86YV5 1406 aa9.17□□□□□ -0.94
CACNA1A-203ENST00000573891 DDX17Q92841 729 aaKnown RBP9.17□□□□□ -0.94
CACNA1A-203ENST00000573891 C1orf167Q5SNV9 1468 aa9.16□□□□□ -0.94
CACNA1A-203ENST00000573891 RGS12O14924 1447 aa9.16□□□□□ -0.94
CACNA1A-203ENST00000573891 NALCNQ8IZF0 1738 aa9.16□□□□□ -0.94
CACNA1A-203ENST00000573891 LAMC1P11047 1609 aa9.16□□□□□ -0.94
CACNA1A-203ENST00000573891 NAIPQ13075 1403 aa9.15□□□□□ -0.94
CACNA1A-203ENST00000573891 PLCD3Q8N3E9 789 aa9.15□□□□□ -0.94
CACNA1A-203ENST00000573891 C8orf37Q96NL8 207 aa9.15□□□□□ -0.94
CACNA1A-203ENST00000573891 RRBP1Q9P2E9 1410 aaKnown RBP9.14□□□□□ -0.95
CACNA1A-203ENST00000573891 ROBO2Q9HCK4 1378 aa9.14□□□□□ -0.95
CACNA1A-203ENST00000573891 SOS2Q07890 1332 aaPredicted RBP9.14□□□□□ -0.95
CACNA1A-203ENST00000573891 RBM6P78332 1123 aaKnown RBP9.14□□□□□ -0.95
CACNA1A-203ENST00000573891 ZNF692Q9BU19 519 aaPredicted RBP9.14□□□□□ -0.95
CACNA1A-203ENST00000573891 VGFO15240 615 aaPredicted RBP9.13□□□□□ -0.95
CACNA1A-203ENST00000573891 ABCB7O75027 752 aa9.13□□□□□ -0.95
CACNA1A-203ENST00000573891 QTRT2Q9H974 415 aaKnown RBP9.13□□□□□ -0.95
CACNA1A-203ENST00000573891 SRCAPQ6ZRS2 3230 aa9.12□□□□□ -0.95
CACNA1A-203ENST00000573891 PPARGC1BQ86YN6 1023 aaKnown RBP9.12□□□□□ -0.95
CACNA1A-203ENST00000573891 NGLY1Q96IV0 654 aa9.12□□□□□ -0.95
CACNA1A-203ENST00000573891 ORAI2Q96SN7 254 aa9.12□□□□□ -0.95
CACNA1A-203ENST00000573891 HFM1A2PYH4 1435 aa9.12□□□□□ -0.95
CACNA1A-203ENST00000573891 RPGRIP1LQ68CZ1 1315 aa9.11□□□□□ -0.95
CACNA1A-203ENST00000573891 ADAMTS2O95450 1211 aa9.11□□□□□ -0.95
CACNA1A-203ENST00000573891 MIER1Q8N108 512 aa9.11□□□□□ -0.95
CACNA1A-203ENST00000573891 SSUH2Q9Y2M2 353 aa9.11□□□□□ -0.95
CACNA1A-203ENST00000573891 KIF1BO60333 1816 aa9.1□□□□□ -0.95
CACNA1A-203ENST00000573891 FNBP4Q8N3X1 1017 aaPredicted RBP9.1□□□□□ -0.95
CACNA1A-203ENST00000573891 MYOM2P54296 1465 aa9.09□□□□□ -0.95
CACNA1A-203ENST00000573891 CDC42BPGQ6DT37 1551 aa9.09□□□□□ -0.95
CACNA1A-203ENST00000573891 USP21Q9UK80 565 aa9.09□□□□□ -0.95
CACNA1A-203ENST00000573891 ATAD2Q6PL18 1390 aa9.09□□□□□ -0.95
CACNA1A-203ENST00000573891 COL22A1Q8NFW1 1626 aaPredicted RBP9.09□□□□□ -0.95
CACNA1A-203ENST00000573891 ATRNO75882 1429 aa9.08□□□□□ -0.96
CACNA1A-203ENST00000573891 SPDYE2BA6NHP3 402 aa9.08□□□□□ -0.96
CACNA1A-203ENST00000573891 SPDYE6P0CI01 402 aa9.08□□□□□ -0.96
CACNA1A-203ENST00000573891 SPDYE2Q495Y8 402 aa9.08□□□□□ -0.96
CACNA1A-203ENST00000573891 TRPC5Q9UL62 973 aaPredicted RBP9.08□□□□□ -0.96
CACNA1A-203ENST00000573891 PXDNQ92626 1479 aa9.08□□□□□ -0.96
CACNA1A-203ENST00000573891 NPHP3Q7Z494 1330 aa9.07□□□□□ -0.96
CACNA1A-203ENST00000573891 TECPR2O15040 1411 aa9.07□□□□□ -0.96
CACNA1A-203ENST00000573891 PPLO60437 1756 aa9.07□□□□□ -0.96
CACNA1A-203ENST00000573891 ESCO1Q5FWF5 840 aa9.06□□□□□ -0.96
CACNA1A-203ENST00000573891 BCL9LQ86UU0 1499 aa9.06□□□□□ -0.96
CACNA1A-203ENST00000573891 ADGRF5Q8IZF2 1346 aa9.05□□□□□ -0.96
CACNA1A-203ENST00000573891 SPATA31E1Q6ZUB1 1445 aa9.05□□□□□ -0.96
CACNA1A-203ENST00000573891 LRPPRCP42704 1394 aaKnown RBP9.05□□□□□ -0.96
CACNA1A-203ENST00000573891 ABCC11Q96J66 1382 aa9.05□□□□□ -0.96
CACNA1A-203ENST00000573891 CIZ1Q9ULV3 898 aaPredicted RBP9.05□□□□□ -0.96
CACNA1A-203ENST00000573891 ANKRD30BQ9BXX2 1392 aa9.04□□□□□ -0.96
CACNA1A-203ENST00000573891 FOXO3O43524 673 aa9.04□□□□□ -0.96
CACNA1A-203ENST00000573891 EP400Q96L91 3159 aa9.04□□□□□ -0.96
CACNA1A-203ENST00000573891 CCDC144AA2RUR9 1427 aa9.04□□□□□ -0.96
CACNA1A-203ENST00000573891 XPCQ01831 940 aaPredicted RBP9.03□□□□□ -0.96
CACNA1A-203ENST00000573891 WAPLQ7Z5K2 1190 aa9.03□□□□□ -0.96
CACNA1A-203ENST00000573891 PIK3C2GO75747 1445 aa9.03□□□□□ -0.96
CACNA1A-203ENST00000573891 PLEKHH1Q9ULM0 1364 aa9.02□□□□□ -0.97
CACNA1A-203ENST00000573891 SLIT2O94813 1529 aa9.02□□□□□ -0.97
CACNA1A-203ENST00000573891 HS6ST3Q8IZP7 471 aa9.02□□□□□ -0.97
CACNA1A-203ENST00000573891 GJD4Q96KN9 370 aaPredicted RBP9.02□□□□□ -0.97
CACNA1A-203ENST00000573891 SPATA31A3Q5VYP0 1347 aa9.02□□□□□ -0.97
CACNA1A-203ENST00000573891 NUTM2FA1L443 756 aa9.01□□□□□ -0.97
CACNA1A-203ENST00000573891 NBR1Q14596 966 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms