RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 BRD4O60885 1362 aaPredicted RBP21.13■□□□□ 0.97
COMMD4-210ENST00000564587 ZNF142P52746 1687 aaPredicted RBP21.13■□□□□ 0.97
COMMD4-210ENST00000564587 PLPPR3Q6T4P5 718 aa21.13■□□□□ 0.97
COMMD4-210ENST00000564587 DIP2AQ14689 1571 aa21.13■□□□□ 0.97
COMMD4-210ENST00000564587 ADAMTS13Q76LX8 1427 aa21.12■□□□□ 0.97
COMMD4-210ENST00000564587 LTKP29376 864 aa21.12■□□□□ 0.97
COMMD4-210ENST00000564587 CERKQ8TCT0 537 aa21.12■□□□□ 0.97
COMMD4-210ENST00000564587 TULP4Q9NRJ4 1543 aa21.12■□□□□ 0.97
COMMD4-210ENST00000564587 ATAD2Q6PL18 1390 aa21.11■□□□□ 0.97
COMMD4-210ENST00000564587 HSPA2P54652 639 aa21.11■□□□□ 0.97
COMMD4-210ENST00000564587 TBX22Q9Y458 520 aa21.11■□□□□ 0.97
COMMD4-210ENST00000564587 MED14O60244 1454 aa21.11■□□□□ 0.97
COMMD4-210ENST00000564587 METP08581 1390 aa21.1■□□□□ 0.97
COMMD4-210ENST00000564587 NLRP13Q86W25 1043 aa21.1■□□□□ 0.97
COMMD4-210ENST00000564587 CPS1P31327 1500 aa21.09■□□□□ 0.97
COMMD4-210ENST00000564587 TMC1Q8TDI8 760 aa21.08■□□□□ 0.97
COMMD4-210ENST00000564587 SENP3Q9H4L4 574 aaPredicted RBP21.08■□□□□ 0.97
COMMD4-210ENST00000564587 AMER1Q5JTC6 1135 aaPredicted RBP21.07■□□□□ 0.96
COMMD4-210ENST00000564587 SRPK2P78362 688 aaKnown RBP21.06■□□□□ 0.96
COMMD4-210ENST00000564587 SAFB2Q14151 953 aaKnown RBP eCLIP21.06■□□□□ 0.96
COMMD4-210ENST00000564587 MINK1Q8N4C8 1332 aaPredicted RBP21.05■□□□□ 0.96
COMMD4-210ENST00000564587 CC2D1BQ5T0F9 858 aaKnown RBP21.05■□□□□ 0.96
COMMD4-210ENST00000564587 CCDC184Q52MB2 194 aa21.04■□□□□ 0.96
COMMD4-210ENST00000564587 ANKLE2Q86XL3 938 aa21.04■□□□□ 0.96
COMMD4-210ENST00000564587 ANKRD36BQ8N2N9 1353 aa21.04■□□□□ 0.96
COMMD4-210ENST00000564587 PIK3R4Q99570 1358 aa21.04■□□□□ 0.96
COMMD4-210ENST00000564587 CNGB1Q14028 1251 aaPredicted RBP21.03■□□□□ 0.96
COMMD4-210ENST00000564587 USP32Q8NFA0 1604 aa21.03■□□□□ 0.96
COMMD4-210ENST00000564587 CDK19Q9BWU1 502 aa21.02■□□□□ 0.96
COMMD4-210ENST00000564587 SLC12A5Q9H2X9 1139 aa21.02■□□□□ 0.96
COMMD4-210ENST00000564587 CABP2Q9NPB3 220 aa21.02■□□□□ 0.96
COMMD4-210ENST00000564587 TERF2IPQ9NYB0 399 aa21.01■□□□□ 0.95
COMMD4-210ENST00000564587 WAPLQ7Z5K2 1190 aa21■□□□□ 0.95
COMMD4-210ENST00000564587 FAM9BQ8IZU0 186 aa21■□□□□ 0.95
COMMD4-210ENST00000564587 NSD2O96028 1365 aa20.99■□□□□ 0.95
COMMD4-210ENST00000564587 PNISRQ8TF01 805 aaKnown RBP20.99■□□□□ 0.95
COMMD4-210ENST00000564587 CARD14Q9BXL6 1004 aa20.99■□□□□ 0.95
COMMD4-210ENST00000564587 PLEKHH1Q9ULM0 1364 aa20.98■□□□□ 0.95
COMMD4-210ENST00000564587 PTCH1Q13635 1447 aa20.98■□□□□ 0.95
COMMD4-210ENST00000564587 NSD3Q9BZ95 1437 aa20.98■□□□□ 0.95
COMMD4-210ENST00000564587 WASLO00401 505 aaPredicted RBP20.98■□□□□ 0.95
COMMD4-210ENST00000564587 CGNL1Q0VF96 1302 aa20.98■□□□□ 0.95
COMMD4-210ENST00000564587 SLC26A8Q96RN1 970 aa20.97■□□□□ 0.95
COMMD4-210ENST00000564587 INSRP06213 1382 aa20.97■□□□□ 0.95
COMMD4-210ENST00000564587 HNRNPUQ00839 825 aaKnown RBP eCLIP20.96■□□□□ 0.95
COMMD4-210ENST00000564587 HDGFL2Q7Z4V5 671 aaPredicted RBP20.96■□□□□ 0.95
COMMD4-210ENST00000564587 ADGRB2O60241 1585 aa20.96■□□□□ 0.95
COMMD4-210ENST00000564587 ROBO2Q9HCK4 1378 aa20.96■□□□□ 0.95
COMMD4-210ENST00000564587 AMOTL2Q9Y2J4 779 aa20.95■□□□□ 0.94
COMMD4-210ENST00000564587 PPP2R1AP30153 589 aa20.94■□□□□ 0.94
COMMD4-210ENST00000564587 PTPRUQ92729 1446 aa20.94■□□□□ 0.94
COMMD4-210ENST00000564587 ATP7BP35670 1465 aa20.94■□□□□ 0.94
COMMD4-210ENST00000564587 XRN1Q8IZH2 1706 aaKnown RBP20.92■□□□□ 0.94
COMMD4-210ENST00000564587 A0A1W2PP64 1363 aa20.9■□□□□ 0.94
COMMD4-210ENST00000564587 ZBED9Q6R2W3 1325 aa20.89■□□□□ 0.93
COMMD4-210ENST00000564587 MORC1Q86VD1 984 aa20.89■□□□□ 0.93
COMMD4-210ENST00000564587 CCDC61Q9Y6R9 512 aa20.89■□□□□ 0.93
COMMD4-210ENST00000564587 CABP1Q9NZU7 370 aa20.88■□□□□ 0.93
COMMD4-210ENST00000564587 NPHP4O75161 1426 aaPredicted RBP20.87■□□□□ 0.93
COMMD4-210ENST00000564587 NUDT16Q96DE0 195 aaKnown RBP20.87■□□□□ 0.93
COMMD4-210ENST00000564587 CD163L1Q9NR16 1453 aa20.87■□□□□ 0.93
COMMD4-210ENST00000564587 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.87■□□□□ 0.93
COMMD4-210ENST00000564587 CHD2O14647 1828 aaKnown RBP20.85■□□□□ 0.93
COMMD4-210ENST00000564587 ZNF692Q9BU19 519 aaPredicted RBP20.85■□□□□ 0.93
COMMD4-210ENST00000564587 PPIP5K1Q6PFW1 1433 aa20.85■□□□□ 0.93
COMMD4-210ENST00000564587 CPSF1Q10570 1443 aaKnown RBP20.83■□□□□ 0.93
COMMD4-210ENST00000564587 CDC42BPGQ6DT37 1551 aa20.82■□□□□ 0.92
COMMD4-210ENST00000564587 POLR3AO14802 1390 aaPredicted RBP20.82■□□□□ 0.92
COMMD4-210ENST00000564587 ANKRD26Q9UPS8 1709 aa20.81■□□□□ 0.92
COMMD4-210ENST00000564587 EDC4Q6P2E9 1401 aaKnown RBP20.81■□□□□ 0.92
COMMD4-210ENST00000564587 WDR43Q15061 677 aaKnown RBP eCLIP20.81■□□□□ 0.92
COMMD4-210ENST00000564587 KCNA6P17658 529 aa20.8■□□□□ 0.92
COMMD4-210ENST00000564587 PLEKHG3A1L390 1219 aa20.79■□□□□ 0.92
COMMD4-210ENST00000564587 ANKARQ7Z5J8 1434 aa20.78■□□□□ 0.92
COMMD4-210ENST00000564587 ITSN1Q15811 1721 aa20.78■□□□□ 0.92
COMMD4-210ENST00000564587 KIF20BQ96Q89 1820 aa20.78■□□□□ 0.92
COMMD4-210ENST00000564587 CFAP53Q96M91 514 aa20.78■□□□□ 0.92
COMMD4-210ENST00000564587 BLMP54132 1417 aaPredicted RBP20.78■□□□□ 0.92
COMMD4-210ENST00000564587 AKAP12Q02952 1782 aa20.77■□□□□ 0.92
COMMD4-210ENST00000564587 TOPAZ1Q8N9V7 1692 aa20.77■□□□□ 0.92
COMMD4-210ENST00000564587 FYB1O15117 783 aa20.77■□□□□ 0.92
COMMD4-210ENST00000564587 MON2Q7Z3U7 1717 aa20.76■□□□□ 0.91
COMMD4-210ENST00000564587 GTF3C3Q9Y5Q9 886 aa20.76■□□□□ 0.91
COMMD4-210ENST00000564587 PRR36Q9H6K5 1346 aa20.76■□□□□ 0.91
COMMD4-210ENST00000564587 SCAF1Q9H7N4 1312 aaKnown RBP20.75■□□□□ 0.91
COMMD4-210ENST00000564587 NCKAP5LQ9HCH0 1330 aa20.75■□□□□ 0.91
COMMD4-210ENST00000564587 NWD1Q149M9 1564 aa20.74■□□□□ 0.91
COMMD4-210ENST00000564587 GGNBP2Q9H3C7 697 aa20.72■□□□□ 0.91
COMMD4-210ENST00000564587 DMRT2Q9Y5R5 561 aa20.72■□□□□ 0.91
COMMD4-210ENST00000564587 PDE3BQ13370 1112 aa20.71■□□□□ 0.91
COMMD4-210ENST00000564587 NGEFQ8N5V2 710 aa20.71■□□□□ 0.91
COMMD4-210ENST00000564587 ADAMTS8Q9UP79 889 aa20.71■□□□□ 0.91
COMMD4-210ENST00000564587 FMN2Q9NZ56 1722 aa20.7■□□□□ 0.9
COMMD4-210ENST00000564587 MTHFSP49914 203 aa20.7■□□□□ 0.9
COMMD4-210ENST00000564587 ADGRL3Q9HAR2 1447 aa20.7■□□□□ 0.9
COMMD4-210ENST00000564587 NKTRP30414 1462 aaKnown RBP20.69■□□□□ 0.9
COMMD4-210ENST00000564587 ACEP12821 1306 aa20.69■□□□□ 0.9
COMMD4-210ENST00000564587 TNNT2P45379 298 aaPredicted RBP20.68■□□□□ 0.9
COMMD4-210ENST00000564587 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.68■□□□□ 0.9
COMMD4-210ENST00000564587 TTC21AQ8NDW8 1320 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms