RNA–Protein interactions for RNA: ENST00000573681.1

PRPF8-207, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-207ENST00000573681 MINK1Q8N4C8 1332 aaPredicted RBP17.47■□□□□ 0.39
PRPF8-207ENST00000573681 BRD4O60885 1362 aaPredicted RBP17.46■□□□□ 0.39
PRPF8-207ENST00000573681 ATAD2Q6PL18 1390 aa17.46■□□□□ 0.39
PRPF8-207ENST00000573681 CC2D1BQ5T0F9 858 aaKnown RBP17.46■□□□□ 0.39
PRPF8-207ENST00000573681 WAPLQ7Z5K2 1190 aa17.46■□□□□ 0.39
PRPF8-207ENST00000573681 NLRP13Q86W25 1043 aa17.46■□□□□ 0.39
PRPF8-207ENST00000573681 CDK19Q9BWU1 502 aa17.46■□□□□ 0.39
PRPF8-207ENST00000573681 SLC12A5Q9H2X9 1139 aa17.46■□□□□ 0.39
PRPF8-207ENST00000573681 CABP2Q9NPB3 220 aa17.46■□□□□ 0.39
PRPF8-207ENST00000573681 ARHGEF28Q8N1W1 1705 aaKnown RBP17.46■□□□□ 0.39
PRPF8-207ENST00000573681 SLC26A8Q96RN1 970 aa17.45■□□□□ 0.38
PRPF8-207ENST00000573681 NRXN3Q9Y4C0 1643 aa17.45■□□□□ 0.38
PRPF8-207ENST00000573681 CEP170BQ9Y4F5 1589 aaPredicted RBP17.45■□□□□ 0.38
PRPF8-207ENST00000573681 CARD14Q9BXL6 1004 aa17.44■□□□□ 0.38
PRPF8-207ENST00000573681 PIK3R4Q99570 1358 aa17.42■□□□□ 0.38
PRPF8-207ENST00000573681 SETD1AO15047 1707 aaKnown RBP17.42■□□□□ 0.38
PRPF8-207ENST00000573681 TERF2IPQ9NYB0 399 aa17.42■□□□□ 0.38
PRPF8-207ENST00000573681 AMOTL2Q9Y2J4 779 aa17.42■□□□□ 0.38
PRPF8-207ENST00000573681 TULP4Q9NRJ4 1543 aa17.42■□□□□ 0.38
PRPF8-207ENST00000573681 WASLO00401 505 aaPredicted RBP17.41■□□□□ 0.38
PRPF8-207ENST00000573681 FAM9BQ8IZU0 186 aa17.41■□□□□ 0.38
PRPF8-207ENST00000573681 PNISRQ8TF01 805 aaKnown RBP17.41■□□□□ 0.38
PRPF8-207ENST00000573681 PLEKHH1Q9ULM0 1364 aa17.4■□□□□ 0.38
PRPF8-207ENST00000573681 SETD1BQ9UPS6 1966 aaKnown RBP17.4■□□□□ 0.38
PRPF8-207ENST00000573681 ANKRD36BQ8N2N9 1353 aa17.4■□□□□ 0.38
PRPF8-207ENST00000573681 DIP2AQ14689 1571 aa17.38■□□□□ 0.37
PRPF8-207ENST00000573681 AEBP2Q6ZN18 517 aaPredicted RBP17.38■□□□□ 0.37
PRPF8-207ENST00000573681 HDGFL2Q7Z4V5 671 aaPredicted RBP17.38■□□□□ 0.37
PRPF8-207ENST00000573681 PPP2R1AP30153 589 aa17.37■□□□□ 0.37
PRPF8-207ENST00000573681 CGNL1Q0VF96 1302 aa17.37■□□□□ 0.37
PRPF8-207ENST00000573681 ROBO2Q9HCK4 1378 aa17.37■□□□□ 0.37
PRPF8-207ENST00000573681 MYOM1P52179 1685 aa17.36■□□□□ 0.37
PRPF8-207ENST00000573681 CPS1P31327 1500 aa17.36■□□□□ 0.37
PRPF8-207ENST00000573681 CABP1Q9NZU7 370 aa17.35■□□□□ 0.37
PRPF8-207ENST00000573681 PTPRUQ92729 1446 aa17.35■□□□□ 0.37
PRPF8-207ENST00000573681 KNDC1Q76NI1 1749 aa17.35■□□□□ 0.37
PRPF8-207ENST00000573681 ZNF142P52746 1687 aaPredicted RBP17.34■□□□□ 0.37
PRPF8-207ENST00000573681 HNRNPUQ00839 825 aaKnown RBP eCLIP17.34■□□□□ 0.37
PRPF8-207ENST00000573681 NUDT16Q96DE0 195 aaKnown RBP17.34■□□□□ 0.37
PRPF8-207ENST00000573681 CCDC61Q9Y6R9 512 aa17.34■□□□□ 0.37
PRPF8-207ENST00000573681 NSD3Q9BZ95 1437 aa17.33■□□□□ 0.36
PRPF8-207ENST00000573681 NSD2O96028 1365 aa17.33■□□□□ 0.36
PRPF8-207ENST00000573681 MORC1Q86VD1 984 aa17.33■□□□□ 0.36
PRPF8-207ENST00000573681 PTCH1Q13635 1447 aa17.31■□□□□ 0.36
PRPF8-207ENST00000573681 ZNF692Q9BU19 519 aaPredicted RBP17.31■□□□□ 0.36
PRPF8-207ENST00000573681 INSRP06213 1382 aa17.3■□□□□ 0.36
PRPF8-207ENST00000573681 NPHP4O75161 1426 aaPredicted RBP17.3■□□□□ 0.36
PRPF8-207ENST00000573681 A0A1W2PP64 1363 aa17.29■□□□□ 0.36
PRPF8-207ENST00000573681 KCNA6P17658 529 aa17.28■□□□□ 0.36
PRPF8-207ENST00000573681 ATP7BP35670 1465 aa17.27■□□□□ 0.36
PRPF8-207ENST00000573681 PLEKHG3A1L390 1219 aa17.27■□□□□ 0.36
PRPF8-207ENST00000573681 NCKAP5LQ9HCH0 1330 aa17.26■□□□□ 0.35
PRPF8-207ENST00000573681 USP32Q8NFA0 1604 aa17.25■□□□□ 0.35
PRPF8-207ENST00000573681 PPIP5K1Q6PFW1 1433 aa17.25■□□□□ 0.35
PRPF8-207ENST00000573681 KDM4FA0A1W2PPD8 638 aa17.25■□□□□ 0.35
PRPF8-207ENST00000573681 FYB1O15117 783 aa17.25■□□□□ 0.35
PRPF8-207ENST00000573681 CD163L1Q9NR16 1453 aa17.24■□□□□ 0.35
PRPF8-207ENST00000573681 ZBED9Q6R2W3 1325 aa17.24■□□□□ 0.35
PRPF8-207ENST00000573681 ADGRB2O60241 1585 aa17.23■□□□□ 0.35
PRPF8-207ENST00000573681 CPSF1Q10570 1443 aaKnown RBP17.23■□□□□ 0.35
PRPF8-207ENST00000573681 WDR43Q15061 677 aaKnown RBP eCLIP17.23■□□□□ 0.35
PRPF8-207ENST00000573681 PRR36Q9H6K5 1346 aa17.22■□□□□ 0.35
PRPF8-207ENST00000573681 POLR3AO14802 1390 aaPredicted RBP17.21■□□□□ 0.35
PRPF8-207ENST00000573681 CFAP53Q96M91 514 aa17.21■□□□□ 0.35
PRPF8-207ENST00000573681 GGNBP2Q9H3C7 697 aa17.2■□□□□ 0.34
PRPF8-207ENST00000573681 ADAMTS8Q9UP79 889 aa17.2■□□□□ 0.34
PRPF8-207ENST00000573681 XRN1Q8IZH2 1706 aaKnown RBP17.2■□□□□ 0.34
PRPF8-207ENST00000573681 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.2■□□□□ 0.34
PRPF8-207ENST00000573681 EDC4Q6P2E9 1401 aaKnown RBP17.2■□□□□ 0.34
PRPF8-207ENST00000573681 TNNT2P45379 298 aaPredicted RBP17.18■□□□□ 0.34
PRPF8-207ENST00000573681 MTHFSP49914 203 aa17.18■□□□□ 0.34
PRPF8-207ENST00000573681 ACEP12821 1306 aa17.18■□□□□ 0.34
PRPF8-207ENST00000573681 ANKARQ7Z5J8 1434 aa17.17■□□□□ 0.34
PRPF8-207ENST00000573681 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.17■□□□□ 0.34
PRPF8-207ENST00000573681 GTF3C3Q9Y5Q9 886 aa17.17■□□□□ 0.34
PRPF8-207ENST00000573681 SCAF1Q9H7N4 1312 aaKnown RBP17.17■□□□□ 0.34
PRPF8-207ENST00000573681 PROSER2Q86WR7 435 aaPredicted RBP17.15■□□□□ 0.34
PRPF8-207ENST00000573681 CDC42BPGQ6DT37 1551 aa17.15■□□□□ 0.34
PRPF8-207ENST00000573681 CHD2O14647 1828 aaKnown RBP17.14■□□□□ 0.34
PRPF8-207ENST00000573681 NUTM2FA1L443 756 aa17.14■□□□□ 0.33
PRPF8-207ENST00000573681 PDE3BQ13370 1112 aa17.14■□□□□ 0.33
PRPF8-207ENST00000573681 NGDNQ8NEJ9 315 aaKnown RBP17.14■□□□□ 0.33
PRPF8-207ENST00000573681 COG3Q96JB2 828 aa17.14■□□□□ 0.33
PRPF8-207ENST00000573681 NGEFQ8N5V2 710 aa17.13■□□□□ 0.33
PRPF8-207ENST00000573681 TTC21BQ7Z4L5 1316 aa17.13■□□□□ 0.33
PRPF8-207ENST00000573681 NUDCQ9Y266 331 aa17.12■□□□□ 0.33
PRPF8-207ENST00000573681 BLMP54132 1417 aaPredicted RBP17.12■□□□□ 0.33
PRPF8-207ENST00000573681 HSPA2P54652 639 aa17.11■□□□□ 0.33
PRPF8-207ENST00000573681 C14orf37Q86TY3 774 aa17.11■□□□□ 0.33
PRPF8-207ENST00000573681 NME9Q86XW9 330 aa17.11■□□□□ 0.33
PRPF8-207ENST00000573681 TTC21AQ8NDW8 1320 aa17.11■□□□□ 0.33
PRPF8-207ENST00000573681 ADGRL3Q9HAR2 1447 aa17.1■□□□□ 0.33
PRPF8-207ENST00000573681 PMFBP1Q8TBY8 1022 aa17.09■□□□□ 0.33
PRPF8-207ENST00000573681 C19orf44Q9H6X5 657 aa17.09■□□□□ 0.33
PRPF8-207ENST00000573681 PHF8Q9UPP1 1060 aa17.09■□□□□ 0.33
PRPF8-207ENST00000573681 NCOA3Q9Y6Q9 1424 aa17.09■□□□□ 0.33
PRPF8-207ENST00000573681 USP6P35125 1406 aa17.08■□□□□ 0.32
PRPF8-207ENST00000573681 AATKQ6ZMQ8 1374 aa17.08■□□□□ 0.32
PRPF8-207ENST00000573681 NWD1Q149M9 1564 aa17.07■□□□□ 0.32
PRPF8-207ENST00000573681 SSH2Q76I76 1423 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms