RNA–Protein interactions for RNA: ENST00000570606.5

SMG6-204, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-204ENST00000570606 RBM33Q96EV2 1170 aaKnown RBP9.96□□□□□ -0.82
SMG6-204ENST00000570606 ROCK1Q13464 1354 aa9.96□□□□□ -0.82
SMG6-204ENST00000570606 SPHKAPQ2M3C7 1700 aa9.95□□□□□ -0.82
SMG6-204ENST00000570606 HDGFP51858 240 aaKnown RBP9.94□□□□□ -0.82
SMG6-204ENST00000570606 KDM2AQ9Y2K7 1162 aa9.94□□□□□ -0.82
SMG6-204ENST00000570606 TRPM2O94759 1503 aa9.93□□□□□ -0.82
SMG6-204ENST00000570606 ITGAEP38570 1179 aa9.93□□□□□ -0.82
SMG6-204ENST00000570606 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.93□□□□□ -0.82
SMG6-204ENST00000570606 NUP155O75694 1391 aa9.92□□□□□ -0.82
SMG6-204ENST00000570606 CHADLQ6NUI6 762 aa9.92□□□□□ -0.82
SMG6-204ENST00000570606 C14orf37Q86TY3 774 aa9.92□□□□□ -0.82
SMG6-204ENST00000570606 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.91□□□□□ -0.82
SMG6-204ENST00000570606 NUTM2DQ5VT03 806 aaPredicted RBP9.91□□□□□ -0.82
SMG6-204ENST00000570606 TAOK2Q9UL54 1235 aa9.91□□□□□ -0.82
SMG6-204ENST00000570606 ADAMTS13Q76LX8 1427 aa9.9□□□□□ -0.82
SMG6-204ENST00000570606 COL16A1Q07092 1604 aaPredicted RBP9.9□□□□□ -0.82
SMG6-204ENST00000570606 NCOA3Q9Y6Q9 1424 aa9.9□□□□□ -0.83
SMG6-204ENST00000570606 PIK3R4Q99570 1358 aa9.89□□□□□ -0.83
SMG6-204ENST00000570606 VGFO15240 615 aaPredicted RBP9.89□□□□□ -0.83
SMG6-204ENST00000570606 NKX1-1Q15270 411 aaPredicted RBP9.89□□□□□ -0.83
SMG6-204ENST00000570606 SLAIN2Q9P270 581 aa9.89□□□□□ -0.83
SMG6-204ENST00000570606 TBX22Q9Y458 520 aa9.89□□□□□ -0.83
SMG6-204ENST00000570606 SETD1AO15047 1707 aaKnown RBP9.89□□□□□ -0.83
SMG6-204ENST00000570606 NRXN3Q9Y4C0 1643 aa9.89□□□□□ -0.83
SMG6-204ENST00000570606 KIF1BO60333 1816 aa9.89□□□□□ -0.83
SMG6-204ENST00000570606 JCADQ9P266 1359 aa9.88□□□□□ -0.83
SMG6-204ENST00000570606 SETBP1Q9Y6X0 1596 aa9.88□□□□□ -0.83
SMG6-204ENST00000570606 XRN1Q8IZH2 1706 aaKnown RBP9.88□□□□□ -0.83
SMG6-204ENST00000570606 PPARGC1BQ86YN6 1023 aaKnown RBP9.88□□□□□ -0.83
SMG6-204ENST00000570606 TSHZ2Q9NRE2 1034 aa9.88□□□□□ -0.83
SMG6-204ENST00000570606 RGS17Q9UGC6 210 aaPredicted RBP9.88□□□□□ -0.83
SMG6-204ENST00000570606 CLTCL1P53675 1640 aa9.88□□□□□ -0.83
SMG6-204ENST00000570606 AHDC1Q5TGY3 1603 aaPredicted RBP9.88□□□□□ -0.83
SMG6-204ENST00000570606 SHPRHQ149N8 1683 aa9.87□□□□□ -0.83
SMG6-204ENST00000570606 PYGBP11216 843 aa9.87□□□□□ -0.83
SMG6-204ENST00000570606 SGIP1Q9BQI5 828 aa9.87□□□□□ -0.83
SMG6-204ENST00000570606 ATF3P18847 181 aa9.86□□□□□ -0.83
SMG6-204ENST00000570606 ZNF326Q5BKZ1 582 aaKnown RBP9.86□□□□□ -0.83
SMG6-204ENST00000570606 CADPS2Q86UW7 1296 aa9.86□□□□□ -0.83
SMG6-204ENST00000570606 FARP1Q9Y4F1 1045 aaPredicted RBP9.86□□□□□ -0.83
SMG6-204ENST00000570606 PTPRUQ92729 1446 aa9.85□□□□□ -0.83
SMG6-204ENST00000570606 STK25O00506 426 aa9.85□□□□□ -0.83
SMG6-204ENST00000570606 MEX3CQ5U5Q3 659 aaKnown RBP9.85□□□□□ -0.83
SMG6-204ENST00000570606 POTEAQ6S8J7 498 aa9.85□□□□□ -0.83
SMG6-204ENST00000570606 NEXMIFQ5QGS0 1516 aa9.85□□□□□ -0.83
SMG6-204ENST00000570606 DCCP43146 1447 aa9.84□□□□□ -0.83
SMG6-204ENST00000570606 C19orf44Q9H6X5 657 aa9.84□□□□□ -0.83
SMG6-204ENST00000570606 AMOTL2Q9Y2J4 779 aa9.84□□□□□ -0.83
SMG6-204ENST00000570606 LRP6O75581 1613 aa9.84□□□□□ -0.83
SMG6-204ENST00000570606 NALCNQ8IZF0 1738 aa9.84□□□□□ -0.83
SMG6-204ENST00000570606 RRBP1Q9P2E9 1410 aaKnown RBP9.83□□□□□ -0.84
SMG6-204ENST00000570606 ASXL1Q8IXJ9 1541 aa9.83□□□□□ -0.84
SMG6-204ENST00000570606 NHSL1Q5SYE7 1610 aa9.83□□□□□ -0.84
SMG6-204ENST00000570606 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.83□□□□□ -0.84
SMG6-204ENST00000570606 FXR2P51116 673 aaKnown RBP eCLIP9.83□□□□□ -0.84
SMG6-204ENST00000570606 ZFP91Q96JP5 570 aaPredicted RBP9.83□□□□□ -0.84
SMG6-204ENST00000570606 SPATA31A6Q5VVP1 1343 aa9.82□□□□□ -0.84
SMG6-204ENST00000570606 PRKAR2AP13861 404 aaKnown RBP9.82□□□□□ -0.84
SMG6-204ENST00000570606 NAIPQ13075 1403 aa9.82□□□□□ -0.84
SMG6-204ENST00000570606 GTPBP6O43824 516 aaPredicted RBP9.81□□□□□ -0.84
SMG6-204ENST00000570606 TSPYL2Q9H2G4 693 aaPredicted RBP9.81□□□□□ -0.84
SMG6-204ENST00000570606 MST1RQ04912 1400 aa9.81□□□□□ -0.84
SMG6-204ENST00000570606 ADGRL3Q9HAR2 1447 aa9.81□□□□□ -0.84
SMG6-204ENST00000570606 METP08581 1390 aa9.8□□□□□ -0.84
SMG6-204ENST00000570606 BRINP3Q76B58 766 aa9.8□□□□□ -0.84
SMG6-204ENST00000570606 BCL11BQ9C0K0 894 aaPredicted RBP9.8□□□□□ -0.84
SMG6-204ENST00000570606 PPLO60437 1756 aa9.8□□□□□ -0.84
SMG6-204ENST00000570606 HFM1A2PYH4 1435 aa9.79□□□□□ -0.84
SMG6-204ENST00000570606 ZNF772Q68DY9 489 aaPredicted RBP9.78□□□□□ -0.84
SMG6-204ENST00000570606 TRIM52Q96A61 297 aa9.78□□□□□ -0.84
SMG6-204ENST00000570606 STK24Q9Y6E0 443 aa9.78□□□□□ -0.84
SMG6-204ENST00000570606 PTCH1Q13635 1447 aa9.78□□□□□ -0.84
SMG6-204ENST00000570606 SETD5Q9C0A6 1442 aa9.77□□□□□ -0.85
SMG6-204ENST00000570606 NUTM2BA6NNL0 878 aaPredicted RBP9.77□□□□□ -0.85
SMG6-204ENST00000570606 NUTM2EB1AL46 878 aaPredicted RBP9.77□□□□□ -0.85
SMG6-204ENST00000570606 NUTM2AQ8IVF1 878 aaPredicted RBP9.77□□□□□ -0.85
SMG6-204ENST00000570606 CCDC61Q9Y6R9 512 aa9.77□□□□□ -0.85
SMG6-204ENST00000570606 C1orf167Q5SNV9 1468 aa9.75□□□□□ -0.85
SMG6-204ENST00000570606 ZNF467Q7Z7K2 595 aaPredicted RBP9.75□□□□□ -0.85
SMG6-204ENST00000570606 CHRDL2Q6WN34 429 aa9.74□□□□□ -0.85
SMG6-204ENST00000570606 AFF2P51816 1311 aa9.74□□□□□ -0.85
SMG6-204ENST00000570606 LAMC1P11047 1609 aa9.74□□□□□ -0.85
SMG6-204ENST00000570606 PNPLA6Q8IY17 1366 aa9.74□□□□□ -0.85
SMG6-204ENST00000570606 CDC42BPGQ6DT37 1551 aa9.73□□□□□ -0.85
SMG6-204ENST00000570606 DDX17Q92841 729 aaKnown RBP9.73□□□□□ -0.85
SMG6-204ENST00000570606 LRRC59Q96AG4 307 aaKnown RBP9.73□□□□□ -0.85
SMG6-204ENST00000570606 ROBO2Q9HCK4 1378 aa9.73□□□□□ -0.85
SMG6-204ENST00000570606 IFT172Q9UG01 1749 aa9.73□□□□□ -0.85
SMG6-204ENST00000570606 PRAG1Q86YV5 1406 aa9.73□□□□□ -0.85
SMG6-204ENST00000570606 CDK12Q9NYV4 1490 aaPredicted RBP9.72□□□□□ -0.85
SMG6-204ENST00000570606 RXRBP28702 533 aa9.72□□□□□ -0.85
SMG6-204ENST00000570606 PIP4P2Q8N4L2 257 aa9.72□□□□□ -0.85
SMG6-204ENST00000570606 C8orf37Q96NL8 207 aa9.72□□□□□ -0.85
SMG6-204ENST00000570606 RPGRIP1LQ68CZ1 1315 aa9.72□□□□□ -0.85
SMG6-204ENST00000570606 CCDC144AA2RUR9 1427 aa9.72□□□□□ -0.85
SMG6-204ENST00000570606 KNDC1Q76NI1 1749 aa9.71□□□□□ -0.85
SMG6-204ENST00000570606 PCDHB8Q9UN66 801 aa9.7□□□□□ -0.86
SMG6-204ENST00000570606 PCDHB13Q9Y5F0 798 aa9.7□□□□□ -0.86
SMG6-204ENST00000570606 RGS12O14924 1447 aa9.69□□□□□ -0.86
SMG6-204ENST00000570606 PDAP1Q13442 181 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms