RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 TXNDC2Q86VQ3 553 aa30.66■■■□□ 2.5
VCPKMT-205ENST00000569518 THEMISQ8N1K5 641 aaPredicted RBP30.66■■■□□ 2.5
VCPKMT-205ENST00000569518 EID1Q9Y6B2 187 aa30.63■■■□□ 2.49
VCPKMT-205ENST00000569518 NLRP13Q86W25 1043 aa30.63■■■□□ 2.49
VCPKMT-205ENST00000569518 CARD14Q9BXL6 1004 aa30.63■■■□□ 2.49
VCPKMT-205ENST00000569518 FAM135BQ49AJ0 1406 aa30.62■■■□□ 2.49
VCPKMT-205ENST00000569518 PLEKHH1Q9ULM0 1364 aa30.62■■■□□ 2.49
VCPKMT-205ENST00000569518 MINK1Q8N4C8 1332 aaPredicted RBP30.62■■■□□ 2.49
VCPKMT-205ENST00000569518 FAM9BQ8IZU0 186 aa30.6■■■□□ 2.49
VCPKMT-205ENST00000569518 SIRT1Q96EB6 747 aa30.6■■■□□ 2.49
VCPKMT-205ENST00000569518 SLC12A5Q9H2X9 1139 aa30.59■■■□□ 2.49
VCPKMT-205ENST00000569518 USP32Q8NFA0 1604 aa30.59■■■□□ 2.49
VCPKMT-205ENST00000569518 NINLQ9Y2I6 1382 aa30.59■■■□□ 2.49
VCPKMT-205ENST00000569518 TMC1Q8TDI8 760 aa30.59■■■□□ 2.49
VCPKMT-205ENST00000569518 CABP2Q9NPB3 220 aa30.59■■■□□ 2.49
VCPKMT-205ENST00000569518 SETD1BQ9UPS6 1966 aaKnown RBP30.58■■■□□ 2.49
VCPKMT-205ENST00000569518 DIP2AQ14689 1571 aa30.58■■■□□ 2.49
VCPKMT-205ENST00000569518 PNISRQ8TF01 805 aaKnown RBP30.58■■■□□ 2.49
VCPKMT-205ENST00000569518 BCANQ96GW7 911 aa30.58■■■□□ 2.49
VCPKMT-205ENST00000569518 WAPLQ7Z5K2 1190 aa30.57■■■□□ 2.48
VCPKMT-205ENST00000569518 ATAD2Q6PL18 1390 aa30.56■■■□□ 2.48
VCPKMT-205ENST00000569518 HNRNPUQ00839 825 aaKnown RBP eCLIP30.55■■■□□ 2.48
VCPKMT-205ENST00000569518 ANKRD36BQ8N2N9 1353 aa30.54■■■□□ 2.48
VCPKMT-205ENST00000569518 NSD3Q9BZ95 1437 aa30.54■■■□□ 2.48
VCPKMT-205ENST00000569518 SCAF1Q9H7N4 1312 aaKnown RBP30.53■■■□□ 2.48
VCPKMT-205ENST00000569518 SRPK2P78362 688 aaKnown RBP30.53■■■□□ 2.48
VCPKMT-205ENST00000569518 TBX22Q9Y458 520 aa30.51■■■□□ 2.47
VCPKMT-205ENST00000569518 PTPRUQ92729 1446 aa30.5■■■□□ 2.47
VCPKMT-205ENST00000569518 CDK19Q9BWU1 502 aa30.5■■■□□ 2.47
VCPKMT-205ENST00000569518 ROBO2Q9HCK4 1378 aa30.5■■■□□ 2.47
VCPKMT-205ENST00000569518 SLC26A8Q96RN1 970 aa30.48■■■□□ 2.47
VCPKMT-205ENST00000569518 PPP2R1AP30153 589 aa30.47■■■□□ 2.47
VCPKMT-205ENST00000569518 CD163L1Q9NR16 1453 aa30.47■■■□□ 2.47
VCPKMT-205ENST00000569518 ADGRB2O60241 1585 aa30.46■■■□□ 2.47
VCPKMT-205ENST00000569518 A0A1W2PP64 1363 aa30.45■■■□□ 2.46
VCPKMT-205ENST00000569518 XRN1Q8IZH2 1706 aaKnown RBP30.44■■■□□ 2.46
VCPKMT-205ENST00000569518 GTF3C3Q9Y5Q9 886 aa30.43■■■□□ 2.46
VCPKMT-205ENST00000569518 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.43■■■□□ 2.46
VCPKMT-205ENST00000569518 PTCH1Q13635 1447 aa30.42■■■□□ 2.46
VCPKMT-205ENST00000569518 WASLO00401 505 aaPredicted RBP30.41■■■□□ 2.46
VCPKMT-205ENST00000569518 ZBED9Q6R2W3 1325 aa30.4■■■□□ 2.46
VCPKMT-205ENST00000569518 CGNL1Q0VF96 1302 aa30.39■■■□□ 2.46
VCPKMT-205ENST00000569518 NSD2O96028 1365 aa30.38■■■□□ 2.45
VCPKMT-205ENST00000569518 ATP7BP35670 1465 aa30.38■■■□□ 2.45
VCPKMT-205ENST00000569518 PIK3R4Q99570 1358 aa30.38■■■□□ 2.45
VCPKMT-205ENST00000569518 INSRP06213 1382 aa30.37■■■□□ 2.45
VCPKMT-205ENST00000569518 ANKLE2Q86XL3 938 aa30.37■■■□□ 2.45
VCPKMT-205ENST00000569518 TERF2IPQ9NYB0 399 aa30.37■■■□□ 2.45
VCPKMT-205ENST00000569518 AMOTL2Q9Y2J4 779 aa30.36■■■□□ 2.45
VCPKMT-205ENST00000569518 CABP1Q9NZU7 370 aa30.33■■■□□ 2.45
VCPKMT-205ENST00000569518 ANKRD26Q9UPS8 1709 aa30.32■■■□□ 2.44
VCPKMT-205ENST00000569518 BLMP54132 1417 aaPredicted RBP30.29■■■□□ 2.44
VCPKMT-205ENST00000569518 PPIP5K1Q6PFW1 1433 aa30.29■■■□□ 2.44
VCPKMT-205ENST00000569518 CHD2O14647 1828 aaKnown RBP30.29■■■□□ 2.44
VCPKMT-205ENST00000569518 CPSF1Q10570 1443 aaKnown RBP30.29■■■□□ 2.44
VCPKMT-205ENST00000569518 CDC42BPGQ6DT37 1551 aa30.29■■■□□ 2.44
VCPKMT-205ENST00000569518 HDGFL2Q7Z4V5 671 aaPredicted RBP30.29■■■□□ 2.44
VCPKMT-205ENST00000569518 MORC1Q86VD1 984 aa30.29■■■□□ 2.44
VCPKMT-205ENST00000569518 TOPAZ1Q8N9V7 1692 aa30.29■■■□□ 2.44
VCPKMT-205ENST00000569518 NUDT16Q96DE0 195 aaKnown RBP30.27■■■□□ 2.44
VCPKMT-205ENST00000569518 KIF20BQ96Q89 1820 aa30.27■■■□□ 2.44
VCPKMT-205ENST00000569518 PRR36Q9H6K5 1346 aa30.25■■■□□ 2.43
VCPKMT-205ENST00000569518 AKAP12Q02952 1782 aa30.24■■■□□ 2.43
VCPKMT-205ENST00000569518 MON2Q7Z3U7 1717 aa30.24■■■□□ 2.43
VCPKMT-205ENST00000569518 CCDC61Q9Y6R9 512 aa30.24■■■□□ 2.43
VCPKMT-205ENST00000569518 NPHP4O75161 1426 aaPredicted RBP30.24■■■□□ 2.43
VCPKMT-205ENST00000569518 POLR3AO14802 1390 aaPredicted RBP30.23■■■□□ 2.43
VCPKMT-205ENST00000569518 KCNA6P17658 529 aa30.22■■■□□ 2.43
VCPKMT-205ENST00000569518 ITSN1Q15811 1721 aa30.21■■■□□ 2.43
VCPKMT-205ENST00000569518 FYB1O15117 783 aa30.2■■■□□ 2.43
VCPKMT-205ENST00000569518 EDC4Q6P2E9 1401 aaKnown RBP30.19■■■□□ 2.42
VCPKMT-205ENST00000569518 NCKAP5LQ9HCH0 1330 aa30.18■■■□□ 2.42
VCPKMT-205ENST00000569518 ADAMTS8Q9UP79 889 aa30.17■■■□□ 2.42
VCPKMT-205ENST00000569518 SHPRHQ149N8 1683 aa30.16■■■□□ 2.42
VCPKMT-205ENST00000569518 WDR43Q15061 677 aaKnown RBP eCLIP30.15■■■□□ 2.42
VCPKMT-205ENST00000569518 GGNBP2Q9H3C7 697 aa30.15■■■□□ 2.42
VCPKMT-205ENST00000569518 TNNT2P45379 298 aaPredicted RBP30.15■■■□□ 2.42
VCPKMT-205ENST00000569518 NKTRP30414 1462 aaKnown RBP30.13■■■□□ 2.41
VCPKMT-205ENST00000569518 NRKQ7Z2Y5 1582 aa30.12■■■□□ 2.41
VCPKMT-205ENST00000569518 NALCNQ8IZF0 1738 aa30.12■■■□□ 2.41
VCPKMT-205ENST00000569518 PLEKHG3A1L390 1219 aa30.11■■■□□ 2.41
VCPKMT-205ENST00000569518 NWD1Q149M9 1564 aa30.11■■■□□ 2.41
VCPKMT-205ENST00000569518 FMN2Q9NZ56 1722 aa30.11■■■□□ 2.41
VCPKMT-205ENST00000569518 SMG6Q86US8 1419 aaKnown RBP30.09■■■□□ 2.41
VCPKMT-205ENST00000569518 MTHFSP49914 203 aa30.09■■■□□ 2.41
VCPKMT-205ENST00000569518 SENP3-EIF4A1A0A087X0R7 540 aa30.08■■■□□ 2.41
VCPKMT-205ENST00000569518 ZNF692Q9BU19 519 aaPredicted RBP30.08■■■□□ 2.41
VCPKMT-205ENST00000569518 RGPD8O14715 1765 aaPredicted RBP30.07■■■□□ 2.41
VCPKMT-205ENST00000569518 ANKARQ7Z5J8 1434 aa30.07■■■□□ 2.4
VCPKMT-205ENST00000569518 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.06■■■□□ 2.4
VCPKMT-205ENST00000569518 KDM4FA0A1W2PPD8 638 aa30.03■■■□□ 2.4
VCPKMT-205ENST00000569518 ACEP12821 1306 aa30.03■■■□□ 2.4
VCPKMT-205ENST00000569518 NUTM2FA1L443 756 aa30.03■■■□□ 2.4
VCPKMT-205ENST00000569518 COL3A1P02461 1466 aaPredicted RBP30.03■■■□□ 2.4
VCPKMT-205ENST00000569518 USP6P35125 1406 aa30.02■■■□□ 2.4
VCPKMT-205ENST00000569518 CFAP53Q96M91 514 aa30.01■■■□□ 2.4
VCPKMT-205ENST00000569518 ADGRL3Q9HAR2 1447 aa30.01■■■□□ 2.39
VCPKMT-205ENST00000569518 NME9Q86XW9 330 aa30■■■□□ 2.39
VCPKMT-205ENST00000569518 NUDCQ9Y266 331 aa29.99■■■□□ 2.39
VCPKMT-205ENST00000569518 SSH2Q76I76 1423 aa29.99■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms