RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 CABLES1Q8TDN4 633 aa9.21□□□□□ -0.94
CNOT1-209ENST00000566240 HOXA2O43364 376 aa9.2□□□□□ -0.94
CNOT1-209ENST00000566240 HRCP23327 699 aa9.2□□□□□ -0.94
CNOT1-209ENST00000566240 MRPL50Q8N5N7 158 aaKnown RBP9.2□□□□□ -0.94
CNOT1-209ENST00000566240 ZBTB3Q9H5J0 574 aa9.2□□□□□ -0.94
CNOT1-209ENST00000566240 FDX1P10109 184 aa9.19□□□□□ -0.94
CNOT1-209ENST00000566240 ABL2P42684 1182 aa9.19□□□□□ -0.94
CNOT1-209ENST00000566240 SWT1Q5T5J6 900 aaKnown RBP9.19□□□□□ -0.94
CNOT1-209ENST00000566240 WNT2BQ93097 391 aa9.19□□□□□ -0.94
CNOT1-209ENST00000566240 GOLGA8CPA6NN73 597 aa9.18□□□□□ -0.94
CNOT1-209ENST00000566240 SLC10A3P09131 477 aa9.18□□□□□ -0.94
CNOT1-209ENST00000566240 USP17L8P0C7I0 530 aa9.18□□□□□ -0.94
CNOT1-209ENST00000566240 RABGEF1Q9UJ41 708 aa9.18□□□□□ -0.94
CNOT1-209ENST00000566240 HDGFP51858 240 aaKnown RBP9.17□□□□□ -0.94
CNOT1-209ENST00000566240 NBPF3Q9H094 633 aa9.17□□□□□ -0.94
CNOT1-209ENST00000566240 TBC1D2BQ9UPU7 963 aa9.17□□□□□ -0.94
CNOT1-209ENST00000566240 IFFO2Q5TF58 517 aa9.16□□□□□ -0.94
CNOT1-209ENST00000566240 SEPT9Q9UHD8 586 aaPredicted RBP9.16□□□□□ -0.94
CNOT1-209ENST00000566240 PCDHGC3Q9UN70 934 aa9.16□□□□□ -0.94
CNOT1-209ENST00000566240 GUCA2AQ02747 115 aa9.15□□□□□ -0.94
CNOT1-209ENST00000566240 HLA-CQ95604 372 aa9.14□□□□□ -0.95
CNOT1-209ENST00000566240 A0A0G2JS52 829 aa9.13□□□□□ -0.95
CNOT1-209ENST00000566240 SLC4A3P48751 1232 aa9.13□□□□□ -0.95
CNOT1-209ENST00000566240 CTDSPL2Q05D32 466 aa9.13□□□□□ -0.95
CNOT1-209ENST00000566240 MTMR2Q13614 643 aa9.13□□□□□ -0.95
CNOT1-209ENST00000566240 GJD4Q96KN9 370 aaPredicted RBP9.13□□□□□ -0.95
CNOT1-209ENST00000566240 CALR3Q96L12 384 aaKnown RBP9.13□□□□□ -0.95
CNOT1-209ENST00000566240 POM121CA8CG34 1229 aa9.12□□□□□ -0.95
CNOT1-209ENST00000566240 FAM98CQ17RN3 349 aaKnown RBP9.12□□□□□ -0.95
CNOT1-209ENST00000566240 GRIPAP1Q4V328 841 aa9.12□□□□□ -0.95
CNOT1-209ENST00000566240 NDUFB9Q9Y6M9 179 aa9.12□□□□□ -0.95
CNOT1-209ENST00000566240 SLF2Q8IX21 1173 aa9.11□□□□□ -0.95
CNOT1-209ENST00000566240 FUT2Q10981 343 aa9.1□□□□□ -0.95
CNOT1-209ENST00000566240 HELBQ8NG08 1087 aaPredicted RBP9.1□□□□□ -0.95
CNOT1-209ENST00000566240 GLMNQ92990 594 aa9.1□□□□□ -0.95
CNOT1-209ENST00000566240 ZBTB7CA1YPR0 619 aa9.09□□□□□ -0.95
CNOT1-209ENST00000566240 RGS20O76081 388 aa9.09□□□□□ -0.95
CNOT1-209ENST00000566240 IRF5Q13568 498 aa9.09□□□□□ -0.95
CNOT1-209ENST00000566240 SAMD7Q7Z3H4 446 aa9.09□□□□□ -0.95
CNOT1-209ENST00000566240 ANKK1Q8NFD2 765 aa9.09□□□□□ -0.95
CNOT1-209ENST00000566240 HMX1Q9NP08 348 aaPredicted RBP9.09□□□□□ -0.95
CNOT1-209ENST00000566240 C6orf229H3BNL8 230 aa9.08□□□□□ -0.96
CNOT1-209ENST00000566240 CFHP08603 1231 aa9.08□□□□□ -0.96
CNOT1-209ENST00000566240 TSC1Q92574 1164 aa9.08□□□□□ -0.96
CNOT1-209ENST00000566240 TRAIPQ9BWF2 469 aa9.08□□□□□ -0.96
CNOT1-209ENST00000566240 TRIM34Q9BYJ4 488 aa9.08□□□□□ -0.96
CNOT1-209ENST00000566240 CFAP99D6REC4 459 aa9.07□□□□□ -0.96
CNOT1-209ENST00000566240 ATP6V1AP38606 617 aa9.07□□□□□ -0.96
CNOT1-209ENST00000566240 BCAMP50895 628 aa9.07□□□□□ -0.96
CNOT1-209ENST00000566240 WASHC4Q2M389 1173 aa9.07□□□□□ -0.96
CNOT1-209ENST00000566240 LAPTM4BQ86VI4 370 aa9.07□□□□□ -0.96
CNOT1-209ENST00000566240 LRRN4Q8WUT4 740 aa9.07□□□□□ -0.96
CNOT1-209ENST00000566240 PPP1R15AO75807 674 aaPredicted RBP9.06□□□□□ -0.96
CNOT1-209ENST00000566240 HDGFL1Q5TGJ6 251 aa9.06□□□□□ -0.96
CNOT1-209ENST00000566240 NECTIN2Q92692 538 aa9.06□□□□□ -0.96
CNOT1-209ENST00000566240 IRX2Q9BZI1 471 aaPredicted RBP9.05□□□□□ -0.96
CNOT1-209ENST00000566240 GPR37L1O60883 481 aa9.04□□□□□ -0.96
CNOT1-209ENST00000566240 RNF40O75150 1001 aa9.04□□□□□ -0.96
CNOT1-209ENST00000566240 ITGBL1O95965 494 aaPredicted RBP9.04□□□□□ -0.96
CNOT1-209ENST00000566240 SYMPKQ92797 1274 aaKnown RBP9.04□□□□□ -0.96
CNOT1-209ENST00000566240 ACIN1Q9UKV3 1341 aaKnown RBP9.04□□□□□ -0.96
CNOT1-209ENST00000566240 KMT5BQ4FZB7 885 aa9.03□□□□□ -0.96
CNOT1-209ENST00000566240 RETREG2Q8NC44 543 aa9.03□□□□□ -0.96
CNOT1-209ENST00000566240 PRR7Q8TB68 274 aa9.03□□□□□ -0.96
CNOT1-209ENST00000566240 SOWAHBA6NEL2 793 aa9.02□□□□□ -0.97
CNOT1-209ENST00000566240 VAC14Q08AM6 782 aa9.02□□□□□ -0.97
CNOT1-209ENST00000566240 ADAMTS19Q8TE59 1207 aa9.02□□□□□ -0.97
CNOT1-209ENST00000566240 EPS8L1Q8TE68 723 aa9.02□□□□□ -0.97
CNOT1-209ENST00000566240 ZFRQ96KR1 1074 aaKnown RBP9.02□□□□□ -0.97
CNOT1-209ENST00000566240 KCTD17Q8N5Z5 321 aa9.01□□□□□ -0.97
CNOT1-209ENST00000566240 ACTN4O43707 911 aaKnown RBP8.99□□□□□ -0.97
CNOT1-209ENST00000566240 NR6A1Q15406 480 aa8.99□□□□□ -0.97
CNOT1-209ENST00000566240 MORN1Q5T089 497 aa8.99□□□□□ -0.97
CNOT1-209ENST00000566240 RETREG3Q86VR2 466 aa8.99□□□□□ -0.97
CNOT1-209ENST00000566240 ALG2Q9H553 416 aa8.99□□□□□ -0.97
CNOT1-209ENST00000566240 WBP1LQ9NX94 342 aa8.99□□□□□ -0.97
CNOT1-209ENST00000566240 PER1O15534 1290 aaPredicted RBP8.98□□□□□ -0.97
CNOT1-209ENST00000566240 Q3C1V9 767 aa8.98□□□□□ -0.97
CNOT1-209ENST00000566240 PUS10Q3MIT2 529 aaKnown RBP8.98□□□□□ -0.97
CNOT1-209ENST00000566240 SLC27A5Q9Y2P5 690 aa8.98□□□□□ -0.97
CNOT1-209ENST00000566240 RFX1P22670 979 aa8.97□□□□□ -0.97
CNOT1-209ENST00000566240 DESI1Q6ICB0 168 aa8.97□□□□□ -0.97
CNOT1-209ENST00000566240 AEBP1Q8IUX7 1158 aa8.97□□□□□ -0.97
CNOT1-209ENST00000566240 PBXIP1Q96AQ6 731 aa8.97□□□□□ -0.97
CNOT1-209ENST00000566240 LRCH3Q96II8 777 aa8.97□□□□□ -0.97
CNOT1-209ENST00000566240 PDE4CQ08493 712 aa8.96□□□□□ -0.98
CNOT1-209ENST00000566240 CFAP70Q5T0N1 1121 aa8.96□□□□□ -0.98
CNOT1-209ENST00000566240 NYAP1Q6ZVC0 841 aa8.96□□□□□ -0.98
CNOT1-209ENST00000566240 PPP1R12CQ9BZL4 782 aa8.96□□□□□ -0.98
CNOT1-209ENST00000566240 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.96□□□□□ -0.98
CNOT1-209ENST00000566240 SOX11P35716 441 aa8.95□□□□□ -0.98
CNOT1-209ENST00000566240 PRR14Q9BWN1 585 aa8.95□□□□□ -0.98
CNOT1-209ENST00000566240 LYPD8Q6UX82 237 aa8.94□□□□□ -0.98
CNOT1-209ENST00000566240 PNMA1Q8ND90 353 aa8.94□□□□□ -0.98
CNOT1-209ENST00000566240 CCDC9Q9Y3X0 531 aaKnown RBP8.94□□□□□ -0.98
CNOT1-209ENST00000566240 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.93□□□□□ -0.98
CNOT1-209ENST00000566240 PALM3A6NDB9 673 aaPredicted RBP8.93□□□□□ -0.98
CNOT1-209ENST00000566240 SRPK2P78362 688 aaKnown RBP8.93□□□□□ -0.98
CNOT1-209ENST00000566240 HPS5Q9UPZ3 1129 aa8.93□□□□□ -0.98
CNOT1-209ENST00000566240 KCNC4Q03721 635 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms