RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 CEP63Q96MT8 703 aa19.07■□□□□ 0.64
CACNA1A-202ENST00000573710 TICAM2Q86XR7 235 aa19.07■□□□□ 0.64
CACNA1A-202ENST00000573710 RALYLQ86SE5 291 aaKnown RBP19.07■□□□□ 0.64
CACNA1A-202ENST00000573710 ANKRD18AQ8IVF6 992 aa19.07■□□□□ 0.64
CACNA1A-202ENST00000573710 CA8P35219 290 aa19.07■□□□□ 0.64
CACNA1A-202ENST00000573710 NUTM2GQ5VZR2 741 aa19.07■□□□□ 0.64
CACNA1A-202ENST00000573710 G3BP1Q13283 466 aaKnown RBP eCLIP19.06■□□□□ 0.64
CACNA1A-202ENST00000573710 RUFY2Q8WXA3 655 aa19.06■□□□□ 0.64
CACNA1A-202ENST00000573710 SMC2O95347 1197 aa19.06■□□□□ 0.64
CACNA1A-202ENST00000573710 EZRP15311 586 aaKnown RBP19.05■□□□□ 0.64
CACNA1A-202ENST00000573710 PODXL2Q9NZ53 605 aa19.05■□□□□ 0.64
CACNA1A-202ENST00000573710 HSPA5P11021 654 aaKnown RBP19.05■□□□□ 0.64
CACNA1A-202ENST00000573710 CWC15Q9P013 229 aaKnown RBP19.05■□□□□ 0.64
CACNA1A-202ENST00000573710 PKD2Q13563 968 aa19.05■□□□□ 0.64
CACNA1A-202ENST00000573710 CEBPZQ03701 1054 aaKnown RBP19.04■□□□□ 0.64
CACNA1A-202ENST00000573710 LEKR1Q6ZMV7 388 aa19.04■□□□□ 0.64
CACNA1A-202ENST00000573710 RIC3Q7Z5B4 369 aa19.04■□□□□ 0.64
CACNA1A-202ENST00000573710 RSPH6AQ9H0K4 717 aa19.03■□□□□ 0.64
CACNA1A-202ENST00000573710 MAGEC2Q9UBF1 373 aaPredicted RBP19.03■□□□□ 0.64
CACNA1A-202ENST00000573710 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.03■□□□□ 0.64
CACNA1A-202ENST00000573710 ERLIN2O94905 339 aa19.02■□□□□ 0.64
CACNA1A-202ENST00000573710 GRIPAP1Q4V328 841 aa19.02■□□□□ 0.64
CACNA1A-202ENST00000573710 NUTM2BA6NNL0 878 aaPredicted RBP19.02■□□□□ 0.64
CACNA1A-202ENST00000573710 NUTM2EB1AL46 878 aaPredicted RBP19.02■□□□□ 0.64
CACNA1A-202ENST00000573710 NUTM2AQ8IVF1 878 aaPredicted RBP19.02■□□□□ 0.64
CACNA1A-202ENST00000573710 TANGO6Q9C0B7 1094 aa19.01■□□□□ 0.63
CACNA1A-202ENST00000573710 KIF3BO15066 747 aa19.01■□□□□ 0.63
CACNA1A-202ENST00000573710 FAM161AQ3B820 660 aa19.01■□□□□ 0.63
CACNA1A-202ENST00000573710 SPC24Q8NBT2 197 aa19.01■□□□□ 0.63
CACNA1A-202ENST00000573710 SMC3Q9UQE7 1217 aa19.01■□□□□ 0.63
CACNA1A-202ENST00000573710 WASHC2CQ9Y4E1 1318 aa19.01■□□□□ 0.63
CACNA1A-202ENST00000573710 KIAA0754O94854 1291 aa19.01■□□□□ 0.63
CACNA1A-202ENST00000573710 COG3Q96JB2 828 aa19.01■□□□□ 0.63
CACNA1A-202ENST00000573710 GIMAP7Q8NHV1 300 aa19■□□□□ 0.63
CACNA1A-202ENST00000573710 CCDC112Q8NEF3 446 aa19■□□□□ 0.63
CACNA1A-202ENST00000573710 CCDC181Q5TID7 509 aa19■□□□□ 0.63
CACNA1A-202ENST00000573710 RBM10P98175 930 aaKnown RBP19■□□□□ 0.63
CACNA1A-202ENST00000573710 CGNL1Q0VF96 1302 aa18.99■□□□□ 0.63
CACNA1A-202ENST00000573710 COMMD10Q9Y6G5 202 aa18.99■□□□□ 0.63
CACNA1A-202ENST00000573710 XBP1P17861 261 aa18.99■□□□□ 0.63
CACNA1A-202ENST00000573710 RNF20Q5VTR2 975 aa18.99■□□□□ 0.63
CACNA1A-202ENST00000573710 RALBP1Q15311 655 aa18.99■□□□□ 0.63
CACNA1A-202ENST00000573710 CCDC73Q6ZRK6 1079 aa18.99■□□□□ 0.63
CACNA1A-202ENST00000573710 PIBF1Q8WXW3 757 aa18.99■□□□□ 0.63
CACNA1A-202ENST00000573710 ANAPC15P60006 121 aa18.98■□□□□ 0.63
CACNA1A-202ENST00000573710 CCDC113Q9H0I3 377 aa18.98■□□□□ 0.63
CACNA1A-202ENST00000573710 ZSCAN29Q8IWY8 852 aaPredicted RBP18.98■□□□□ 0.63
CACNA1A-202ENST00000573710 DDX58O95786 925 aaKnown RBP18.98■□□□□ 0.63
CACNA1A-202ENST00000573710 FKBP5Q13451 457 aaPredicted RBP18.98■□□□□ 0.63
CACNA1A-202ENST00000573710 DEF6Q9H4E7 631 aa18.98■□□□□ 0.63
CACNA1A-202ENST00000573710 MPNDQ8N594 471 aa18.97■□□□□ 0.63
CACNA1A-202ENST00000573710 RNF214Q8ND24 703 aa18.97■□□□□ 0.63
CACNA1A-202ENST00000573710 LRRFIP2Q9Y608 721 aaKnown RBP18.97■□□□□ 0.63
CACNA1A-202ENST00000573710 SDF4Q9BRK5 362 aa18.96■□□□□ 0.63
CACNA1A-202ENST00000573710 RBM42Q9BTD8 480 aaKnown RBP18.96■□□□□ 0.63
CACNA1A-202ENST00000573710 ERICH4A6NGS2 130 aa18.96■□□□□ 0.63
CACNA1A-202ENST00000573710 STRN4Q9NRL3 753 aa18.95■□□□□ 0.62
CACNA1A-202ENST00000573710 IPO9Q96P70 1041 aaKnown RBP18.95■□□□□ 0.62
CACNA1A-202ENST00000573710 SCLT1Q96NL6 688 aa18.95■□□□□ 0.62
CACNA1A-202ENST00000573710 SMC1AQ14683 1233 aaKnown RBP18.94■□□□□ 0.62
CACNA1A-202ENST00000573710 GRM1Q13255 1194 aa18.94■□□□□ 0.62
CACNA1A-202ENST00000573710 UBE4AQ14139 1066 aa18.94■□□□□ 0.62
CACNA1A-202ENST00000573710 INCENPQ9NQS7 918 aa18.94■□□□□ 0.62
CACNA1A-202ENST00000573710 CFAP45Q9UL16 551 aa18.94■□□□□ 0.62
CACNA1A-202ENST00000573710 EIF3AQ14152 1382 aaKnown RBP18.93■□□□□ 0.62
CACNA1A-202ENST00000573710 GOLGA6L7A0A1B0GV03 622 aa18.93■□□□□ 0.62
CACNA1A-202ENST00000573710 TMCO5BA8MYB1 307 aa18.93■□□□□ 0.62
CACNA1A-202ENST00000573710 CEP162Q5TB80 1403 aa18.93■□□□□ 0.62
CACNA1A-202ENST00000573710 CHMP5Q9NZZ3 219 aa18.93■□□□□ 0.62
CACNA1A-202ENST00000573710 SSBP05455 408 aaKnown RBP eCLIP18.93■□□□□ 0.62
CACNA1A-202ENST00000573710 PIP4K2BP78356 416 aa18.93■□□□□ 0.62
CACNA1A-202ENST00000573710 ERCC4Q92889 916 aaPredicted RBP18.93■□□□□ 0.62
CACNA1A-202ENST00000573710 ATF3P18847 181 aa18.92■□□□□ 0.62
CACNA1A-202ENST00000573710 SOGA3Q5TF21 947 aa18.92■□□□□ 0.62
CACNA1A-202ENST00000573710 MINK1Q8N4C8 1332 aaPredicted RBP18.92■□□□□ 0.62
CACNA1A-202ENST00000573710 ZWINTO95229 277 aa18.91■□□□□ 0.62
CACNA1A-202ENST00000573710 TTLL12Q14166 644 aaPredicted RBP18.91■□□□□ 0.62
CACNA1A-202ENST00000573710 SPINK5Q9NQ38 1064 aaPredicted RBP18.91■□□□□ 0.62
CACNA1A-202ENST00000573710 TMCO4Q5TGY1 634 aa18.9■□□□□ 0.62
CACNA1A-202ENST00000573710 GOLGA3Q08378 1498 aa18.9■□□□□ 0.62
CACNA1A-202ENST00000573710 SMARCE1Q969G3 411 aa18.9■□□□□ 0.62
CACNA1A-202ENST00000573710 TXLNAP40222 546 aa18.9■□□□□ 0.62
CACNA1A-202ENST00000573710 MYO15BQ96JP2 1530 aa18.9■□□□□ 0.62
CACNA1A-202ENST00000573710 NAT10Q9H0A0 1025 aaKnown RBP18.89■□□□□ 0.61
CACNA1A-202ENST00000573710 KIF6Q6ZMV9 814 aa18.89■□□□□ 0.61
CACNA1A-202ENST00000573710 MAP2K1Q02750 393 aaPredicted RBP18.88■□□□□ 0.61
CACNA1A-202ENST00000573710 TRIM5Q9C035 493 aa18.88■□□□□ 0.61
CACNA1A-202ENST00000573710 NLRP2Q9NX02 1062 aa18.88■□□□□ 0.61
CACNA1A-202ENST00000573710 COG6Q9Y2V7 657 aa18.88■□□□□ 0.61
CACNA1A-202ENST00000573710 DRC1Q96MC2 740 aa18.88■□□□□ 0.61
CACNA1A-202ENST00000573710 SRRTQ9BXP5 876 aaKnown RBP18.88■□□□□ 0.61
CACNA1A-202ENST00000573710 ECM2O94769 699 aaPredicted RBP18.88■□□□□ 0.61
CACNA1A-202ENST00000573710 NFKBIBQ15653 356 aa18.88■□□□□ 0.61
CACNA1A-202ENST00000573710 ZNF76P36508 570 aa18.87■□□□□ 0.61
CACNA1A-202ENST00000573710 FILIP1LQ4L180 1135 aa18.87■□□□□ 0.61
CACNA1A-202ENST00000573710 GOPCQ9HD26 462 aa18.87■□□□□ 0.61
CACNA1A-202ENST00000573710 SLC3A2P08195 630 aaKnown RBP18.87■□□□□ 0.61
CACNA1A-202ENST00000573710 SART3Q15020 963 aaKnown RBP18.87■□□□□ 0.61
CACNA1A-202ENST00000573710 CNNM1Q9NRU3 951 aa18.87■□□□□ 0.61
CACNA1A-202ENST00000573710 HMOX1P09601 288 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms