RNA–Protein interactions for RNA: ENST00000558212.5

TRPM1-206, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 670 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-206ENST00000558212 ARSIQ5FYB1 569 aa10.92□□□□□ -0.66
TRPM1-206ENST00000558212 PARP9Q8IXQ6 854 aa10.92□□□□□ -0.66
TRPM1-206ENST00000558212 KHSRPQ92945 711 aaKnown RBP eCLIP10.92□□□□□ -0.66
TRPM1-206ENST00000558212 ZNF518AQ6AHZ1 1483 aa10.92□□□□□ -0.66
TRPM1-206ENST00000558212 NCOA1Q15788 1441 aa10.92□□□□□ -0.66
TRPM1-206ENST00000558212 RIMBP2O15034 1052 aa10.91□□□□□ -0.66
TRPM1-206ENST00000558212 C3P01024 1663 aa10.91□□□□□ -0.66
TRPM1-206ENST00000558212 REREQ9P2R6 1566 aa10.9□□□□□ -0.66
TRPM1-206ENST00000558212 ZDHHC16Q969W1 377 aa10.9□□□□□ -0.66
TRPM1-206ENST00000558212 RBM33Q96EV2 1170 aaKnown RBP10.9□□□□□ -0.66
TRPM1-206ENST00000558212 TRAPPC8Q9Y2L5 1435 aa10.9□□□□□ -0.66
TRPM1-206ENST00000558212 KDM5CP41229 1560 aa10.9□□□□□ -0.67
TRPM1-206ENST00000558212 C6orf132Q5T0Z8 1188 aa10.89□□□□□ -0.67
TRPM1-206ENST00000558212 EFCAB2Q5VUJ9 269 aa10.89□□□□□ -0.67
TRPM1-206ENST00000558212 MYO5CQ9NQX4 1742 aa10.89□□□□□ -0.67
TRPM1-206ENST00000558212 ZNF454Q8N9F8 522 aa10.88□□□□□ -0.67
TRPM1-206ENST00000558212 TTC13Q8NBP0 860 aa10.88□□□□□ -0.67
TRPM1-206ENST00000558212 RBM27Q9P2N5 1060 aaKnown RBP10.88□□□□□ -0.67
TRPM1-206ENST00000558212 DIP2CQ9Y2E4 1556 aa10.88□□□□□ -0.67
TRPM1-206ENST00000558212 TMUB1Q9BVT8 246 aa10.87□□□□□ -0.67
TRPM1-206ENST00000558212 ADAM33Q9BZ11 813 aa10.87□□□□□ -0.67
TRPM1-206ENST00000558212 AGLP35573 1532 aa10.87□□□□□ -0.67
TRPM1-206ENST00000558212 CDK13Q14004 1512 aaKnown RBP10.87□□□□□ -0.67
TRPM1-206ENST00000558212 UBAP1LF5GYI3 381 aa10.86□□□□□ -0.67
TRPM1-206ENST00000558212 ESF1Q9H501 851 aaKnown RBP10.86□□□□□ -0.67
TRPM1-206ENST00000558212 CNTLNQ9NXG0 1405 aa10.85□□□□□ -0.67
TRPM1-206ENST00000558212 CAMSAP1Q5T5Y3 1602 aa10.85□□□□□ -0.67
TRPM1-206ENST00000558212 FAM117AQ9C073 453 aa10.85□□□□□ -0.67
TRPM1-206ENST00000558212 NPATQ14207 1427 aa10.84□□□□□ -0.67
TRPM1-206ENST00000558212 PLEKHG3A1L390 1219 aa10.84□□□□□ -0.67
TRPM1-206ENST00000558212 ERICH6Q7L0X2 663 aa10.84□□□□□ -0.67
TRPM1-206ENST00000558212 PHOX2BQ99453 314 aa10.84□□□□□ -0.67
TRPM1-206ENST00000558212 LHX6Q9UPM6 363 aa10.84□□□□□ -0.67
TRPM1-206ENST00000558212 MLH3Q9UHC1 1453 aa10.84□□□□□ -0.67
TRPM1-206ENST00000558212 ABCA6Q8N139 1617 aa10.84□□□□□ -0.67
TRPM1-206ENST00000558212 MED1Q15648 1581 aaPredicted RBP10.83□□□□□ -0.68
TRPM1-206ENST00000558212 PSDA5PKW4 1024 aaPredicted RBP10.83□□□□□ -0.68
TRPM1-206ENST00000558212 RANGAP1P46060 587 aaPredicted RBP10.83□□□□□ -0.68
TRPM1-206ENST00000558212 ZNF710Q8N1W2 664 aa10.83□□□□□ -0.68
TRPM1-206ENST00000558212 AFAP1Q8N556 730 aa10.83□□□□□ -0.68
TRPM1-206ENST00000558212 IL27Q8NEV9 243 aa10.83□□□□□ -0.68
TRPM1-206ENST00000558212 REPIN1Q9BWE0 567 aaKnown RBP10.83□□□□□ -0.68
TRPM1-206ENST00000558212 ARHGAP5Q13017 1502 aa10.83□□□□□ -0.68
TRPM1-206ENST00000558212 ZNF335Q9H4Z2 1342 aaPredicted RBP10.83□□□□□ -0.68
TRPM1-206ENST00000558212 HOXB1P14653 301 aaPredicted RBP10.82□□□□□ -0.68
TRPM1-206ENST00000558212 DDRGK1Q96HY6 314 aa10.82□□□□□ -0.68
TRPM1-206ENST00000558212 MYT1LQ9UL68 1186 aa10.82□□□□□ -0.68
TRPM1-206ENST00000558212 KIF14Q15058 1648 aa10.82□□□□□ -0.68
TRPM1-206ENST00000558212 MROH2AA6NES4 1674 aa10.82□□□□□ -0.68
TRPM1-206ENST00000558212 PLA2R1Q13018 1463 aa10.81□□□□□ -0.68
TRPM1-206ENST00000558212 SNPHO15079 494 aa10.81□□□□□ -0.68
TRPM1-206ENST00000558212 PADI6Q6TGC4 694 aa10.81□□□□□ -0.68
TRPM1-206ENST00000558212 GIGYF2Q6Y7W6 1299 aaKnown RBP10.81□□□□□ -0.68
TRPM1-206ENST00000558212 BCL2L12Q9HB09 334 aa10.81□□□□□ -0.68
TRPM1-206ENST00000558212 ZNF142P52746 1687 aaPredicted RBP10.8□□□□□ -0.68
TRPM1-206ENST00000558212 METTL3Q86U44 580 aaKnown RBP10.8□□□□□ -0.68
TRPM1-206ENST00000558212 OTUD5Q96G74 571 aa10.8□□□□□ -0.68
TRPM1-206ENST00000558212 ARXQ96QS3 562 aa10.8□□□□□ -0.68
TRPM1-206ENST00000558212 CDK11AQ9UQ88 783 aaPredicted RBP10.8□□□□□ -0.68
TRPM1-206ENST00000558212 ADGRG1Q9Y653 693 aa10.8□□□□□ -0.68
TRPM1-206ENST00000558212 TTLL12Q14166 644 aaPredicted RBP10.79□□□□□ -0.68
TRPM1-206ENST00000558212 PXYLP1Q8TE99 480 aa10.79□□□□□ -0.68
TRPM1-206ENST00000558212 TCOF1Q13428 1488 aaKnown RBP10.79□□□□□ -0.68
TRPM1-206ENST00000558212 TROQ12816 1431 aaPredicted RBP10.78□□□□□ -0.68
TRPM1-206ENST00000558212 EEA1Q15075 1411 aa10.78□□□□□ -0.68
TRPM1-206ENST00000558212 MS4A1P11836 297 aa10.78□□□□□ -0.68
TRPM1-206ENST00000558212 PPP4R3BQ5MIZ7 849 aa10.78□□□□□ -0.68
TRPM1-206ENST00000558212 CLIP1P30622 1438 aa10.77□□□□□ -0.68
TRPM1-206ENST00000558212 FMN1Q68DA7 1419 aa10.77□□□□□ -0.68
TRPM1-206ENST00000558212 OATP04181 439 aa10.77□□□□□ -0.69
TRPM1-206ENST00000558212 CLCN1P35523 988 aa10.77□□□□□ -0.69
TRPM1-206ENST00000558212 PRSS12P56730 875 aa10.77□□□□□ -0.69
TRPM1-206ENST00000558212 GOPCQ9HD26 462 aa10.77□□□□□ -0.69
TRPM1-206ENST00000558212 GPCPD1Q9NPB8 672 aa10.77□□□□□ -0.69
TRPM1-206ENST00000558212 ABCC1P33527 1531 aa10.77□□□□□ -0.69
TRPM1-206ENST00000558212 MYO3AQ8NEV4 1616 aa10.76□□□□□ -0.69
TRPM1-206ENST00000558212 CDC42BPBQ9Y5S2 1711 aa10.76□□□□□ -0.69
TRPM1-206ENST00000558212 KIDINS220Q9ULH0 1771 aa10.76□□□□□ -0.69
TRPM1-206ENST00000558212 HSPA1LP34931 641 aa10.76□□□□□ -0.69
TRPM1-206ENST00000558212 CDCA7LQ96GN5 454 aa10.76□□□□□ -0.69
TRPM1-206ENST00000558212 ZMYM3Q14202 1370 aa10.76□□□□□ -0.69
TRPM1-206ENST00000558212 ITSN2Q9NZM3 1697 aa10.76□□□□□ -0.69
TRPM1-206ENST00000558212 SUPT6HQ7KZ85 1726 aaKnown RBP10.75□□□□□ -0.69
TRPM1-206ENST00000558212 CEP170BQ9Y4F5 1589 aaPredicted RBP10.75□□□□□ -0.69
TRPM1-206ENST00000558212 COL9A1P20849 921 aa10.75□□□□□ -0.69
TRPM1-206ENST00000558212 FAM161AQ3B820 660 aa10.75□□□□□ -0.69
TRPM1-206ENST00000558212 PREX2Q70Z35 1606 aa10.74□□□□□ -0.69
TRPM1-206ENST00000558212 PPP1R3GB7ZBB8 358 aa10.74□□□□□ -0.69
TRPM1-206ENST00000558212 TOM1O60784 492 aa10.74□□□□□ -0.69
TRPM1-206ENST00000558212 FAM198AQ9UFP1 575 aa10.74□□□□□ -0.69
TRPM1-206ENST00000558212 CPS1P31327 1500 aa10.74□□□□□ -0.69
TRPM1-206ENST00000558212 MDM2Q00987 491 aaPredicted RBP10.73□□□□□ -0.69
TRPM1-206ENST00000558212 PIP4K2BP78356 416 aa10.72□□□□□ -0.69
TRPM1-206ENST00000558212 ATP1B4Q9UN42 357 aaPredicted RBP10.72□□□□□ -0.69
TRPM1-206ENST00000558212 PTPRKQ15262 1439 aa10.72□□□□□ -0.69
TRPM1-206ENST00000558212 PTPREP23469 700 aa10.71□□□□□ -0.69
TRPM1-206ENST00000558212 CLTCQ00610 1675 aaKnown RBP10.71□□□□□ -0.69
TRPM1-206ENST00000558212 FAM217BQ9NTX9 383 aaPredicted RBP10.71□□□□□ -0.69
TRPM1-206ENST00000558212 SAMD9LQ8IVG5 1584 aa10.7□□□□□ -0.7
TRPM1-206ENST00000558212 TSKSQ9UJT2 592 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms