RNA–Protein interactions for RNA: ENST00000572438.1

CHRNE-202, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

TSL 5

Gene CHRNE, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-202ENST00000572438 MINK1Q8N4C8 1332 aaPredicted RBP27.92■■■□□ 2.06
CHRNE-202ENST00000572438 TECPR2O15040 1411 aa27.92■■■□□ 2.06
CHRNE-202ENST00000572438 FAM9BQ8IZU0 186 aa27.9■■■□□ 2.06
CHRNE-202ENST00000572438 TMC1Q8TDI8 760 aa27.9■■■□□ 2.06
CHRNE-202ENST00000572438 SIRT1Q96EB6 747 aa27.9■■■□□ 2.06
CHRNE-202ENST00000572438 MED14O60244 1454 aa27.89■■■□□ 2.06
CHRNE-202ENST00000572438 KNDC1Q76NI1 1749 aa27.89■■■□□ 2.06
CHRNE-202ENST00000572438 NLRP13Q86W25 1043 aa27.89■■■□□ 2.06
CHRNE-202ENST00000572438 CABP2Q9NPB3 220 aa27.89■■■□□ 2.06
CHRNE-202ENST00000572438 CARD14Q9BXL6 1004 aa27.88■■■□□ 2.05
CHRNE-202ENST00000572438 SLC12A5Q9H2X9 1139 aa27.88■■■□□ 2.05
CHRNE-202ENST00000572438 WAPLQ7Z5K2 1190 aa27.88■■■□□ 2.05
CHRNE-202ENST00000572438 FAM135BQ49AJ0 1406 aa27.87■■■□□ 2.05
CHRNE-202ENST00000572438 PLEKHH1Q9ULM0 1364 aa27.87■■■□□ 2.05
CHRNE-202ENST00000572438 SRPK2P78362 688 aaKnown RBP27.86■■■□□ 2.05
CHRNE-202ENST00000572438 CPS1P31327 1500 aa27.86■■■□□ 2.05
CHRNE-202ENST00000572438 ATAD2Q6PL18 1390 aa27.85■■■□□ 2.05
CHRNE-202ENST00000572438 NINLQ9Y2I6 1382 aa27.85■■■□□ 2.05
CHRNE-202ENST00000572438 ZNF142P52746 1687 aaPredicted RBP27.84■■■□□ 2.05
CHRNE-202ENST00000572438 HNRNPUQ00839 825 aaKnown RBP eCLIP27.83■■■□□ 2.05
CHRNE-202ENST00000572438 PNISRQ8TF01 805 aaKnown RBP27.83■■■□□ 2.05
CHRNE-202ENST00000572438 TBX22Q9Y458 520 aa27.82■■■□□ 2.04
CHRNE-202ENST00000572438 SLC26A8Q96RN1 970 aa27.81■■■□□ 2.04
CHRNE-202ENST00000572438 CDK19Q9BWU1 502 aa27.81■■■□□ 2.04
CHRNE-202ENST00000572438 ANKRD36BQ8N2N9 1353 aa27.8■■■□□ 2.04
CHRNE-202ENST00000572438 DIP2AQ14689 1571 aa27.8■■■□□ 2.04
CHRNE-202ENST00000572438 NSD3Q9BZ95 1437 aa27.8■■■□□ 2.04
CHRNE-202ENST00000572438 SETD1BQ9UPS6 1966 aaKnown RBP27.77■■■□□ 2.04
CHRNE-202ENST00000572438 ROBO2Q9HCK4 1378 aa27.77■■■□□ 2.04
CHRNE-202ENST00000572438 PTPRUQ92729 1446 aa27.75■■■□□ 2.03
CHRNE-202ENST00000572438 PPP2R1AP30153 589 aa27.75■■■□□ 2.03
CHRNE-202ENST00000572438 USP32Q8NFA0 1604 aa27.75■■■□□ 2.03
CHRNE-202ENST00000572438 ANKLE2Q86XL3 938 aa27.74■■■□□ 2.03
CHRNE-202ENST00000572438 WASLO00401 505 aaPredicted RBP27.73■■■□□ 2.03
CHRNE-202ENST00000572438 SCAF1Q9H7N4 1312 aaKnown RBP27.72■■■□□ 2.03
CHRNE-202ENST00000572438 A0A1W2PP64 1363 aa27.71■■■□□ 2.03
CHRNE-202ENST00000572438 CGNL1Q0VF96 1302 aa27.7■■■□□ 2.03
CHRNE-202ENST00000572438 TERF2IPQ9NYB0 399 aa27.7■■■□□ 2.02
CHRNE-202ENST00000572438 AMOTL2Q9Y2J4 779 aa27.7■■■□□ 2.02
CHRNE-202ENST00000572438 PTCH1Q13635 1447 aa27.69■■■□□ 2.02
CHRNE-202ENST00000572438 CD163L1Q9NR16 1453 aa27.68■■■□□ 2.02
CHRNE-202ENST00000572438 PIK3R4Q99570 1358 aa27.68■■■□□ 2.02
CHRNE-202ENST00000572438 GTF3C3Q9Y5Q9 886 aa27.67■■■□□ 2.02
CHRNE-202ENST00000572438 CABP1Q9NZU7 370 aa27.67■■■□□ 2.02
CHRNE-202ENST00000572438 NSD2O96028 1365 aa27.66■■■□□ 2.02
CHRNE-202ENST00000572438 ADGRB2O60241 1585 aa27.66■■■□□ 2.02
CHRNE-202ENST00000572438 ZBED9Q6R2W3 1325 aa27.65■■■□□ 2.02
CHRNE-202ENST00000572438 HDGFL2Q7Z4V5 671 aaPredicted RBP27.64■■■□□ 2.02
CHRNE-202ENST00000572438 ATP7BP35670 1465 aa27.63■■■□□ 2.01
CHRNE-202ENST00000572438 XRN1Q8IZH2 1706 aaKnown RBP27.63■■■□□ 2.01
CHRNE-202ENST00000572438 MORC1Q86VD1 984 aa27.63■■■□□ 2.01
CHRNE-202ENST00000572438 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.63■■■□□ 2.01
CHRNE-202ENST00000572438 INSRP06213 1382 aa27.6■■■□□ 2.01
CHRNE-202ENST00000572438 NUDT16Q96DE0 195 aaKnown RBP27.6■■■□□ 2.01
CHRNE-202ENST00000572438 PPIP5K1Q6PFW1 1433 aa27.59■■■□□ 2.01
CHRNE-202ENST00000572438 CCDC61Q9Y6R9 512 aa27.57■■■□□ 2
CHRNE-202ENST00000572438 NPHP4O75161 1426 aaPredicted RBP27.56■■■□□ 2
CHRNE-202ENST00000572438 KCNA6P17658 529 aa27.55■■■□□ 2
CHRNE-202ENST00000572438 PRR36Q9H6K5 1346 aa27.54■■■□□ 2
CHRNE-202ENST00000572438 CPSF1Q10570 1443 aaKnown RBP27.54■■■□□ 2
CHRNE-202ENST00000572438 CDC42BPGQ6DT37 1551 aa27.52■■■□□ 2
CHRNE-202ENST00000572438 BLMP54132 1417 aaPredicted RBP27.52■■■□□ 2
CHRNE-202ENST00000572438 LMTK3Q96Q04 1460 aa27.51■■■□□ 2
CHRNE-202ENST00000572438 FYB1O15117 783 aa27.51■■□□□ 1.99
CHRNE-202ENST00000572438 POLR3AO14802 1390 aaPredicted RBP27.51■■□□□ 1.99
CHRNE-202ENST00000572438 TNNT2P45379 298 aaPredicted RBP27.51■■□□□ 1.99
CHRNE-202ENST00000572438 WDR43Q15061 677 aaKnown RBP eCLIP27.51■■□□□ 1.99
CHRNE-202ENST00000572438 NCKAP5LQ9HCH0 1330 aa27.5■■□□□ 1.99
CHRNE-202ENST00000572438 GGNBP2Q9H3C7 697 aa27.49■■□□□ 1.99
CHRNE-202ENST00000572438 CHD2O14647 1828 aaKnown RBP27.48■■□□□ 1.99
CHRNE-202ENST00000572438 EDC4Q6P2E9 1401 aaKnown RBP27.48■■□□□ 1.99
CHRNE-202ENST00000572438 ADAMTS8Q9UP79 889 aa27.48■■□□□ 1.99
CHRNE-202ENST00000572438 TOPAZ1Q8N9V7 1692 aa27.47■■□□□ 1.99
CHRNE-202ENST00000572438 ANKRD26Q9UPS8 1709 aa27.46■■□□□ 1.99
CHRNE-202ENST00000572438 PLEKHG3A1L390 1219 aa27.44■■□□□ 1.98
CHRNE-202ENST00000572438 AEBP2Q6ZN18 517 aaPredicted RBP27.44■■□□□ 1.98
CHRNE-202ENST00000572438 ZNF692Q9BU19 519 aaPredicted RBP27.44■■□□□ 1.98
CHRNE-202ENST00000572438 KIF20BQ96Q89 1820 aa27.44■■□□□ 1.98
CHRNE-202ENST00000572438 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.43■■□□□ 1.98
CHRNE-202ENST00000572438 MTHFSP49914 203 aa27.42■■□□□ 1.98
CHRNE-202ENST00000572438 HSPA2P54652 639 aa27.42■■□□□ 1.98
CHRNE-202ENST00000572438 MON2Q7Z3U7 1717 aa27.42■■□□□ 1.98
CHRNE-202ENST00000572438 AKAP12Q02952 1782 aa27.41■■□□□ 1.98
CHRNE-202ENST00000572438 ITSN1Q15811 1721 aa27.41■■□□□ 1.98
CHRNE-202ENST00000572438 NUTM2FA1L443 756 aa27.41■■□□□ 1.98
CHRNE-202ENST00000572438 SENP3-EIF4A1A0A087X0R7 540 aa27.4■■□□□ 1.98
CHRNE-202ENST00000572438 CFAP53Q96M91 514 aa27.39■■□□□ 1.98
CHRNE-202ENST00000572438 ANKARQ7Z5J8 1434 aa27.39■■□□□ 1.97
CHRNE-202ENST00000572438 NKTRP30414 1462 aaKnown RBP27.38■■□□□ 1.97
CHRNE-202ENST00000572438 ACEP12821 1306 aa27.37■■□□□ 1.97
CHRNE-202ENST00000572438 NWD1Q149M9 1564 aa27.36■■□□□ 1.97
CHRNE-202ENST00000572438 SMG6Q86US8 1419 aaKnown RBP27.35■■□□□ 1.97
CHRNE-202ENST00000572438 NME9Q86XW9 330 aa27.34■■□□□ 1.97
CHRNE-202ENST00000572438 FMN2Q9NZ56 1722 aa27.34■■□□□ 1.97
CHRNE-202ENST00000572438 SHPRHQ149N8 1683 aa27.33■■□□□ 1.97
CHRNE-202ENST00000572438 NALCNQ8IZF0 1738 aa27.33■■□□□ 1.97
CHRNE-202ENST00000572438 USP6P35125 1406 aa27.32■■□□□ 1.96
CHRNE-202ENST00000572438 NRKQ7Z2Y5 1582 aa27.32■■□□□ 1.96
CHRNE-202ENST00000572438 ADGRL3Q9HAR2 1447 aa27.32■■□□□ 1.96
CHRNE-202ENST00000572438 NUDCQ9Y266 331 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms