RNA–Protein interactions for RNA: ENST00000557609.5

LGMN-217, Transcript of legumain, humanhuman

TSL 5

Gene LGMN, Length 1,832 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-217ENST00000557609 CABP2Q9NPB3 220 aa22.89■■□□□ 1.26
LGMN-217ENST00000557609 BRD4O60885 1362 aaPredicted RBP22.89■■□□□ 1.25
LGMN-217ENST00000557609 WAPLQ7Z5K2 1190 aa22.89■■□□□ 1.25
LGMN-217ENST00000557609 SLC12A5Q9H2X9 1139 aa22.89■■□□□ 1.25
LGMN-217ENST00000557609 SRPK2P78362 688 aaKnown RBP22.87■■□□□ 1.25
LGMN-217ENST00000557609 NLRP13Q86W25 1043 aa22.87■■□□□ 1.25
LGMN-217ENST00000557609 CARD14Q9BXL6 1004 aa22.87■■□□□ 1.25
LGMN-217ENST00000557609 PLEKHH1Q9ULM0 1364 aa22.87■■□□□ 1.25
LGMN-217ENST00000557609 NPC1L1Q9UHC9 1359 aa22.86■■□□□ 1.25
LGMN-217ENST00000557609 TECPR2O15040 1411 aa22.85■■□□□ 1.25
LGMN-217ENST00000557609 HNRNPUQ00839 825 aaKnown RBP eCLIP22.85■■□□□ 1.25
LGMN-217ENST00000557609 KNDC1Q76NI1 1749 aa22.85■■□□□ 1.25
LGMN-217ENST00000557609 MED14O60244 1454 aa22.85■■□□□ 1.25
LGMN-217ENST00000557609 SIRT1Q96EB6 747 aa22.85■■□□□ 1.25
LGMN-217ENST00000557609 SLC26A8Q96RN1 970 aa22.84■■□□□ 1.25
LGMN-217ENST00000557609 ATAD2Q6PL18 1390 aa22.83■■□□□ 1.25
LGMN-217ENST00000557609 FAM135BQ49AJ0 1406 aa22.83■■□□□ 1.24
LGMN-217ENST00000557609 CDK19Q9BWU1 502 aa22.82■■□□□ 1.24
LGMN-217ENST00000557609 CPS1P31327 1500 aa22.82■■□□□ 1.24
LGMN-217ENST00000557609 PNISRQ8TF01 805 aaKnown RBP22.82■■□□□ 1.24
LGMN-217ENST00000557609 NINLQ9Y2I6 1382 aa22.81■■□□□ 1.24
LGMN-217ENST00000557609 NSD3Q9BZ95 1437 aa22.81■■□□□ 1.24
LGMN-217ENST00000557609 ZNF142P52746 1687 aaPredicted RBP22.8■■□□□ 1.24
LGMN-217ENST00000557609 TBX22Q9Y458 520 aa22.8■■□□□ 1.24
LGMN-217ENST00000557609 ANKRD36BQ8N2N9 1353 aa22.8■■□□□ 1.24
LGMN-217ENST00000557609 ROBO2Q9HCK4 1378 aa22.77■■□□□ 1.24
LGMN-217ENST00000557609 DIP2AQ14689 1571 aa22.77■■□□□ 1.24
LGMN-217ENST00000557609 PTPRUQ92729 1446 aa22.77■■□□□ 1.23
LGMN-217ENST00000557609 SETD1BQ9UPS6 1966 aaKnown RBP22.76■■□□□ 1.23
LGMN-217ENST00000557609 PPP2R1AP30153 589 aa22.76■■□□□ 1.23
LGMN-217ENST00000557609 SCAF1Q9H7N4 1312 aaKnown RBP22.76■■□□□ 1.23
LGMN-217ENST00000557609 ANKLE2Q86XL3 938 aa22.75■■□□□ 1.23
LGMN-217ENST00000557609 WASLO00401 505 aaPredicted RBP22.74■■□□□ 1.23
LGMN-217ENST00000557609 AMOTL2Q9Y2J4 779 aa22.73■■□□□ 1.23
LGMN-217ENST00000557609 GTF3C3Q9Y5Q9 886 aa22.73■■□□□ 1.23
LGMN-217ENST00000557609 A0A1W2PP64 1363 aa22.73■■□□□ 1.23
LGMN-217ENST00000557609 CGNL1Q0VF96 1302 aa22.72■■□□□ 1.23
LGMN-217ENST00000557609 USP32Q8NFA0 1604 aa22.72■■□□□ 1.23
LGMN-217ENST00000557609 TERF2IPQ9NYB0 399 aa22.72■■□□□ 1.23
LGMN-217ENST00000557609 CABP1Q9NZU7 370 aa22.71■■□□□ 1.23
LGMN-217ENST00000557609 CD163L1Q9NR16 1453 aa22.69■■□□□ 1.22
LGMN-217ENST00000557609 HDGFL2Q7Z4V5 671 aaPredicted RBP22.68■■□□□ 1.22
LGMN-217ENST00000557609 MORC1Q86VD1 984 aa22.68■■□□□ 1.22
LGMN-217ENST00000557609 ZBED9Q6R2W3 1325 aa22.68■■□□□ 1.22
LGMN-217ENST00000557609 PTCH1Q13635 1447 aa22.67■■□□□ 1.22
LGMN-217ENST00000557609 PIK3R4Q99570 1358 aa22.67■■□□□ 1.22
LGMN-217ENST00000557609 NSD2O96028 1365 aa22.66■■□□□ 1.22
LGMN-217ENST00000557609 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.66■■□□□ 1.22
LGMN-217ENST00000557609 ADGRB2O60241 1585 aa22.65■■□□□ 1.22
LGMN-217ENST00000557609 NUDT16Q96DE0 195 aaKnown RBP22.65■■□□□ 1.22
LGMN-217ENST00000557609 ATP7BP35670 1465 aa22.64■■□□□ 1.21
LGMN-217ENST00000557609 XRN1Q8IZH2 1706 aaKnown RBP22.63■■□□□ 1.21
LGMN-217ENST00000557609 PPIP5K1Q6PFW1 1433 aa22.63■■□□□ 1.21
LGMN-217ENST00000557609 CCDC61Q9Y6R9 512 aa22.61■■□□□ 1.21
LGMN-217ENST00000557609 KCNA6P17658 529 aa22.61■■□□□ 1.21
LGMN-217ENST00000557609 TNNT2P45379 298 aaPredicted RBP22.6■■□□□ 1.21
LGMN-217ENST00000557609 NPHP4O75161 1426 aaPredicted RBP22.6■■□□□ 1.21
LGMN-217ENST00000557609 PRR36Q9H6K5 1346 aa22.59■■□□□ 1.21
LGMN-217ENST00000557609 INSRP06213 1382 aa22.59■■□□□ 1.21
LGMN-217ENST00000557609 NCKAP5LQ9HCH0 1330 aa22.59■■□□□ 1.21
LGMN-217ENST00000557609 WDR43Q15061 677 aaKnown RBP eCLIP22.58■■□□□ 1.21
LGMN-217ENST00000557609 FYB1O15117 783 aa22.57■■□□□ 1.2
LGMN-217ENST00000557609 GGNBP2Q9H3C7 697 aa22.57■■□□□ 1.2
LGMN-217ENST00000557609 CPSF1Q10570 1443 aaKnown RBP22.57■■□□□ 1.2
LGMN-217ENST00000557609 SENP3-EIF4A1A0A087X0R7 540 aa22.55■■□□□ 1.2
LGMN-217ENST00000557609 ADAMTS8Q9UP79 889 aa22.55■■□□□ 1.2
LGMN-217ENST00000557609 CDC42BPGQ6DT37 1551 aa22.55■■□□□ 1.2
LGMN-217ENST00000557609 BLMP54132 1417 aaPredicted RBP22.55■■□□□ 1.2
LGMN-217ENST00000557609 POLR3AO14802 1390 aaPredicted RBP22.54■■□□□ 1.2
LGMN-217ENST00000557609 CHD2O14647 1828 aaKnown RBP22.54■■□□□ 1.2
LGMN-217ENST00000557609 NUTM2FA1L443 756 aa22.54■■□□□ 1.2
LGMN-217ENST00000557609 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.53■■□□□ 1.2
LGMN-217ENST00000557609 EDC4Q6P2E9 1401 aaKnown RBP22.52■■□□□ 1.2
LGMN-217ENST00000557609 MTHFSP49914 203 aa22.51■■□□□ 1.19
LGMN-217ENST00000557609 ZNF692Q9BU19 519 aaPredicted RBP22.51■■□□□ 1.19
LGMN-217ENST00000557609 ANKRD26Q9UPS8 1709 aa22.51■■□□□ 1.19
LGMN-217ENST00000557609 KIF20BQ96Q89 1820 aa22.5■■□□□ 1.19
LGMN-217ENST00000557609 TOPAZ1Q8N9V7 1692 aa22.5■■□□□ 1.19
LGMN-217ENST00000557609 PLEKHG3A1L390 1219 aa22.49■■□□□ 1.19
LGMN-217ENST00000557609 KDM4FA0A1W2PPD8 638 aa22.48■■□□□ 1.19
LGMN-217ENST00000557609 ITSN1Q15811 1721 aa22.48■■□□□ 1.19
LGMN-217ENST00000557609 CFAP53Q96M91 514 aa22.47■■□□□ 1.19
LGMN-217ENST00000557609 MON2Q7Z3U7 1717 aa22.47■■□□□ 1.19
LGMN-217ENST00000557609 AKAP12Q02952 1782 aa22.47■■□□□ 1.19
LGMN-217ENST00000557609 ACEP12821 1306 aa22.47■■□□□ 1.19
LGMN-217ENST00000557609 NKTRP30414 1462 aaKnown RBP22.46■■□□□ 1.19
LGMN-217ENST00000557609 SALL2Q9Y467 1007 aaPredicted RBP22.45■■□□□ 1.19
LGMN-217ENST00000557609 NME9Q86XW9 330 aa22.44■■□□□ 1.18
LGMN-217ENST00000557609 ANKARQ7Z5J8 1434 aa22.43■■□□□ 1.18
LGMN-217ENST00000557609 RBM33Q96EV2 1170 aaKnown RBP22.42■■□□□ 1.18
LGMN-217ENST00000557609 SMG6Q86US8 1419 aaKnown RBP22.42■■□□□ 1.18
LGMN-217ENST00000557609 PMFBP1Q8TBY8 1022 aa22.41■■□□□ 1.18
LGMN-217ENST00000557609 SHPRHQ149N8 1683 aa22.41■■□□□ 1.18
LGMN-217ENST00000557609 NALCNQ8IZF0 1738 aa22.41■■□□□ 1.18
LGMN-217ENST00000557609 FMN2Q9NZ56 1722 aa22.41■■□□□ 1.18
LGMN-217ENST00000557609 USP6P35125 1406 aa22.4■■□□□ 1.18
LGMN-217ENST00000557609 NWD1Q149M9 1564 aa22.4■■□□□ 1.18
LGMN-217ENST00000557609 HSPA2P54652 639 aa22.4■■□□□ 1.18
LGMN-217ENST00000557609 CCDC146Q8IYE0 955 aa22.4■■□□□ 1.18
LGMN-217ENST00000557609 NUDCQ9Y266 331 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms