RNA–Protein interactions for RNA: ENST00000564648.1

COX4I1-207, Transcript of cytochrome c oxidase subunit 4I1, humanhuman

TSL 5

Gene COX4I1, Length 1,235 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1-207ENST00000564648 ROCK2O75116 1388 aaKnown RBP12.39□□□□□ -0.43
COX4I1-207ENST00000564648 USP47Q96K76 1375 aa12.39□□□□□ -0.43
COX4I1-207ENST00000564648 NLRP1Q9C000 1473 aa12.39□□□□□ -0.43
COX4I1-207ENST00000564648 PPLO60437 1756 aa12.38□□□□□ -0.43
COX4I1-207ENST00000564648 CARD11Q9BXL7 1154 aa12.38□□□□□ -0.43
COX4I1-207ENST00000564648 THEMISQ8N1K5 641 aaPredicted RBP12.37□□□□□ -0.43
COX4I1-207ENST00000564648 ZFYVE9O95405 1425 aa12.37□□□□□ -0.43
COX4I1-207ENST00000564648 C11orf95C9JLR9 678 aaPredicted RBP12.36□□□□□ -0.43
COX4I1-207ENST00000564648 PIK3C2GO75747 1445 aa12.36□□□□□ -0.43
COX4I1-207ENST00000564648 SETD1AO15047 1707 aaKnown RBP12.35□□□□□ -0.43
COX4I1-207ENST00000564648 KIAA1210Q9ULL0 1709 aa12.35□□□□□ -0.43
COX4I1-207ENST00000564648 POTEAQ6S8J7 498 aa12.35□□□□□ -0.43
COX4I1-207ENST00000564648 WASHC2AQ641Q2 1341 aa12.35□□□□□ -0.43
COX4I1-207ENST00000564648 CFAP70Q5T0N1 1121 aa12.34□□□□□ -0.43
COX4I1-207ENST00000564648 XIRP1Q702N8 1843 aaKnown RBP12.33□□□□□ -0.44
COX4I1-207ENST00000564648 MYO5BQ9ULV0 1848 aa12.33□□□□□ -0.44
COX4I1-207ENST00000564648 PRR29P0C7W0 189 aa12.33□□□□□ -0.44
COX4I1-207ENST00000564648 C14orf93Q9H972 538 aaKnown RBP12.33□□□□□ -0.44
COX4I1-207ENST00000564648 CCDC7Q96M83 1385 aa12.32□□□□□ -0.44
COX4I1-207ENST00000564648 ST20-MTHFSA0A0A6YYL1 179 aa12.32□□□□□ -0.44
COX4I1-207ENST00000564648 VGFO15240 615 aaPredicted RBP12.32□□□□□ -0.44
COX4I1-207ENST00000564648 NUTM2DQ5VT03 806 aaPredicted RBP12.31□□□□□ -0.44
COX4I1-207ENST00000564648 SCAF11Q99590 1463 aaKnown RBP12.31□□□□□ -0.44
COX4I1-207ENST00000564648 ADGRB1O14514 1584 aa12.3□□□□□ -0.44
COX4I1-207ENST00000564648 SETBP1Q9Y6X0 1596 aa12.3□□□□□ -0.44
COX4I1-207ENST00000564648 RIMS2Q9UQ26 1411 aa12.3□□□□□ -0.44
COX4I1-207ENST00000564648 DDX10Q13206 875 aaKnown RBP12.3□□□□□ -0.44
COX4I1-207ENST00000564648 TESK2Q96S53 571 aa12.3□□□□□ -0.44
COX4I1-207ENST00000564648 KIF7Q2M1P5 1343 aa12.3□□□□□ -0.44
COX4I1-207ENST00000564648 FAM135BQ49AJ0 1406 aa12.29□□□□□ -0.44
COX4I1-207ENST00000564648 KDM5AP29375 1690 aaKnown RBP12.29□□□□□ -0.44
COX4I1-207ENST00000564648 ZBTB47Q9UFB7 747 aaPredicted RBP12.29□□□□□ -0.44
COX4I1-207ENST00000564648 UBR1Q8IWV7 1749 aa12.28□□□□□ -0.44
COX4I1-207ENST00000564648 ASXL1Q8IXJ9 1541 aa12.27□□□□□ -0.44
COX4I1-207ENST00000564648 TMEM2Q9UHN6 1383 aa12.27□□□□□ -0.45
COX4I1-207ENST00000564648 ROBO1Q9Y6N7 1651 aa12.26□□□□□ -0.45
COX4I1-207ENST00000564648 PITPNM1O00562 1244 aa12.26□□□□□ -0.45
COX4I1-207ENST00000564648 ARHGAP23Q9P227 1491 aa12.25□□□□□ -0.45
COX4I1-207ENST00000564648 TMEM132EQ6IEE7 984 aa12.24□□□□□ -0.45
COX4I1-207ENST00000564648 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.24□□□□□ -0.45
COX4I1-207ENST00000564648 NRXN3Q9Y4C0 1643 aa12.23□□□□□ -0.45
COX4I1-207ENST00000564648 SLIT1O75093 1534 aa12.23□□□□□ -0.45
COX4I1-207ENST00000564648 CIZ1Q9ULV3 898 aaPredicted RBP12.23□□□□□ -0.45
COX4I1-207ENST00000564648 EIF3AQ14152 1382 aaKnown RBP12.22□□□□□ -0.45
COX4I1-207ENST00000564648 LTKP29376 864 aa12.22□□□□□ -0.45
COX4I1-207ENST00000564648 TMEM94Q12767 1356 aa12.2□□□□□ -0.46
COX4I1-207ENST00000564648 SBNO2Q9Y2G9 1366 aa12.2□□□□□ -0.46
COX4I1-207ENST00000564648 ECM2O94769 699 aaPredicted RBP12.2□□□□□ -0.46
COX4I1-207ENST00000564648 UPF1Q92900 1129 aaKnown RBP eCLIP12.2□□□□□ -0.46
COX4I1-207ENST00000564648 CREBZFQ9NS37 354 aa12.2□□□□□ -0.46
COX4I1-207ENST00000564648 ADAMTS13Q76LX8 1427 aa12.2□□□□□ -0.46
COX4I1-207ENST00000564648 PLEKHG1Q9ULL1 1385 aa12.19□□□□□ -0.46
COX4I1-207ENST00000564648 HDGFP51858 240 aaKnown RBP12.19□□□□□ -0.46
COX4I1-207ENST00000564648 TRAK1Q9UPV9 953 aa12.19□□□□□ -0.46
COX4I1-207ENST00000564648 PHLPP1O60346 1717 aa12.19□□□□□ -0.46
COX4I1-207ENST00000564648 YTHDC2Q9H6S0 1430 aaKnown RBP12.19□□□□□ -0.46
COX4I1-207ENST00000564648 CENPJQ9HC77 1338 aaPredicted RBP12.18□□□□□ -0.46
COX4I1-207ENST00000564648 TMF1P82094 1093 aa12.18□□□□□ -0.46
COX4I1-207ENST00000564648 TXNDC2Q86VQ3 553 aa12.18□□□□□ -0.46
COX4I1-207ENST00000564648 LRPPRCP42704 1394 aaKnown RBP12.18□□□□□ -0.46
COX4I1-207ENST00000564648 ARHGEF28Q8N1W1 1705 aaKnown RBP12.17□□□□□ -0.46
COX4I1-207ENST00000564648 METP08581 1390 aa12.17□□□□□ -0.46
COX4I1-207ENST00000564648 JCADQ9P266 1359 aa12.17□□□□□ -0.46
COX4I1-207ENST00000564648 ABCC11Q96J66 1382 aa12.16□□□□□ -0.46
COX4I1-207ENST00000564648 DLC1Q96QB1 1528 aa12.16□□□□□ -0.46
COX4I1-207ENST00000564648 LRP6O75581 1613 aa12.15□□□□□ -0.46
COX4I1-207ENST00000564648 COL16A1Q07092 1604 aaPredicted RBP12.15□□□□□ -0.46
COX4I1-207ENST00000564648 NWD1Q149M9 1564 aa12.15□□□□□ -0.46
COX4I1-207ENST00000564648 NKTRP30414 1462 aaKnown RBP12.14□□□□□ -0.47
COX4I1-207ENST00000564648 SLC24A1O60721 1099 aa12.14□□□□□ -0.47
COX4I1-207ENST00000564648 POLR3GLQ9BT43 218 aa12.14□□□□□ -0.47
COX4I1-207ENST00000564648 STK26Q9P289 416 aa12.14□□□□□ -0.47
COX4I1-207ENST00000564648 EID1Q9Y6B2 187 aa12.14□□□□□ -0.47
COX4I1-207ENST00000564648 QRICH2Q9H0J4 1663 aa12.13□□□□□ -0.47
COX4I1-207ENST00000564648 SRCAPQ6ZRS2 3230 aa12.13□□□□□ -0.47
COX4I1-207ENST00000564648 TECPR2O15040 1411 aa12.13□□□□□ -0.47
COX4I1-207ENST00000564648 KCNA6P17658 529 aa12.13□□□□□ -0.47
COX4I1-207ENST00000564648 RBM33Q96EV2 1170 aaKnown RBP12.13□□□□□ -0.47
COX4I1-207ENST00000564648 TULP4Q9NRJ4 1543 aa12.12□□□□□ -0.47
COX4I1-207ENST00000564648 CDCA8Q53HL2 280 aa12.12□□□□□ -0.47
COX4I1-207ENST00000564648 PROSER2Q86WR7 435 aaPredicted RBP12.12□□□□□ -0.47
COX4I1-207ENST00000564648 SIRT1Q96EB6 747 aa12.12□□□□□ -0.47
COX4I1-207ENST00000564648 PTPRUQ92729 1446 aa12.11□□□□□ -0.47
COX4I1-207ENST00000564648 MSH6P52701 1360 aa12.11□□□□□ -0.47
COX4I1-207ENST00000564648 PLEKHH1Q9ULM0 1364 aa12.11□□□□□ -0.47
COX4I1-207ENST00000564648 PER1O15534 1290 aaPredicted RBP12.11□□□□□ -0.47
COX4I1-207ENST00000564648 ANP32CO43423 234 aa12.11□□□□□ -0.47
COX4I1-207ENST00000564648 ZNF772Q68DY9 489 aaPredicted RBP12.11□□□□□ -0.47
COX4I1-207ENST00000564648 PRAM1Q96QH2 718 aa12.11□□□□□ -0.47
COX4I1-207ENST00000564648 TBX22Q9Y458 520 aa12.11□□□□□ -0.47
COX4I1-207ENST00000564648 SPATA31A6Q5VVP1 1343 aa12.11□□□□□ -0.47
COX4I1-207ENST00000564648 CDK12Q9NYV4 1490 aaPredicted RBP12.1□□□□□ -0.47
COX4I1-207ENST00000564648 DCAF8Q5TAQ9 597 aa12.1□□□□□ -0.47
COX4I1-207ENST00000564648 PUS7Q96PZ0 661 aaKnown RBP12.1□□□□□ -0.47
COX4I1-207ENST00000564648 KNDC1Q76NI1 1749 aa12.1□□□□□ -0.47
COX4I1-207ENST00000564648 MYOM1P52179 1685 aa12.1□□□□□ -0.47
COX4I1-207ENST00000564648 SHPRHQ149N8 1683 aa12.1□□□□□ -0.47
COX4I1-207ENST00000564648 DIP2AQ14689 1571 aa12.09□□□□□ -0.47
COX4I1-207ENST00000564648 CCER2I3L3R5 266 aa12.09□□□□□ -0.47
COX4I1-207ENST00000564648 CHADLQ6NUI6 762 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms