RNA–Protein interactions for RNA: ENST00000569418.5

CYLD-214, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-214ENST00000569418 SETD1BQ9UPS6 1966 aaKnown RBP17.63■□□□□ 0.41
CYLD-214ENST00000569418 ARHGEF28Q8N1W1 1705 aaKnown RBP17.63■□□□□ 0.41
CYLD-214ENST00000569418 CDK19Q9BWU1 502 aa17.62■□□□□ 0.41
CYLD-214ENST00000569418 NRXN3Q9Y4C0 1643 aa17.62■□□□□ 0.41
CYLD-214ENST00000569418 ABCC11Q96J66 1382 aa17.62■□□□□ 0.41
CYLD-214ENST00000569418 KCNA6P17658 529 aa17.61■□□□□ 0.41
CYLD-214ENST00000569418 ARHGAP23Q9P227 1491 aa17.61■□□□□ 0.41
CYLD-214ENST00000569418 CENPBP07199 599 aaPredicted RBP17.61■□□□□ 0.41
CYLD-214ENST00000569418 SLIT1O75093 1534 aa17.61■□□□□ 0.41
CYLD-214ENST00000569418 FAM9BQ8IZU0 186 aa17.6■□□□□ 0.41
CYLD-214ENST00000569418 KTN1Q86UP2 1357 aaKnown RBP17.59■□□□□ 0.41
CYLD-214ENST00000569418 TBX22Q9Y458 520 aa17.59■□□□□ 0.41
CYLD-214ENST00000569418 CABP1Q9NZU7 370 aa17.58■□□□□ 0.4
CYLD-214ENST00000569418 TULP4Q9NRJ4 1543 aa17.57■□□□□ 0.4
CYLD-214ENST00000569418 RALBP1Q15311 655 aa17.56■□□□□ 0.4
CYLD-214ENST00000569418 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.56■□□□□ 0.4
CYLD-214ENST00000569418 SETD1AO15047 1707 aaKnown RBP17.56■□□□□ 0.4
CYLD-214ENST00000569418 ROBO2Q9HCK4 1378 aa17.56■□□□□ 0.4
CYLD-214ENST00000569418 CARD14Q9BXL6 1004 aa17.56■□□□□ 0.4
CYLD-214ENST00000569418 PMFBP1Q8TBY8 1022 aa17.55■□□□□ 0.4
CYLD-214ENST00000569418 SOX12O15370 315 aa17.54■□□□□ 0.4
CYLD-214ENST00000569418 PROSER2Q86WR7 435 aaPredicted RBP17.54■□□□□ 0.4
CYLD-214ENST00000569418 PTPRUQ92729 1446 aa17.53■□□□□ 0.4
CYLD-214ENST00000569418 AMER1Q5JTC6 1135 aaPredicted RBP17.52■□□□□ 0.4
CYLD-214ENST00000569418 MYBBP1AQ9BQG0 1328 aaKnown RBP17.52■□□□□ 0.4
CYLD-214ENST00000569418 WASLO00401 505 aaPredicted RBP17.52■□□□□ 0.4
CYLD-214ENST00000569418 DLC1Q96QB1 1528 aa17.51■□□□□ 0.39
CYLD-214ENST00000569418 MED14O60244 1454 aa17.51■□□□□ 0.39
CYLD-214ENST00000569418 MYOM1P52179 1685 aa17.51■□□□□ 0.39
CYLD-214ENST00000569418 SALL2Q9Y467 1007 aaPredicted RBP17.5■□□□□ 0.39
CYLD-214ENST00000569418 ATAD2Q6PL18 1390 aa17.5■□□□□ 0.39
CYLD-214ENST00000569418 NSD3Q9BZ95 1437 aa17.5■□□□□ 0.39
CYLD-214ENST00000569418 SIRT1Q96EB6 747 aa17.5■□□□□ 0.39
CYLD-214ENST00000569418 PUS7Q96PZ0 661 aaKnown RBP17.5■□□□□ 0.39
CYLD-214ENST00000569418 HNRNPUQ00839 825 aaKnown RBP eCLIP17.49■□□□□ 0.39
CYLD-214ENST00000569418 NUDT16Q96DE0 195 aaKnown RBP17.49■□□□□ 0.39
CYLD-214ENST00000569418 PARD3Q8TEW0 1356 aa17.49■□□□□ 0.39
CYLD-214ENST00000569418 TECPR2O15040 1411 aa17.49■□□□□ 0.39
CYLD-214ENST00000569418 FAM135BQ49AJ0 1406 aa17.49■□□□□ 0.39
CYLD-214ENST00000569418 PPM1GO15355 546 aaPredicted RBP17.48■□□□□ 0.39
CYLD-214ENST00000569418 NLRP13Q86W25 1043 aa17.48■□□□□ 0.39
CYLD-214ENST00000569418 TERF2IPQ9NYB0 399 aa17.48■□□□□ 0.39
CYLD-214ENST00000569418 GGNBP2Q9H3C7 697 aa17.48■□□□□ 0.39
CYLD-214ENST00000569418 ZNF142P52746 1687 aaPredicted RBP17.47■□□□□ 0.39
CYLD-214ENST00000569418 FBLN1P23142 703 aa17.47■□□□□ 0.39
CYLD-214ENST00000569418 LMOD2Q6P5Q4 547 aa17.47■□□□□ 0.39
CYLD-214ENST00000569418 HDGFL2Q7Z4V5 671 aaPredicted RBP17.47■□□□□ 0.39
CYLD-214ENST00000569418 NPHP4O75161 1426 aaPredicted RBP17.47■□□□□ 0.39
CYLD-214ENST00000569418 XPCQ01831 940 aaPredicted RBP17.46■□□□□ 0.38
CYLD-214ENST00000569418 NUTM2GQ5VZR2 741 aa17.46■□□□□ 0.38
CYLD-214ENST00000569418 NGDNQ8NEJ9 315 aaKnown RBP17.46■□□□□ 0.38
CYLD-214ENST00000569418 PAK3O75914 559 aaPredicted RBP17.45■□□□□ 0.38
CYLD-214ENST00000569418 AEBP2Q6ZN18 517 aaPredicted RBP17.45■□□□□ 0.38
CYLD-214ENST00000569418 A0A1W2PP64 1363 aa17.45■□□□□ 0.38
CYLD-214ENST00000569418 ANKRD36BQ8N2N9 1353 aa17.45■□□□□ 0.38
CYLD-214ENST00000569418 MORC1Q86VD1 984 aa17.44■□□□□ 0.38
CYLD-214ENST00000569418 CPS1P31327 1500 aa17.44■□□□□ 0.38
CYLD-214ENST00000569418 CGNL1Q0VF96 1302 aa17.44■□□□□ 0.38
CYLD-214ENST00000569418 PPP2R1AP30153 589 aa17.43■□□□□ 0.38
CYLD-214ENST00000569418 CCDC61Q9Y6R9 512 aa17.43■□□□□ 0.38
CYLD-214ENST00000569418 ESCO1Q5FWF5 840 aa17.42■□□□□ 0.38
CYLD-214ENST00000569418 BRD4O60885 1362 aaPredicted RBP17.42■□□□□ 0.38
CYLD-214ENST00000569418 PRR36Q9H6K5 1346 aa17.41■□□□□ 0.38
CYLD-214ENST00000569418 DIP2AQ14689 1571 aa17.41■□□□□ 0.38
CYLD-214ENST00000569418 KNDC1Q76NI1 1749 aa17.41■□□□□ 0.38
CYLD-214ENST00000569418 PNISRQ8TF01 805 aaKnown RBP17.41■□□□□ 0.38
CYLD-214ENST00000569418 ZRANB1Q9UGI0 708 aa17.41■□□□□ 0.38
CYLD-214ENST00000569418 PPIP5K1Q6PFW1 1433 aa17.41■□□□□ 0.38
CYLD-214ENST00000569418 NINLQ9Y2I6 1382 aa17.41■□□□□ 0.38
CYLD-214ENST00000569418 ZBTB7CA1YPR0 619 aa17.41■□□□□ 0.38
CYLD-214ENST00000569418 PIK3R4Q99570 1358 aa17.4■□□□□ 0.38
CYLD-214ENST00000569418 ZNF335Q9H4Z2 1342 aaPredicted RBP17.4■□□□□ 0.38
CYLD-214ENST00000569418 SCAF1Q9H7N4 1312 aaKnown RBP17.39■□□□□ 0.37
CYLD-214ENST00000569418 PTCH1Q13635 1447 aa17.39■□□□□ 0.37
CYLD-214ENST00000569418 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.38■□□□□ 0.37
CYLD-214ENST00000569418 NPC1L1Q9UHC9 1359 aa17.38■□□□□ 0.37
CYLD-214ENST00000569418 FOXO3O43524 673 aa17.37■□□□□ 0.37
CYLD-214ENST00000569418 NME9Q86XW9 330 aa17.36■□□□□ 0.37
CYLD-214ENST00000569418 DDX17Q92841 729 aaKnown RBP17.36■□□□□ 0.37
CYLD-214ENST00000569418 ORAI2Q96SN7 254 aa17.36■□□□□ 0.37
CYLD-214ENST00000569418 FYB1O15117 783 aa17.35■□□□□ 0.37
CYLD-214ENST00000569418 ACEP12821 1306 aa17.35■□□□□ 0.37
CYLD-214ENST00000569418 CD163L1Q9NR16 1453 aa17.35■□□□□ 0.37
CYLD-214ENST00000569418 ATF3P18847 181 aa17.35■□□□□ 0.37
CYLD-214ENST00000569418 ATP7BP35670 1465 aa17.33■□□□□ 0.37
CYLD-214ENST00000569418 XRN1Q8IZH2 1706 aaKnown RBP17.33■□□□□ 0.36
CYLD-214ENST00000569418 WDR43Q15061 677 aaKnown RBP eCLIP17.33■□□□□ 0.36
CYLD-214ENST00000569418 PSME1Q06323 249 aa17.32■□□□□ 0.36
CYLD-214ENST00000569418 MTHFSP49914 203 aa17.31■□□□□ 0.36
CYLD-214ENST00000569418 CHD2O14647 1828 aaKnown RBP17.3■□□□□ 0.36
CYLD-214ENST00000569418 ZNF692Q9BU19 519 aaPredicted RBP17.3■□□□□ 0.36
CYLD-214ENST00000569418 TMEM94Q12767 1356 aa17.3■□□□□ 0.36
CYLD-214ENST00000569418 LMTK3Q96Q04 1460 aa17.29■□□□□ 0.36
CYLD-214ENST00000569418 ADAMTS8Q9UP79 889 aa17.29■□□□□ 0.36
CYLD-214ENST00000569418 NSD2O96028 1365 aa17.28■□□□□ 0.36
CYLD-214ENST00000569418 PLEKHG3A1L390 1219 aa17.28■□□□□ 0.36
CYLD-214ENST00000569418 PHF8Q9UPP1 1060 aa17.28■□□□□ 0.36
CYLD-214ENST00000569418 RRS1Q15050 365 aaKnown RBP17.28■□□□□ 0.36
CYLD-214ENST00000569418 CPSF1Q10570 1443 aaKnown RBP17.28■□□□□ 0.36
CYLD-214ENST00000569418 U2SURPO15042 1029 aaKnown RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms