RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 RGS20O76081 388 aa8.16□□□□□ -1.1
ATXN3-247ENST00000557311 BCORL1Q5H9F3 1711 aa8.16□□□□□ -1.1
ATXN3-247ENST00000557311 ABCA9Q8IUA7 1624 aa8.16□□□□□ -1.1
ATXN3-247ENST00000557311 ANKK1Q8NFD2 765 aa8.16□□□□□ -1.1
ATXN3-247ENST00000557311 MADDQ8WXG6 1647 aa8.16□□□□□ -1.1
ATXN3-247ENST00000557311 SEPT9Q9UHD8 586 aaPredicted RBP8.16□□□□□ -1.1
ATXN3-247ENST00000557311 YEATS2Q9ULM3 1422 aa8.16□□□□□ -1.1
ATXN3-247ENST00000557311 FANCAO15360 1455 aa8.15□□□□□ -1.1
ATXN3-247ENST00000557311 SOWAHBA6NEL2 793 aa8.15□□□□□ -1.1
ATXN3-247ENST00000557311 CEBPAP49715 358 aaPredicted RBP8.15□□□□□ -1.1
ATXN3-247ENST00000557311 MYT1Q01538 1121 aa8.15□□□□□ -1.1
ATXN3-247ENST00000557311 ZFRQ96KR1 1074 aaKnown RBP8.15□□□□□ -1.1
ATXN3-247ENST00000557311 MAGI2Q86UL8 1455 aa8.14□□□□□ -1.11
ATXN3-247ENST00000557311 TESPA1A2RU30 521 aaPredicted RBP8.14□□□□□ -1.11
ATXN3-247ENST00000557311 PRIM1P49642 420 aaKnown RBP8.14□□□□□ -1.11
ATXN3-247ENST00000557311 LAPTM4BQ86VI4 370 aa8.14□□□□□ -1.11
ATXN3-247ENST00000557311 CDHR5Q9HBB8 845 aa8.14□□□□□ -1.11
ATXN3-247ENST00000557311 WBP1LQ9NX94 342 aa8.14□□□□□ -1.11
ATXN3-247ENST00000557311 ONECUT3O60422 494 aaPredicted RBP8.13□□□□□ -1.11
ATXN3-247ENST00000557311 ITGBL1O95965 494 aaPredicted RBP8.13□□□□□ -1.11
ATXN3-247ENST00000557311 TRIM6-TRIM34B2RNG4 842 aa8.12□□□□□ -1.11
ATXN3-247ENST00000557311 RBM26Q5T8P6 1007 aaKnown RBP8.12□□□□□ -1.11
ATXN3-247ENST00000557311 EFCAB2Q5VUJ9 269 aa8.12□□□□□ -1.11
ATXN3-247ENST00000557311 FRMPD1Q5SYB0 1578 aa8.12□□□□□ -1.11
ATXN3-247ENST00000557311 SCAPERQ9BY12 1400 aa8.12□□□□□ -1.11
ATXN3-247ENST00000557311 RANGAP1P46060 587 aaPredicted RBP8.11□□□□□ -1.11
ATXN3-247ENST00000557311 IRX2Q9BZI1 471 aaPredicted RBP8.11□□□□□ -1.11
ATXN3-247ENST00000557311 ARHGEF40Q8TER5 1519 aa8.11□□□□□ -1.11
ATXN3-247ENST00000557311 ATP10AO60312 1499 aa8.11□□□□□ -1.11
ATXN3-247ENST00000557311 NUP153P49790 1475 aaKnown RBP8.11□□□□□ -1.11
ATXN3-247ENST00000557311 PACS2Q86VP3 889 aa8.1□□□□□ -1.11
ATXN3-247ENST00000557311 RIMS1Q86UR5 1692 aaKnown RBP8.1□□□□□ -1.11
ATXN3-247ENST00000557311 PTPRTO14522 1441 aa8.1□□□□□ -1.11
ATXN3-247ENST00000557311 ZFYVE16Q7Z3T8 1539 aa8.09□□□□□ -1.11
ATXN3-247ENST00000557311 PRSS12P56730 875 aa8.09□□□□□ -1.11
ATXN3-247ENST00000557311 CDCA7LQ96GN5 454 aa8.09□□□□□ -1.11
ATXN3-247ENST00000557311 ESF1Q9H501 851 aaKnown RBP8.09□□□□□ -1.11
ATXN3-247ENST00000557311 TSKSQ9UJT2 592 aa8.09□□□□□ -1.11
ATXN3-247ENST00000557311 PLCH2O75038 1416 aa8.09□□□□□ -1.11
ATXN3-247ENST00000557311 UHRF1BP1Q6BDS2 1440 aa8.09□□□□□ -1.11
ATXN3-247ENST00000557311 EFCAB5A4FU69 1503 aa8.08□□□□□ -1.12
ATXN3-247ENST00000557311 FCHSD2O94868 740 aa8.08□□□□□ -1.12
ATXN3-247ENST00000557311 FAM98CQ17RN3 349 aaKnown RBP8.08□□□□□ -1.12
ATXN3-247ENST00000557311 GPIHBP1Q8IV16 184 aa8.08□□□□□ -1.12
ATXN3-247ENST00000557311 AFAP1Q8N556 730 aa8.08□□□□□ -1.12
ATXN3-247ENST00000557311 ZMYM4Q5VZL5 1548 aa8.08□□□□□ -1.12
ATXN3-247ENST00000557311 CTTNBP2Q8WZ74 1663 aa8.08□□□□□ -1.12
ATXN3-247ENST00000557311 C9orf84Q5VXU9 1444 aa8.07□□□□□ -1.12
ATXN3-247ENST00000557311 C3orf80F5H4A9 247 aa8.07□□□□□ -1.12
ATXN3-247ENST00000557311 FAM198AQ9UFP1 575 aa8.07□□□□□ -1.12
ATXN3-247ENST00000557311 CDK11AQ9UQ88 783 aaPredicted RBP8.07□□□□□ -1.12
ATXN3-247ENST00000557311 ARHGEF12Q9NZN5 1544 aa8.07□□□□□ -1.12
ATXN3-247ENST00000557311 RAPGEF6Q8TEU7 1601 aa8.07□□□□□ -1.12
ATXN3-247ENST00000557311 PADI6Q6TGC4 694 aa8.06□□□□□ -1.12
ATXN3-247ENST00000557311 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.06□□□□□ -1.12
ATXN3-247ENST00000557311 NBPF26B4DH59 902 aa8.05□□□□□ -1.12
ATXN3-247ENST00000557311 UBAP1LF5GYI3 381 aa8.05□□□□□ -1.12
ATXN3-247ENST00000557311 SMAPO00193 183 aa8.05□□□□□ -1.12
ATXN3-247ENST00000557311 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.05□□□□□ -1.12
ATXN3-247ENST00000557311 TSR3Q9UJK0 312 aaKnown RBP8.05□□□□□ -1.12
ATXN3-247ENST00000557311 PNMA3Q9UL41 463 aa8.05□□□□□ -1.12
ATXN3-247ENST00000557311 ATP1B4Q9UN42 357 aaPredicted RBP8.05□□□□□ -1.12
ATXN3-247ENST00000557311 HPS5Q9UPZ3 1129 aa8.05□□□□□ -1.12
ATXN3-247ENST00000557311 TTC37Q6PGP7 1564 aa8.05□□□□□ -1.12
ATXN3-247ENST00000557311 TRAPPC8Q9Y2L5 1435 aa8.04□□□□□ -1.12
ATXN3-247ENST00000557311 HECW1Q76N89 1606 aa8.04□□□□□ -1.12
ATXN3-247ENST00000557311 KCNC4Q03721 635 aa8.04□□□□□ -1.12
ATXN3-247ENST00000557311 PTGDRQ13258 359 aa8.04□□□□□ -1.12
ATXN3-247ENST00000557311 NYAP1Q6ZVC0 841 aa8.04□□□□□ -1.12
ATXN3-247ENST00000557311 IQSEC2Q5JU85 1478 aa8.04□□□□□ -1.12
ATXN3-247ENST00000557311 SAMD9Q5K651 1589 aa8.04□□□□□ -1.12
ATXN3-247ENST00000557311 RICTORQ6R327 1708 aa8.03□□□□□ -1.12
ATXN3-247ENST00000557311 CFAP74Q9C0B2 1584 aa8.03□□□□□ -1.12
ATXN3-247ENST00000557311 BCANQ96GW7 911 aa8.03□□□□□ -1.12
ATXN3-247ENST00000557311 LRCH3Q96II8 777 aa8.03□□□□□ -1.12
ATXN3-247ENST00000557311 SPATA31D1Q6ZQQ2 1576 aa8.02□□□□□ -1.13
ATXN3-247ENST00000557311 RNF40O75150 1001 aa8.02□□□□□ -1.13
ATXN3-247ENST00000557311 HDGFP51858 240 aaKnown RBP8.02□□□□□ -1.13
ATXN3-247ENST00000557311 LMOD2Q6P5Q4 547 aa8.02□□□□□ -1.13
ATXN3-247ENST00000557311 NUDT18Q6ZVK8 323 aa8.02□□□□□ -1.13
ATXN3-247ENST00000557311 NPDC1Q9NQX5 325 aaPredicted RBP8.02□□□□□ -1.13
ATXN3-247ENST00000557311 LTBP4Q8N2S1 1624 aa8.01□□□□□ -1.13
ATXN3-247ENST00000557311 TATDN2Q93075 761 aa8.01□□□□□ -1.13
ATXN3-247ENST00000557311 ZNF518AQ6AHZ1 1483 aa8□□□□□ -1.13
ATXN3-247ENST00000557311 HIC1Q14526 733 aa8□□□□□ -1.13
ATXN3-247ENST00000557311 NCOA1Q15788 1441 aa8□□□□□ -1.13
ATXN3-247ENST00000557311 ZNF335Q9H4Z2 1342 aaPredicted RBP8□□□□□ -1.13
ATXN3-247ENST00000557311 PREX1Q8TCU6 1659 aa7.99□□□□□ -1.13
ATXN3-247ENST00000557311 FAM161AQ3B820 660 aa7.99□□□□□ -1.13
ATXN3-247ENST00000557311 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.99□□□□□ -1.13
ATXN3-247ENST00000557311 SAMD7Q7Z3H4 446 aa7.99□□□□□ -1.13
ATXN3-247ENST00000557311 SIGLEC1Q9BZZ2 1709 aa7.99□□□□□ -1.13
ATXN3-247ENST00000557311 CNTLNQ9NXG0 1405 aa7.99□□□□□ -1.13
ATXN3-247ENST00000557311 RBM27Q9P2N5 1060 aaKnown RBP7.99□□□□□ -1.13
ATXN3-247ENST00000557311 FER1L4A9Z1Z3 1794 aa7.99□□□□□ -1.13
ATXN3-247ENST00000557311 STRCQ7RTU9 1775 aa7.99□□□□□ -1.13
ATXN3-247ENST00000557311 SETD1BQ9UPS6 1966 aaKnown RBP7.99□□□□□ -1.13
ATXN3-247ENST00000557311 ZMYM3Q14202 1370 aa7.98□□□□□ -1.13
ATXN3-247ENST00000557311 GNPATO15228 680 aa7.98□□□□□ -1.13
ATXN3-247ENST00000557311 PPP4CP60510 307 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms