RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 CC2D1BQ5T0F9 858 aaKnown RBP26.57■■□□□ 1.84
CLN6-205ENST00000564846 KNDC1Q76NI1 1749 aa26.55■■□□□ 1.84
CLN6-205ENST00000564846 MED14O60244 1454 aa26.55■■□□□ 1.84
CLN6-205ENST00000564846 FAM135BQ49AJ0 1406 aa26.55■■□□□ 1.84
CLN6-205ENST00000564846 MINK1Q8N4C8 1332 aaPredicted RBP26.55■■□□□ 1.84
CLN6-205ENST00000564846 NLRP13Q86W25 1043 aa26.55■■□□□ 1.84
CLN6-205ENST00000564846 NINLQ9Y2I6 1382 aa26.54■■□□□ 1.84
CLN6-205ENST00000564846 TMC1Q8TDI8 760 aa26.54■■□□□ 1.84
CLN6-205ENST00000564846 ATAD2Q6PL18 1390 aa26.52■■□□□ 1.84
CLN6-205ENST00000564846 SLC12A5Q9H2X9 1139 aa26.52■■□□□ 1.84
CLN6-205ENST00000564846 CABP2Q9NPB3 220 aa26.52■■□□□ 1.84
CLN6-205ENST00000564846 ZNF142P52746 1687 aaPredicted RBP26.51■■□□□ 1.83
CLN6-205ENST00000564846 SRPK2P78362 688 aaKnown RBP26.51■■□□□ 1.83
CLN6-205ENST00000564846 FAM9BQ8IZU0 186 aa26.51■■□□□ 1.83
CLN6-205ENST00000564846 CPS1P31327 1500 aa26.51■■□□□ 1.83
CLN6-205ENST00000564846 WAPLQ7Z5K2 1190 aa26.51■■□□□ 1.83
CLN6-205ENST00000564846 CARD14Q9BXL6 1004 aa26.51■■□□□ 1.83
CLN6-205ENST00000564846 TBX22Q9Y458 520 aa26.5■■□□□ 1.83
CLN6-205ENST00000564846 PLEKHH1Q9ULM0 1364 aa26.49■■□□□ 1.83
CLN6-205ENST00000564846 DIP2AQ14689 1571 aa26.49■■□□□ 1.83
CLN6-205ENST00000564846 SETD1BQ9UPS6 1966 aaKnown RBP26.48■■□□□ 1.83
CLN6-205ENST00000564846 PNISRQ8TF01 805 aaKnown RBP26.47■■□□□ 1.83
CLN6-205ENST00000564846 CDK19Q9BWU1 502 aa26.47■■□□□ 1.83
CLN6-205ENST00000564846 ANKRD36BQ8N2N9 1353 aa26.47■■□□□ 1.83
CLN6-205ENST00000564846 HNRNPUQ00839 825 aaKnown RBP eCLIP26.46■■□□□ 1.83
CLN6-205ENST00000564846 SLC26A8Q96RN1 970 aa26.46■■□□□ 1.83
CLN6-205ENST00000564846 NSD3Q9BZ95 1437 aa26.45■■□□□ 1.82
CLN6-205ENST00000564846 ANKLE2Q86XL3 938 aa26.42■■□□□ 1.82
CLN6-205ENST00000564846 USP32Q8NFA0 1604 aa26.41■■□□□ 1.82
CLN6-205ENST00000564846 ROBO2Q9HCK4 1378 aa26.41■■□□□ 1.82
CLN6-205ENST00000564846 PTPRUQ92729 1446 aa26.4■■□□□ 1.82
CLN6-205ENST00000564846 WASLO00401 505 aaPredicted RBP26.39■■□□□ 1.82
CLN6-205ENST00000564846 PPP2R1AP30153 589 aa26.39■■□□□ 1.82
CLN6-205ENST00000564846 TERF2IPQ9NYB0 399 aa26.38■■□□□ 1.81
CLN6-205ENST00000564846 CGNL1Q0VF96 1302 aa26.38■■□□□ 1.81
CLN6-205ENST00000564846 PIK3R4Q99570 1358 aa26.38■■□□□ 1.81
CLN6-205ENST00000564846 PTCH1Q13635 1447 aa26.36■■□□□ 1.81
CLN6-205ENST00000564846 AMOTL2Q9Y2J4 779 aa26.36■■□□□ 1.81
CLN6-205ENST00000564846 A0A1W2PP64 1363 aa26.36■■□□□ 1.81
CLN6-205ENST00000564846 NSD2O96028 1365 aa26.35■■□□□ 1.81
CLN6-205ENST00000564846 ADGRB2O60241 1585 aa26.33■■□□□ 1.81
CLN6-205ENST00000564846 CD163L1Q9NR16 1453 aa26.33■■□□□ 1.81
CLN6-205ENST00000564846 HDGFL2Q7Z4V5 671 aaPredicted RBP26.33■■□□□ 1.8
CLN6-205ENST00000564846 CABP1Q9NZU7 370 aa26.32■■□□□ 1.8
CLN6-205ENST00000564846 ZBED9Q6R2W3 1325 aa26.31■■□□□ 1.8
CLN6-205ENST00000564846 ATP7BP35670 1465 aa26.31■■□□□ 1.8
CLN6-205ENST00000564846 INSRP06213 1382 aa26.3■■□□□ 1.8
CLN6-205ENST00000564846 SCAF1Q9H7N4 1312 aaKnown RBP26.29■■□□□ 1.8
CLN6-205ENST00000564846 XRN1Q8IZH2 1706 aaKnown RBP26.29■■□□□ 1.8
CLN6-205ENST00000564846 MORC1Q86VD1 984 aa26.29■■□□□ 1.8
CLN6-205ENST00000564846 GTF3C3Q9Y5Q9 886 aa26.28■■□□□ 1.8
CLN6-205ENST00000564846 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.28■■□□□ 1.8
CLN6-205ENST00000564846 NUDT16Q96DE0 195 aaKnown RBP26.27■■□□□ 1.8
CLN6-205ENST00000564846 CCDC61Q9Y6R9 512 aa26.26■■□□□ 1.79
CLN6-205ENST00000564846 PPIP5K1Q6PFW1 1433 aa26.25■■□□□ 1.79
CLN6-205ENST00000564846 NPHP4O75161 1426 aaPredicted RBP26.23■■□□□ 1.79
CLN6-205ENST00000564846 CPSF1Q10570 1443 aaKnown RBP26.22■■□□□ 1.79
CLN6-205ENST00000564846 KCNA6P17658 529 aa26.21■■□□□ 1.79
CLN6-205ENST00000564846 POLR3AO14802 1390 aaPredicted RBP26.18■■□□□ 1.78
CLN6-205ENST00000564846 PRR36Q9H6K5 1346 aa26.18■■□□□ 1.78
CLN6-205ENST00000564846 WDR43Q15061 677 aaKnown RBP eCLIP26.18■■□□□ 1.78
CLN6-205ENST00000564846 CDC42BPGQ6DT37 1551 aa26.18■■□□□ 1.78
CLN6-205ENST00000564846 FYB1O15117 783 aa26.18■■□□□ 1.78
CLN6-205ENST00000564846 BLMP54132 1417 aaPredicted RBP26.17■■□□□ 1.78
CLN6-205ENST00000564846 CHD2O14647 1828 aaKnown RBP26.17■■□□□ 1.78
CLN6-205ENST00000564846 EDC4Q6P2E9 1401 aaKnown RBP26.16■■□□□ 1.78
CLN6-205ENST00000564846 ZNF692Q9BU19 519 aaPredicted RBP26.15■■□□□ 1.78
CLN6-205ENST00000564846 NCKAP5LQ9HCH0 1330 aa26.14■■□□□ 1.78
CLN6-205ENST00000564846 TNNT2P45379 298 aaPredicted RBP26.14■■□□□ 1.78
CLN6-205ENST00000564846 GGNBP2Q9H3C7 697 aa26.14■■□□□ 1.78
CLN6-205ENST00000564846 ANKRD26Q9UPS8 1709 aa26.14■■□□□ 1.77
CLN6-205ENST00000564846 ADAMTS8Q9UP79 889 aa26.13■■□□□ 1.77
CLN6-205ENST00000564846 TOPAZ1Q8N9V7 1692 aa26.13■■□□□ 1.77
CLN6-205ENST00000564846 PLEKHG3A1L390 1219 aa26.12■■□□□ 1.77
CLN6-205ENST00000564846 KIF20BQ96Q89 1820 aa26.11■■□□□ 1.77
CLN6-205ENST00000564846 MON2Q7Z3U7 1717 aa26.09■■□□□ 1.77
CLN6-205ENST00000564846 MTHFSP49914 203 aa26.09■■□□□ 1.77
CLN6-205ENST00000564846 CFAP53Q96M91 514 aa26.09■■□□□ 1.77
CLN6-205ENST00000564846 AKAP12Q02952 1782 aa26.09■■□□□ 1.77
CLN6-205ENST00000564846 ITSN1Q15811 1721 aa26.08■■□□□ 1.77
CLN6-205ENST00000564846 KDM4FA0A1W2PPD8 638 aa26.08■■□□□ 1.77
CLN6-205ENST00000564846 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.08■■□□□ 1.77
CLN6-205ENST00000564846 ANKARQ7Z5J8 1434 aa26.08■■□□□ 1.77
CLN6-205ENST00000564846 NUTM2FA1L443 756 aa26.06■■□□□ 1.76
CLN6-205ENST00000564846 ACEP12821 1306 aa26.05■■□□□ 1.76
CLN6-205ENST00000564846 NWD1Q149M9 1564 aa26.04■■□□□ 1.76
CLN6-205ENST00000564846 NKTRP30414 1462 aaKnown RBP26.03■■□□□ 1.76
CLN6-205ENST00000564846 SMG6Q86US8 1419 aaKnown RBP26.02■■□□□ 1.76
CLN6-205ENST00000564846 USP6P35125 1406 aa26.01■■□□□ 1.75
CLN6-205ENST00000564846 FMN2Q9NZ56 1722 aa26.01■■□□□ 1.75
CLN6-205ENST00000564846 ADGRL3Q9HAR2 1447 aa26■■□□□ 1.75
CLN6-205ENST00000564846 PDE3BQ13370 1112 aa26■■□□□ 1.75
CLN6-205ENST00000564846 NME9Q86XW9 330 aa26■■□□□ 1.75
CLN6-205ENST00000564846 NALCNQ8IZF0 1738 aa25.99■■□□□ 1.75
CLN6-205ENST00000564846 SENP3-EIF4A1A0A087X0R7 540 aa25.99■■□□□ 1.75
CLN6-205ENST00000564846 NRKQ7Z2Y5 1582 aa25.99■■□□□ 1.75
CLN6-205ENST00000564846 SHPRHQ149N8 1683 aa25.98■■□□□ 1.75
CLN6-205ENST00000564846 TTC21BQ7Z4L5 1316 aa25.98■■□□□ 1.75
CLN6-205ENST00000564846 COG3Q96JB2 828 aa25.97■■□□□ 1.75
CLN6-205ENST00000564846 NUDCQ9Y266 331 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms