RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 LHX8Q68G74 356 aa6.24□□□□□ -1.41
SMG1-207ENST00000563235 ZNF622Q969S3 477 aaKnown RBP eCLIP6.24□□□□□ -1.41
SMG1-207ENST00000563235 TMA7Q9Y2S6 64 aaKnown RBP6.24□□□□□ -1.41
SMG1-207ENST00000563235 CLGNO14967 610 aa6.24□□□□□ -1.41
SMG1-207ENST00000563235 PIF1Q9H611 641 aa6.24□□□□□ -1.41
SMG1-207ENST00000563235 KAT6BQ8WYB5 2073 aa6.24□□□□□ -1.41
SMG1-207ENST00000563235 TLDC2A0PJX2 215 aa6.23□□□□□ -1.41
SMG1-207ENST00000563235 WDHD1O75717 1129 aaPredicted RBP6.23□□□□□ -1.41
SMG1-207ENST00000563235 CD44P16070 742 aaKnown RBP6.23□□□□□ -1.41
SMG1-207ENST00000563235 EVA1CP58658 441 aa6.23□□□□□ -1.41
SMG1-207ENST00000563235 ARMCX6Q7L4S7 300 aa6.23□□□□□ -1.41
SMG1-207ENST00000563235 NPAS4Q8IUM7 802 aa6.23□□□□□ -1.41
SMG1-207ENST00000563235 PRR12Q9ULL5 1215 aa6.23□□□□□ -1.41
SMG1-207ENST00000563235 G3BP2Q9UN86 482 aaKnown RBP6.23□□□□□ -1.41
SMG1-207ENST00000563235 SH3BP1Q9Y3L3 701 aa6.23□□□□□ -1.41
SMG1-207ENST00000563235 ZNF500O60304 480 aaPredicted RBP6.23□□□□□ -1.41
SMG1-207ENST00000563235 CFAP70Q5T0N1 1121 aa6.23□□□□□ -1.41
SMG1-207ENST00000563235 GET4Q7L5D6 327 aaPredicted RBP6.23□□□□□ -1.41
SMG1-207ENST00000563235 CCDC146Q8IYE0 955 aa6.23□□□□□ -1.41
SMG1-207ENST00000563235 TMX4Q9H1E5 349 aaPredicted RBP6.23□□□□□ -1.41
SMG1-207ENST00000563235 GDPD2Q9HCC8 539 aa6.23□□□□□ -1.41
SMG1-207ENST00000563235 ERBB3P21860 1342 aa6.23□□□□□ -1.41
SMG1-207ENST00000563235 LAMC3Q9Y6N6 1575 aa6.23□□□□□ -1.41
SMG1-207ENST00000563235 CCDC189A1A4V9 331 aa6.22□□□□□ -1.41
SMG1-207ENST00000563235 PDE6BP35913 854 aa6.22□□□□□ -1.41
SMG1-207ENST00000563235 AMHR2Q16671 573 aa6.22□□□□□ -1.41
SMG1-207ENST00000563235 GNEQ9Y223 722 aaKnown RBP6.22□□□□□ -1.41
SMG1-207ENST00000563235 ARHGEF11O15085 1522 aa6.22□□□□□ -1.41
SMG1-207ENST00000563235 NCAPD3P42695 1498 aa6.22□□□□□ -1.41
SMG1-207ENST00000563235 PPP4CP60510 307 aa6.22□□□□□ -1.41
SMG1-207ENST00000563235 TCEAL1Q15170 157 aa6.22□□□□□ -1.41
SMG1-207ENST00000563235 C9orf131Q5VYM1 1079 aa6.22□□□□□ -1.41
SMG1-207ENST00000563235 SDE2Q6IQ49 451 aa6.22□□□□□ -1.41
SMG1-207ENST00000563235 NOP9Q86U38 636 aaKnown RBP6.22□□□□□ -1.41
SMG1-207ENST00000563235 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.22□□□□□ -1.41
SMG1-207ENST00000563235 OXER1Q8TDS5 423 aa6.22□□□□□ -1.41
SMG1-207ENST00000563235 EIF3JO75822 258 aaKnown RBP6.22□□□□□ -1.41
SMG1-207ENST00000563235 CCDC144BQ3MJ40 725 aa6.22□□□□□ -1.41
SMG1-207ENST00000563235 PROCA1Q8NCQ7 364 aaPredicted RBP6.22□□□□□ -1.41
SMG1-207ENST00000563235 NRBP1Q9UHY1 535 aa6.22□□□□□ -1.41
SMG1-207ENST00000563235 TBX22Q9Y458 520 aa6.22□□□□□ -1.41
SMG1-207ENST00000563235 CACTIN-AS1Q8N1I8 211 aa6.21□□□□□ -1.42
SMG1-207ENST00000563235 DHX38Q92620 1227 aaKnown RBP6.21□□□□□ -1.42
SMG1-207ENST00000563235 WDR78Q5VTH9 848 aa6.21□□□□□ -1.42
SMG1-207ENST00000563235 ZNF280DQ6N043 979 aa6.21□□□□□ -1.42
SMG1-207ENST00000563235 CREBRFQ8IUR6 639 aa6.21□□□□□ -1.42
SMG1-207ENST00000563235 HMGB1P1B2RPK0 211 aaPredicted RBP6.2□□□□□ -1.42
SMG1-207ENST00000563235 C7P10643 843 aa6.2□□□□□ -1.42
SMG1-207ENST00000563235 ADAMTS19Q8TE59 1207 aa6.2□□□□□ -1.42
SMG1-207ENST00000563235 DHX16O60231 1041 aaKnown RBP6.2□□□□□ -1.42
SMG1-207ENST00000563235 ZNF579Q8NAF0 562 aaKnown RBP6.2□□□□□ -1.42
SMG1-207ENST00000563235 HELBQ8NG08 1087 aaPredicted RBP6.2□□□□□ -1.42
SMG1-207ENST00000563235 PCGF6Q9BYE7 350 aa6.2□□□□□ -1.42
SMG1-207ENST00000563235 ARHGEF10LQ9HCE6 1279 aa6.2□□□□□ -1.42
SMG1-207ENST00000563235 COMMD10Q9Y6G5 202 aa6.2□□□□□ -1.42
SMG1-207ENST00000563235 SCRIBQ14160 1630 aa6.2□□□□□ -1.42
SMG1-207ENST00000563235 RPGRIP1LQ68CZ1 1315 aa6.2□□□□□ -1.42
SMG1-207ENST00000563235 TTC36A6NLP5 189 aa6.19□□□□□ -1.42
SMG1-207ENST00000563235 TBX4P57082 545 aa6.19□□□□□ -1.42
SMG1-207ENST00000563235 LMOD3Q0VAK6 560 aa6.19□□□□□ -1.42
SMG1-207ENST00000563235 PDAP1Q13442 181 aaKnown RBP6.19□□□□□ -1.42
SMG1-207ENST00000563235 CXorf38Q8TB03 319 aa6.19□□□□□ -1.42
SMG1-207ENST00000563235 CFAP69A5D8W1 941 aa6.19□□□□□ -1.42
SMG1-207ENST00000563235 HOXA2O43364 376 aa6.19□□□□□ -1.42
SMG1-207ENST00000563235 HSP90AB2PQ58FF8 381 aa6.19□□□□□ -1.42
SMG1-207ENST00000563235 FBXO31Q5XUX0 539 aaPredicted RBP6.19□□□□□ -1.42
SMG1-207ENST00000563235 RPUSD2Q8IZ73 545 aaKnown RBP6.19□□□□□ -1.42
SMG1-207ENST00000563235 STAG1Q8WVM7 1258 aa6.19□□□□□ -1.42
SMG1-207ENST00000563235 STAC3Q96MF2 364 aa6.19□□□□□ -1.42
SMG1-207ENST00000563235 REPIN1Q9BWE0 567 aaKnown RBP6.19□□□□□ -1.42
SMG1-207ENST00000563235 WDR62O43379 1518 aa6.19□□□□□ -1.42
SMG1-207ENST00000563235 SPDYE5A6NIY4 337 aa6.19□□□□□ -1.42
SMG1-207ENST00000563235 ANP32CO43423 234 aa6.19□□□□□ -1.42
SMG1-207ENST00000563235 LIG1P18858 919 aa6.19□□□□□ -1.42
SMG1-207ENST00000563235 NBPF11Q86T75 865 aa6.19□□□□□ -1.42
SMG1-207ENST00000563235 ATL2Q8NHH9 583 aa6.19□□□□□ -1.42
SMG1-207ENST00000563235 RPS6KC1Q96S38 1066 aa6.19□□□□□ -1.42
SMG1-207ENST00000563235 KIF21AQ7Z4S6 1674 aa6.18□□□□□ -1.42
SMG1-207ENST00000563235 ERCC5P28715 1186 aaPredicted RBP6.18□□□□□ -1.42
SMG1-207ENST00000563235 NEUROD1Q13562 356 aa6.18□□□□□ -1.42
SMG1-207ENST00000563235 TTLL12Q14166 644 aaPredicted RBP6.18□□□□□ -1.42
SMG1-207ENST00000563235 AMOTL1Q8IY63 956 aa6.18□□□□□ -1.42
SMG1-207ENST00000563235 FBXO9Q9UK97 447 aaPredicted RBP6.18□□□□□ -1.42
SMG1-207ENST00000563235 HMGXB3Q12766 1538 aa6.18□□□□□ -1.42
SMG1-207ENST00000563235 STK10O94804 968 aaKnown RBP6.18□□□□□ -1.42
SMG1-207ENST00000563235 TSNAXIP1Q2TAA8 658 aa6.18□□□□□ -1.42
SMG1-207ENST00000563235 NBPF1Q3BBV0 1214 aa6.18□□□□□ -1.42
SMG1-207ENST00000563235 ZKSCAN2Q63HK3 967 aa6.18□□□□□ -1.42
SMG1-207ENST00000563235 TANGO6Q9C0B7 1094 aa6.18□□□□□ -1.42
SMG1-207ENST00000563235 IRF2BPLQ9H1B7 796 aa6.18□□□□□ -1.42
SMG1-207ENST00000563235 PLEKHG6Q3KR16 790 aa6.17□□□□□ -1.42
SMG1-207ENST00000563235 RTL5Q5HYW3 569 aaPredicted RBP6.17□□□□□ -1.42
SMG1-207ENST00000563235 CREBZFQ9NS37 354 aa6.17□□□□□ -1.42
SMG1-207ENST00000563235 MAP3K20Q9NYL2 800 aaKnown RBP6.17□□□□□ -1.42
SMG1-207ENST00000563235 IQSEC3Q9UPP2 1182 aaPredicted RBP6.17□□□□□ -1.42
SMG1-207ENST00000563235 NOP58Q9Y2X3 529 aaKnown RBP6.17□□□□□ -1.42
SMG1-207ENST00000563235 GOLGA6CA6NDK9 693 aa6.17□□□□□ -1.42
SMG1-207ENST00000563235 GOLGA6BA6NDN3 693 aa6.17□□□□□ -1.42
SMG1-207ENST00000563235 GOLGA6DP0CG33 693 aa6.17□□□□□ -1.42
SMG1-207ENST00000563235 MMP14P50281 582 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms