RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 CABP2Q9NPB3 220 aa14.94□□□□□ -0.02
PDXDC1-216ENST00000569715 CPS1P31327 1500 aa14.93□□□□□ -0.02
PDXDC1-216ENST00000569715 SLC12A5Q9H2X9 1139 aa14.92□□□□□ -0.02
PDXDC1-216ENST00000569715 TECPR2O15040 1411 aa14.92□□□□□ -0.02
PDXDC1-216ENST00000569715 TMC1Q8TDI8 760 aa14.92□□□□□ -0.02
PDXDC1-216ENST00000569715 CARD14Q9BXL6 1004 aa14.92□□□□□ -0.02
PDXDC1-216ENST00000569715 RALBP1Q15311 655 aa14.91□□□□□ -0.02
PDXDC1-216ENST00000569715 AMER1Q5JTC6 1135 aaPredicted RBP14.91□□□□□ -0.02
PDXDC1-216ENST00000569715 KNSTRNQ9Y448 316 aa14.91□□□□□ -0.02
PDXDC1-216ENST00000569715 PTPRUQ92729 1446 aa14.91□□□□□ -0.02
PDXDC1-216ENST00000569715 MYBBP1AQ9BQG0 1328 aaKnown RBP14.9□□□□□ -0.02
PDXDC1-216ENST00000569715 ROBO2Q9HCK4 1378 aa14.9□□□□□ -0.02
PDXDC1-216ENST00000569715 SRPK2P78362 688 aaKnown RBP14.89□□□□□ -0.03
PDXDC1-216ENST00000569715 FAM9BQ8IZU0 186 aa14.88□□□□□ -0.03
PDXDC1-216ENST00000569715 FAM135BQ49AJ0 1406 aa14.88□□□□□ -0.03
PDXDC1-216ENST00000569715 DIP2AQ14689 1571 aa14.88□□□□□ -0.03
PDXDC1-216ENST00000569715 PUS7Q96PZ0 661 aaKnown RBP14.87□□□□□ -0.03
PDXDC1-216ENST00000569715 CDK19Q9BWU1 502 aa14.87□□□□□ -0.03
PDXDC1-216ENST00000569715 NSD3Q9BZ95 1437 aa14.87□□□□□ -0.03
PDXDC1-216ENST00000569715 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.86□□□□□ -0.03
PDXDC1-216ENST00000569715 TBX22Q9Y458 520 aa14.86□□□□□ -0.03
PDXDC1-216ENST00000569715 BRD4O60885 1362 aaPredicted RBP14.85□□□□□ -0.03
PDXDC1-216ENST00000569715 XRN1Q8IZH2 1706 aaKnown RBP14.85□□□□□ -0.03
PDXDC1-216ENST00000569715 ATAD2Q6PL18 1390 aa14.85□□□□□ -0.03
PDXDC1-216ENST00000569715 ANKRD36BQ8N2N9 1353 aa14.84□□□□□ -0.03
PDXDC1-216ENST00000569715 NPC1L1Q9UHC9 1359 aa14.84□□□□□ -0.03
PDXDC1-216ENST00000569715 NLRP13Q86W25 1043 aa14.84□□□□□ -0.03
PDXDC1-216ENST00000569715 SIRT1Q96EB6 747 aa14.84□□□□□ -0.03
PDXDC1-216ENST00000569715 CD163L1Q9NR16 1453 aa14.84□□□□□ -0.03
PDXDC1-216ENST00000569715 A0A1W2PP64 1363 aa14.84□□□□□ -0.03
PDXDC1-216ENST00000569715 ANKLE2Q86XL3 938 aa14.83□□□□□ -0.03
PDXDC1-216ENST00000569715 AMOTL2Q9Y2J4 779 aa14.83□□□□□ -0.03
PDXDC1-216ENST00000569715 USP32Q8NFA0 1604 aa14.83□□□□□ -0.04
PDXDC1-216ENST00000569715 HNRNPUQ00839 825 aaKnown RBP eCLIP14.83□□□□□ -0.04
PDXDC1-216ENST00000569715 WASLO00401 505 aaPredicted RBP14.82□□□□□ -0.04
PDXDC1-216ENST00000569715 PNISRQ8TF01 805 aaKnown RBP14.82□□□□□ -0.04
PDXDC1-216ENST00000569715 ADGRB2O60241 1585 aa14.82□□□□□ -0.04
PDXDC1-216ENST00000569715 NINLQ9Y2I6 1382 aa14.81□□□□□ -0.04
PDXDC1-216ENST00000569715 PTCH1Q13635 1447 aa14.81□□□□□ -0.04
PDXDC1-216ENST00000569715 PPP2R1AP30153 589 aa14.81□□□□□ -0.04
PDXDC1-216ENST00000569715 CABP1Q9NZU7 370 aa14.8□□□□□ -0.04
PDXDC1-216ENST00000569715 CHD2O14647 1828 aaKnown RBP14.79□□□□□ -0.04
PDXDC1-216ENST00000569715 NCKAP5LQ9HCH0 1330 aa14.79□□□□□ -0.04
PDXDC1-216ENST00000569715 KCNA6P17658 529 aa14.78□□□□□ -0.04
PDXDC1-216ENST00000569715 ATP7BP35670 1465 aa14.78□□□□□ -0.04
PDXDC1-216ENST00000569715 NPHP4O75161 1426 aaPredicted RBP14.78□□□□□ -0.04
PDXDC1-216ENST00000569715 KDM4FA0A1W2PPD8 638 aa14.78□□□□□ -0.04
PDXDC1-216ENST00000569715 PRR36Q9H6K5 1346 aa14.77□□□□□ -0.04
PDXDC1-216ENST00000569715 PPIP5K1Q6PFW1 1433 aa14.77□□□□□ -0.04
PDXDC1-216ENST00000569715 PIK3R4Q99570 1358 aa14.77□□□□□ -0.05
PDXDC1-216ENST00000569715 CGNL1Q0VF96 1302 aa14.76□□□□□ -0.05
PDXDC1-216ENST00000569715 SENP3-EIF4A1A0A087X0R7 540 aa14.76□□□□□ -0.05
PDXDC1-216ENST00000569715 NUDT16Q96DE0 195 aaKnown RBP14.76□□□□□ -0.05
PDXDC1-216ENST00000569715 TERF2IPQ9NYB0 399 aa14.76□□□□□ -0.05
PDXDC1-216ENST00000569715 TOPAZ1Q8N9V7 1692 aa14.75□□□□□ -0.05
PDXDC1-216ENST00000569715 NUTM2FA1L443 756 aa14.75□□□□□ -0.05
PDXDC1-216ENST00000569715 SCAF1Q9H7N4 1312 aaKnown RBP14.75□□□□□ -0.05
PDXDC1-216ENST00000569715 KIF20BQ96Q89 1820 aa14.74□□□□□ -0.05
PDXDC1-216ENST00000569715 TNNT2P45379 298 aaPredicted RBP14.74□□□□□ -0.05
PDXDC1-216ENST00000569715 CDC42BPGQ6DT37 1551 aa14.74□□□□□ -0.05
PDXDC1-216ENST00000569715 ANKRD26Q9UPS8 1709 aa14.74□□□□□ -0.05
PDXDC1-216ENST00000569715 HDGFL2Q7Z4V5 671 aaPredicted RBP14.74□□□□□ -0.05
PDXDC1-216ENST00000569715 MORC1Q86VD1 984 aa14.74□□□□□ -0.05
PDXDC1-216ENST00000569715 ITSN1Q15811 1721 aa14.73□□□□□ -0.05
PDXDC1-216ENST00000569715 RGPD8O14715 1765 aaPredicted RBP14.73□□□□□ -0.05
PDXDC1-216ENST00000569715 NALCNQ8IZF0 1738 aa14.73□□□□□ -0.05
PDXDC1-216ENST00000569715 AKAP12Q02952 1782 aa14.73□□□□□ -0.05
PDXDC1-216ENST00000569715 CPSF1Q10570 1443 aaKnown RBP14.73□□□□□ -0.05
PDXDC1-216ENST00000569715 MON2Q7Z3U7 1717 aa14.72□□□□□ -0.05
PDXDC1-216ENST00000569715 CCDC61Q9Y6R9 512 aa14.72□□□□□ -0.05
PDXDC1-216ENST00000569715 NKTRP30414 1462 aaKnown RBP14.72□□□□□ -0.05
PDXDC1-216ENST00000569715 NSD2O96028 1365 aa14.72□□□□□ -0.05
PDXDC1-216ENST00000569715 RBM33Q96EV2 1170 aaKnown RBP14.72□□□□□ -0.05
PDXDC1-216ENST00000569715 GGNBP2Q9H3C7 697 aa14.72□□□□□ -0.05
PDXDC1-216ENST00000569715 HSPA2P54652 639 aa14.71□□□□□ -0.05
PDXDC1-216ENST00000569715 FYB1O15117 783 aa14.71□□□□□ -0.06
PDXDC1-216ENST00000569715 GTF3C3Q9Y5Q9 886 aa14.71□□□□□ -0.06
PDXDC1-216ENST00000569715 ZBED9Q6R2W3 1325 aa14.7□□□□□ -0.06
PDXDC1-216ENST00000569715 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.7□□□□□ -0.06
PDXDC1-216ENST00000569715 FMN2Q9NZ56 1722 aa14.69□□□□□ -0.06
PDXDC1-216ENST00000569715 NWD1Q149M9 1564 aa14.69□□□□□ -0.06
PDXDC1-216ENST00000569715 EDC4Q6P2E9 1401 aaKnown RBP14.68□□□□□ -0.06
PDXDC1-216ENST00000569715 LMTK3Q96Q04 1460 aa14.68□□□□□ -0.06
PDXDC1-216ENST00000569715 NRKQ7Z2Y5 1582 aa14.67□□□□□ -0.06
PDXDC1-216ENST00000569715 SHPRHQ149N8 1683 aa14.67□□□□□ -0.06
PDXDC1-216ENST00000569715 BLMP54132 1417 aaPredicted RBP14.67□□□□□ -0.06
PDXDC1-216ENST00000569715 ADAMTS8Q9UP79 889 aa14.67□□□□□ -0.06
PDXDC1-216ENST00000569715 ACEP12821 1306 aa14.65□□□□□ -0.06
PDXDC1-216ENST00000569715 NME9Q86XW9 330 aa14.65□□□□□ -0.06
PDXDC1-216ENST00000569715 STRCP1A6NGW2 1772 aa14.65□□□□□ -0.06
PDXDC1-216ENST00000569715 POLR3AO14802 1390 aaPredicted RBP14.65□□□□□ -0.06
PDXDC1-216ENST00000569715 MTHFSP49914 203 aa14.65□□□□□ -0.06
PDXDC1-216ENST00000569715 ZRANB1Q9UGI0 708 aa14.65□□□□□ -0.06
PDXDC1-216ENST00000569715 PLEKHG3A1L390 1219 aa14.64□□□□□ -0.07
PDXDC1-216ENST00000569715 WDR43Q15061 677 aaKnown RBP eCLIP14.64□□□□□ -0.07
PDXDC1-216ENST00000569715 ADGRL3Q9HAR2 1447 aa14.64□□□□□ -0.07
PDXDC1-216ENST00000569715 PMFBP1Q8TBY8 1022 aa14.64□□□□□ -0.07
PDXDC1-216ENST00000569715 STRCQ7RTU9 1775 aa14.63□□□□□ -0.07
PDXDC1-216ENST00000569715 FBLN1P23142 703 aa14.62□□□□□ -0.07
PDXDC1-216ENST00000569715 USP6P35125 1406 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms