RNA–Protein interactions for RNA: ENST00000564511.1

TUBGCP4-209, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 3

Gene TUBGCP4, Length 588 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-209ENST00000564511 PADI6Q6TGC4 694 aa8.93□□□□□ -0.98
TUBGCP4-209ENST00000564511 RAPGEF2Q9Y4G8 1499 aa8.93□□□□□ -0.98
TUBGCP4-209ENST00000564511 KIAA0556O60303 1618 aa8.93□□□□□ -0.98
TUBGCP4-209ENST00000564511 ARID4BQ4LE39 1312 aaPredicted RBP8.92□□□□□ -0.98
TUBGCP4-209ENST00000564511 A0A0G2JS52 829 aa8.92□□□□□ -0.98
TUBGCP4-209ENST00000564511 ARID3CA6NKF2 412 aa8.92□□□□□ -0.98
TUBGCP4-209ENST00000564511 RAPGEF3O95398 923 aa8.92□□□□□ -0.98
TUBGCP4-209ENST00000564511 CFAP43Q8NDM7 1665 aa8.91□□□□□ -0.98
TUBGCP4-209ENST00000564511 PPP4CP60510 307 aa8.91□□□□□ -0.98
TUBGCP4-209ENST00000564511 P3H3Q8IVL6 736 aa8.91□□□□□ -0.98
TUBGCP4-209ENST00000564511 ARAP3Q8WWN8 1544 aa8.9□□□□□ -0.98
TUBGCP4-209ENST00000564511 SEMA3EO15041 775 aa8.9□□□□□ -0.98
TUBGCP4-209ENST00000564511 FAM9AQ8IZU1 332 aaPredicted RBP8.9□□□□□ -0.98
TUBGCP4-209ENST00000564511 HSPA2P54652 639 aa8.88□□□□□ -0.99
TUBGCP4-209ENST00000564511 KCNC4Q03721 635 aa8.88□□□□□ -0.99
TUBGCP4-209ENST00000564511 PTGDRQ13258 359 aa8.88□□□□□ -0.99
TUBGCP4-209ENST00000564511 GOLGA3Q08378 1498 aa8.88□□□□□ -0.99
TUBGCP4-209ENST00000564511 PHLDB1Q86UU1 1377 aa8.87□□□□□ -0.99
TUBGCP4-209ENST00000564511 ABCA8O94911 1581 aa8.87□□□□□ -0.99
TUBGCP4-209ENST00000564511 PCF11O94913 1555 aaKnown RBP8.87□□□□□ -0.99
TUBGCP4-209ENST00000564511 RGS20O76081 388 aa8.87□□□□□ -0.99
TUBGCP4-209ENST00000564511 EYA1Q99502 592 aa8.87□□□□□ -0.99
TUBGCP4-209ENST00000564511 ADAMTSL3P82987 1691 aa8.87□□□□□ -0.99
TUBGCP4-209ENST00000564511 HDGFP51858 240 aaKnown RBP8.86□□□□□ -0.99
TUBGCP4-209ENST00000564511 SWT1Q5T5J6 900 aaKnown RBP8.85□□□□□ -0.99
TUBGCP4-209ENST00000564511 ATP10BO94823 1461 aa8.84□□□□□ -0.99
TUBGCP4-209ENST00000564511 NUTM2FA1L443 756 aa8.84□□□□□ -0.99
TUBGCP4-209ENST00000564511 MADDQ8WXG6 1647 aa8.83□□□□□ -1
TUBGCP4-209ENST00000564511 HAP1P54257 671 aaPredicted RBP8.83□□□□□ -1
TUBGCP4-209ENST00000564511 TJAP1Q5JTD0 557 aa8.83□□□□□ -1
TUBGCP4-209ENST00000564511 NEO1Q92859 1461 aa8.83□□□□□ -1
TUBGCP4-209ENST00000564511 BCORL1Q5H9F3 1711 aa8.83□□□□□ -1
TUBGCP4-209ENST00000564511 RNF40O75150 1001 aa8.82□□□□□ -1
TUBGCP4-209ENST00000564511 TESPA1A2RU30 521 aaPredicted RBP8.81□□□□□ -1
TUBGCP4-209ENST00000564511 APLP1P51693 650 aa8.81□□□□□ -1
TUBGCP4-209ENST00000564511 ABCA9Q8IUA7 1624 aa8.8□□□□□ -1
TUBGCP4-209ENST00000564511 MLECQ14165 292 aa8.8□□□□□ -1
TUBGCP4-209ENST00000564511 FAM161AQ3B820 660 aa8.8□□□□□ -1
TUBGCP4-209ENST00000564511 MTRQ99707 1265 aa8.8□□□□□ -1
TUBGCP4-209ENST00000564511 KDM2AQ9Y2K7 1162 aa8.8□□□□□ -1
TUBGCP4-209ENST00000564511 ADGRG1Q9Y653 693 aa8.8□□□□□ -1
TUBGCP4-209ENST00000564511 CTTNBP2Q8WZ74 1663 aa8.8□□□□□ -1
TUBGCP4-209ENST00000564511 FCHSD2O94868 740 aa8.79□□□□□ -1
TUBGCP4-209ENST00000564511 SLF2Q8IX21 1173 aa8.79□□□□□ -1
TUBGCP4-209ENST00000564511 POGZQ7Z3K3 1410 aa8.79□□□□□ -1
TUBGCP4-209ENST00000564511 RIMS1Q86UR5 1692 aaKnown RBP8.78□□□□□ -1
TUBGCP4-209ENST00000564511 RBM26Q5T8P6 1007 aaKnown RBP8.78□□□□□ -1
TUBGCP4-209ENST00000564511 RBM46Q8TBY0 533 aaKnown RBP8.78□□□□□ -1
TUBGCP4-209ENST00000564511 IL21Q9HBE4 155 aa8.78□□□□□ -1
TUBGCP4-209ENST00000564511 DENND4BO75064 1496 aaPredicted RBP8.77□□□□□ -1
TUBGCP4-209ENST00000564511 PLEKHD1A6NEE1 506 aa8.77□□□□□ -1.01
TUBGCP4-209ENST00000564511 DNAJB2P25686 324 aa8.77□□□□□ -1.01
TUBGCP4-209ENST00000564511 ZNF516Q92618 1163 aa8.77□□□□□ -1.01
TUBGCP4-209ENST00000564511 FRMPD1Q5SYB0 1578 aa8.77□□□□□ -1.01
TUBGCP4-209ENST00000564511 RANGAP1P46060 587 aaPredicted RBP8.76□□□□□ -1.01
TUBGCP4-209ENST00000564511 NECTIN2Q92692 538 aa8.76□□□□□ -1.01
TUBGCP4-209ENST00000564511 AKNAQ7Z591 1439 aa8.76□□□□□ -1.01
TUBGCP4-209ENST00000564511 FANCAO15360 1455 aa8.76□□□□□ -1.01
TUBGCP4-209ENST00000564511 RCCD1A6NED2 376 aa8.75□□□□□ -1.01
TUBGCP4-209ENST00000564511 SMYD5Q6GMV2 418 aa8.75□□□□□ -1.01
TUBGCP4-209ENST00000564511 TMEM134Q9H6X4 195 aa8.75□□□□□ -1.01
TUBGCP4-209ENST00000564511 PRXQ9BXM0 1461 aa8.75□□□□□ -1.01
TUBGCP4-209ENST00000564511 ARHGEF40Q8TER5 1519 aa8.75□□□□□ -1.01
TUBGCP4-209ENST00000564511 FHOD3Q2V2M9 1422 aa8.74□□□□□ -1.01
TUBGCP4-209ENST00000564511 YEATS2Q9ULM3 1422 aa8.74□□□□□ -1.01
TUBGCP4-209ENST00000564511 CEBPAP49715 358 aaPredicted RBP8.74□□□□□ -1.01
TUBGCP4-209ENST00000564511 IRX2Q9BZI1 471 aaPredicted RBP8.74□□□□□ -1.01
TUBGCP4-209ENST00000564511 SLC4A3P48751 1232 aa8.73□□□□□ -1.01
TUBGCP4-209ENST00000564511 HIC1Q14526 733 aa8.73□□□□□ -1.01
TUBGCP4-209ENST00000564511 NKX2-3Q8TAU0 364 aa8.73□□□□□ -1.01
TUBGCP4-209ENST00000564511 FECHP22830 423 aa8.72□□□□□ -1.01
TUBGCP4-209ENST00000564511 COPS2P61201 443 aa8.72□□□□□ -1.01
TUBGCP4-209ENST00000564511 RAPGEF6Q8TEU7 1601 aa8.72□□□□□ -1.01
TUBGCP4-209ENST00000564511 NUP153P49790 1475 aaKnown RBP8.71□□□□□ -1.01
TUBGCP4-209ENST00000564511 ZFYVE16Q7Z3T8 1539 aa8.71□□□□□ -1.01
TUBGCP4-209ENST00000564511 GPR37O15354 613 aa8.71□□□□□ -1.02
TUBGCP4-209ENST00000564511 PPP1R18Q6NYC8 613 aa8.71□□□□□ -1.02
TUBGCP4-209ENST00000564511 PXYLP1Q8TE99 480 aa8.71□□□□□ -1.02
TUBGCP4-209ENST00000564511 RICTORQ6R327 1708 aa8.71□□□□□ -1.02
TUBGCP4-209ENST00000564511 MAGI2Q86UL8 1455 aa8.7□□□□□ -1.02
TUBGCP4-209ENST00000564511 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.7□□□□□ -1.02
TUBGCP4-209ENST00000564511 OATP04181 439 aa8.7□□□□□ -1.02
TUBGCP4-209ENST00000564511 SCAPERQ9BY12 1400 aa8.7□□□□□ -1.02
TUBGCP4-209ENST00000564511 EFCAB5A4FU69 1503 aa8.7□□□□□ -1.02
TUBGCP4-209ENST00000564511 GNPATO15228 680 aa8.69□□□□□ -1.02
TUBGCP4-209ENST00000564511 ZMYM4Q5VZL5 1548 aa8.69□□□□□ -1.02
TUBGCP4-209ENST00000564511 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.69□□□□□ -1.02
TUBGCP4-209ENST00000564511 SIGLEC1Q9BZZ2 1709 aa8.68□□□□□ -1.02
TUBGCP4-209ENST00000564511 SLC10A3P09131 477 aa8.68□□□□□ -1.02
TUBGCP4-209ENST00000564511 VSIG10Q8N0Z9 540 aa8.68□□□□□ -1.02
TUBGCP4-209ENST00000564511 PRR14Q9BWN1 585 aa8.68□□□□□ -1.02
TUBGCP4-209ENST00000564511 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.68□□□□□ -1.02
TUBGCP4-209ENST00000564511 PCDHB3Q9Y5E6 796 aa8.68□□□□□ -1.02
TUBGCP4-209ENST00000564511 SAMD9Q5K651 1589 aa8.68□□□□□ -1.02
TUBGCP4-209ENST00000564511 TTC37Q6PGP7 1564 aa8.68□□□□□ -1.02
TUBGCP4-209ENST00000564511 CFAP74Q9C0B2 1584 aa8.68□□□□□ -1.02
TUBGCP4-209ENST00000564511 HECW1Q76N89 1606 aa8.68□□□□□ -1.02
TUBGCP4-209ENST00000564511 FER1L4A9Z1Z3 1794 aa8.67□□□□□ -1.02
TUBGCP4-209ENST00000564511 ATP10AO60312 1499 aa8.67□□□□□ -1.02
TUBGCP4-209ENST00000564511 ZPR1O75312 459 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms