RNA–Protein interactions for RNA: ENST00000563255.1

CDH11-207, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 545 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-207ENST00000563255 DLC1Q96QB1 1528 aa20.77■□□□□ 0.92
CDH11-207ENST00000563255 EIF3AQ14152 1382 aaKnown RBP20.76■□□□□ 0.91
CDH11-207ENST00000563255 LRPPRCP42704 1394 aaKnown RBP20.75■□□□□ 0.91
CDH11-207ENST00000563255 QRICH2Q9H0J4 1663 aa20.75■□□□□ 0.91
CDH11-207ENST00000563255 XRN1Q8IZH2 1706 aaKnown RBP20.75■□□□□ 0.91
CDH11-207ENST00000563255 ABCC11Q96J66 1382 aa20.74■□□□□ 0.91
CDH11-207ENST00000563255 TECPR2O15040 1411 aa20.73■□□□□ 0.91
CDH11-207ENST00000563255 C19orf44Q9H6X5 657 aa20.73■□□□□ 0.91
CDH11-207ENST00000563255 ZNF316A6NFI3 1004 aaPredicted RBP20.72■□□□□ 0.91
CDH11-207ENST00000563255 ATF3P18847 181 aa20.72■□□□□ 0.91
CDH11-207ENST00000563255 TRAK1Q9UPV9 953 aa20.72■□□□□ 0.91
CDH11-207ENST00000563255 AMOTL2Q9Y2J4 779 aa20.72■□□□□ 0.91
CDH11-207ENST00000563255 JCADQ9P266 1359 aa20.72■□□□□ 0.91
CDH11-207ENST00000563255 NCOA3Q9Y6Q9 1424 aa20.71■□□□□ 0.91
CDH11-207ENST00000563255 ST20-MTHFSA0A0A6YYL1 179 aa20.71■□□□□ 0.91
CDH11-207ENST00000563255 CADPS2Q86UW7 1296 aa20.71■□□□□ 0.91
CDH11-207ENST00000563255 SIRT1Q96EB6 747 aa20.71■□□□□ 0.91
CDH11-207ENST00000563255 PTPRUQ92729 1446 aa20.7■□□□□ 0.9
CDH11-207ENST00000563255 HIRIP3Q9BW71 556 aaPredicted RBP20.68■□□□□ 0.9
CDH11-207ENST00000563255 STK26Q9P289 416 aa20.68■□□□□ 0.9
CDH11-207ENST00000563255 SLC24A1O60721 1099 aa20.67■□□□□ 0.9
CDH11-207ENST00000563255 CENPJQ9HC77 1338 aaPredicted RBP20.67■□□□□ 0.9
CDH11-207ENST00000563255 SBNO2Q9Y2G9 1366 aa20.67■□□□□ 0.9
CDH11-207ENST00000563255 COL16A1Q07092 1604 aaPredicted RBP20.66■□□□□ 0.9
CDH11-207ENST00000563255 LRP6O75581 1613 aa20.65■□□□□ 0.9
CDH11-207ENST00000563255 PTCH1Q13635 1447 aa20.65■□□□□ 0.9
CDH11-207ENST00000563255 MEX3CQ5U5Q3 659 aaKnown RBP20.65■□□□□ 0.9
CDH11-207ENST00000563255 TESK2Q96S53 571 aa20.65■□□□□ 0.9
CDH11-207ENST00000563255 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.63■□□□□ 0.89
CDH11-207ENST00000563255 SPATA31A6Q5VVP1 1343 aa20.62■□□□□ 0.89
CDH11-207ENST00000563255 BRINP3Q76B58 766 aa20.61■□□□□ 0.89
CDH11-207ENST00000563255 PRAM1Q96QH2 718 aa20.61■□□□□ 0.89
CDH11-207ENST00000563255 POGKQ9P215 609 aa20.61■□□□□ 0.89
CDH11-207ENST00000563255 ROBO2Q9HCK4 1378 aa20.6■□□□□ 0.89
CDH11-207ENST00000563255 TMF1P82094 1093 aa20.59■□□□□ 0.89
CDH11-207ENST00000563255 WAPLQ7Z5K2 1190 aa20.58■□□□□ 0.89
CDH11-207ENST00000563255 ADGRB2O60241 1585 aa20.58■□□□□ 0.88
CDH11-207ENST00000563255 PLEKHH1Q9ULM0 1364 aa20.58■□□□□ 0.88
CDH11-207ENST00000563255 NUTM2BA6NNL0 878 aaPredicted RBP20.57■□□□□ 0.88
CDH11-207ENST00000563255 NUTM2EB1AL46 878 aaPredicted RBP20.57■□□□□ 0.88
CDH11-207ENST00000563255 C11orf95C9JLR9 678 aaPredicted RBP20.57■□□□□ 0.88
CDH11-207ENST00000563255 ZNF772Q68DY9 489 aaPredicted RBP20.57■□□□□ 0.88
CDH11-207ENST00000563255 NUTM2AQ8IVF1 878 aaPredicted RBP20.57■□□□□ 0.88
CDH11-207ENST00000563255 AHDC1Q5TGY3 1603 aaPredicted RBP20.55■□□□□ 0.88
CDH11-207ENST00000563255 CCDC7Q96M83 1385 aa20.55■□□□□ 0.88
CDH11-207ENST00000563255 NALCNQ8IZF0 1738 aa20.55■□□□□ 0.88
CDH11-207ENST00000563255 TULP4Q9NRJ4 1543 aa20.54■□□□□ 0.88
CDH11-207ENST00000563255 CDCA8Q53HL2 280 aa20.54■□□□□ 0.88
CDH11-207ENST00000563255 UPF1Q92900 1129 aaKnown RBP eCLIP20.54■□□□□ 0.88
CDH11-207ENST00000563255 KIF7Q2M1P5 1343 aa20.53■□□□□ 0.88
CDH11-207ENST00000563255 WASHC2AQ641Q2 1341 aa20.53■□□□□ 0.88
CDH11-207ENST00000563255 SAFB2Q14151 953 aaKnown RBP eCLIP20.53■□□□□ 0.88
CDH11-207ENST00000563255 PUS7Q96PZ0 661 aaKnown RBP20.53■□□□□ 0.88
CDH11-207ENST00000563255 SHPRHQ149N8 1683 aa20.53■□□□□ 0.88
CDH11-207ENST00000563255 DCCP43146 1447 aa20.53■□□□□ 0.88
CDH11-207ENST00000563255 EVC2Q86UK5 1308 aa20.53■□□□□ 0.88
CDH11-207ENST00000563255 MINK1Q8N4C8 1332 aaPredicted RBP20.52■□□□□ 0.87
CDH11-207ENST00000563255 MYOM1P52179 1685 aa20.51■□□□□ 0.87
CDH11-207ENST00000563255 LRRC59Q96AG4 307 aaKnown RBP20.5■□□□□ 0.87
CDH11-207ENST00000563255 MST1RQ04912 1400 aa20.5■□□□□ 0.87
CDH11-207ENST00000563255 DDX17Q92841 729 aaKnown RBP20.49■□□□□ 0.87
CDH11-207ENST00000563255 FMN2Q9NZ56 1722 aa20.48■□□□□ 0.87
CDH11-207ENST00000563255 RXRBP28702 533 aa20.48■□□□□ 0.87
CDH11-207ENST00000563255 CDC42BPGQ6DT37 1551 aa20.47■□□□□ 0.87
CDH11-207ENST00000563255 RGPD8O14715 1765 aaPredicted RBP20.47■□□□□ 0.87
CDH11-207ENST00000563255 ITSN1Q15811 1721 aa20.47■□□□□ 0.87
CDH11-207ENST00000563255 ADGRL3Q9HAR2 1447 aa20.46■□□□□ 0.87
CDH11-207ENST00000563255 WASLO00401 505 aaPredicted RBP20.46■□□□□ 0.87
CDH11-207ENST00000563255 CDK19Q9BWU1 502 aa20.45■□□□□ 0.86
CDH11-207ENST00000563255 AFF2P51816 1311 aa20.44■□□□□ 0.86
CDH11-207ENST00000563255 TOPAZ1Q8N9V7 1692 aa20.44■□□□□ 0.86
CDH11-207ENST00000563255 USP32Q8NFA0 1604 aa20.42■□□□□ 0.86
CDH11-207ENST00000563255 SRPK2P78362 688 aaKnown RBP20.42■□□□□ 0.86
CDH11-207ENST00000563255 C8orf37Q96NL8 207 aa20.42■□□□□ 0.86
CDH11-207ENST00000563255 ATAD2Q6PL18 1390 aa20.42■□□□□ 0.86
CDH11-207ENST00000563255 POLR3GLQ9BT43 218 aa20.41■□□□□ 0.86
CDH11-207ENST00000563255 CABP2Q9NPB3 220 aa20.41■□□□□ 0.86
CDH11-207ENST00000563255 DDX10Q13206 875 aaKnown RBP20.4■□□□□ 0.86
CDH11-207ENST00000563255 NHSL1Q5SYE7 1610 aa20.39■□□□□ 0.86
CDH11-207ENST00000563255 NINLQ9Y2I6 1382 aa20.39■□□□□ 0.85
CDH11-207ENST00000563255 ORAI2Q96SN7 254 aa20.39■□□□□ 0.85
CDH11-207ENST00000563255 ATP7BP35670 1465 aa20.38■□□□□ 0.85
CDH11-207ENST00000563255 C1orf167Q5SNV9 1468 aa20.38■□□□□ 0.85
CDH11-207ENST00000563255 PNPLA6Q8IY17 1366 aa20.38■□□□□ 0.85
CDH11-207ENST00000563255 QTRT2Q9H974 415 aaKnown RBP20.38■□□□□ 0.85
CDH11-207ENST00000563255 AKAP12Q02952 1782 aa20.38■□□□□ 0.85
CDH11-207ENST00000563255 ANKARQ7Z5J8 1434 aa20.37■□□□□ 0.85
CDH11-207ENST00000563255 ADAMTS2O95450 1211 aa20.37■□□□□ 0.85
CDH11-207ENST00000563255 NGLY1Q96IV0 654 aa20.37■□□□□ 0.85
CDH11-207ENST00000563255 RGS12O14924 1447 aa20.36■□□□□ 0.85
CDH11-207ENST00000563255 NUDT16Q96DE0 195 aaKnown RBP20.35■□□□□ 0.85
CDH11-207ENST00000563255 CCDC61Q9Y6R9 512 aa20.34■□□□□ 0.85
CDH11-207ENST00000563255 PRR36Q9H6K5 1346 aa20.33■□□□□ 0.85
CDH11-207ENST00000563255 RBM6P78332 1123 aaKnown RBP20.33■□□□□ 0.85
CDH11-207ENST00000563255 SOS2Q07890 1332 aaPredicted RBP20.32■□□□□ 0.84
CDH11-207ENST00000563255 CDK12Q9NYV4 1490 aaPredicted RBP20.32■□□□□ 0.84
CDH11-207ENST00000563255 PPIP5K1Q6PFW1 1433 aa20.32■□□□□ 0.84
CDH11-207ENST00000563255 MON2Q7Z3U7 1717 aa20.32■□□□□ 0.84
CDH11-207ENST00000563255 DIEXFQ68CQ4 756 aaKnown RBP20.31■□□□□ 0.84
CDH11-207ENST00000563255 TMC1Q8TDI8 760 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms