RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 LAMC1P11047 1609 aa19.55■□□□□ 0.72
PSEN1-219ENST00000556951 COL22A1Q8NFW1 1626 aaPredicted RBP19.55■□□□□ 0.72
PSEN1-219ENST00000556951 DCAF8L1A6NGE4 600 aa19.55■□□□□ 0.72
PSEN1-219ENST00000556951 RALGAPBQ86X10 1494 aa19.54■□□□□ 0.72
PSEN1-219ENST00000556951 NRXN3Q9Y4C0 1643 aa19.52■□□□□ 0.72
PSEN1-219ENST00000556951 METP08581 1390 aa19.52■□□□□ 0.72
PSEN1-219ENST00000556951 XRN1Q8IZH2 1706 aaKnown RBP19.51■□□□□ 0.71
PSEN1-219ENST00000556951 SOS2Q07890 1332 aaPredicted RBP19.5■□□□□ 0.71
PSEN1-219ENST00000556951 SEPT12Q8IYM1 358 aa19.48■□□□□ 0.71
PSEN1-219ENST00000556951 MYOM2P54296 1465 aa19.48■□□□□ 0.71
PSEN1-219ENST00000556951 IQGAP3Q86VI3 1631 aa19.47■□□□□ 0.71
PSEN1-219ENST00000556951 EN1Q05925 392 aaPredicted RBP19.46■□□□□ 0.71
PSEN1-219ENST00000556951 CAMTA1Q9Y6Y1 1673 aa19.46■□□□□ 0.71
PSEN1-219ENST00000556951 NUP155O75694 1391 aa19.45■□□□□ 0.7
PSEN1-219ENST00000556951 ADGRL3Q9HAR2 1447 aa19.45■□□□□ 0.7
PSEN1-219ENST00000556951 KRT27Q7Z3Y8 459 aa19.44■□□□□ 0.7
PSEN1-219ENST00000556951 UNC5CLQ8IV45 518 aa19.44■□□□□ 0.7
PSEN1-219ENST00000556951 ROCK1Q13464 1354 aa19.44■□□□□ 0.7
PSEN1-219ENST00000556951 RGPD1P0DJD0 1748 aa19.43■□□□□ 0.7
PSEN1-219ENST00000556951 NINLQ9Y2I6 1382 aa19.43■□□□□ 0.7
PSEN1-219ENST00000556951 C1orf167Q5SNV9 1468 aa19.42■□□□□ 0.7
PSEN1-219ENST00000556951 ORAI2Q96SN7 254 aa19.42■□□□□ 0.7
PSEN1-219ENST00000556951 UTRNP46939 3433 aa19.4■□□□□ 0.7
PSEN1-219ENST00000556951 SLIT2O94813 1529 aa19.4■□□□□ 0.7
PSEN1-219ENST00000556951 ONECUT3O60422 494 aaPredicted RBP19.39■□□□□ 0.69
PSEN1-219ENST00000556951 ZNF326Q5BKZ1 582 aaKnown RBP19.39■□□□□ 0.69
PSEN1-219ENST00000556951 NALCNQ8IZF0 1738 aa19.39■□□□□ 0.69
PSEN1-219ENST00000556951 DISP2A7MBM2 1401 aa19.37■□□□□ 0.69
PSEN1-219ENST00000556951 PPP1R1BQ9UD71 204 aaPredicted RBP19.37■□□□□ 0.69
PSEN1-219ENST00000556951 CHD4Q14839 1912 aa19.36■□□□□ 0.69
PSEN1-219ENST00000556951 TNS1Q9HBL0 1735 aaKnown RBP19.34■□□□□ 0.69
PSEN1-219ENST00000556951 ROBO2Q9HCK4 1378 aa19.34■□□□□ 0.69
PSEN1-219ENST00000556951 NEXMIFQ5QGS0 1516 aa19.34■□□□□ 0.69
PSEN1-219ENST00000556951 EZH2Q15910 746 aaKnown RBP19.33■□□□□ 0.68
PSEN1-219ENST00000556951 SPON1Q9HCB6 807 aa19.31■□□□□ 0.68
PSEN1-219ENST00000556951 VPS72Q15906 364 aa19.3■□□□□ 0.68
PSEN1-219ENST00000556951 ITGAEP38570 1179 aa19.29■□□□□ 0.68
PSEN1-219ENST00000556951 CLTCL1P53675 1640 aa19.29■□□□□ 0.68
PSEN1-219ENST00000556951 CAMKK2Q96RR4 588 aa19.27■□□□□ 0.68
PSEN1-219ENST00000556951 PRAG1Q86YV5 1406 aa19.26■□□□□ 0.67
PSEN1-219ENST00000556951 KCNQ2O43526 872 aa19.26■□□□□ 0.67
PSEN1-219ENST00000556951 VGFO15240 615 aaPredicted RBP19.25■□□□□ 0.67
PSEN1-219ENST00000556951 GIGYF1O75420 1035 aaPredicted RBP19.24■□□□□ 0.67
PSEN1-219ENST00000556951 NWD2Q9ULI1 1742 aa19.24■□□□□ 0.67
PSEN1-219ENST00000556951 PXDNQ92626 1479 aa19.23■□□□□ 0.67
PSEN1-219ENST00000556951 RREB1Q92766 1687 aa19.23■□□□□ 0.67
PSEN1-219ENST00000556951 ADGRB2O60241 1585 aa19.23■□□□□ 0.67
PSEN1-219ENST00000556951 USP32Q8NFA0 1604 aa19.22■□□□□ 0.67
PSEN1-219ENST00000556951 FOXO3O43524 673 aa19.22■□□□□ 0.67
PSEN1-219ENST00000556951 ESCO1Q5FWF5 840 aa19.22■□□□□ 0.67
PSEN1-219ENST00000556951 CCDC9Q9Y3X0 531 aaKnown RBP19.22■□□□□ 0.67
PSEN1-219ENST00000556951 NPHP3Q7Z494 1330 aa19.22■□□□□ 0.67
PSEN1-219ENST00000556951 PARD3Q8TEW0 1356 aa19.21■□□□□ 0.67
PSEN1-219ENST00000556951 PLCH1Q4KWH8 1693 aa19.21■□□□□ 0.67
PSEN1-219ENST00000556951 A0A0G2JS52 829 aa19.21■□□□□ 0.67
PSEN1-219ENST00000556951 HFM1A2PYH4 1435 aa19.21■□□□□ 0.67
PSEN1-219ENST00000556951 MYT1Q01538 1121 aa19.21■□□□□ 0.67
PSEN1-219ENST00000556951 XPCQ01831 940 aaPredicted RBP19.21■□□□□ 0.67
PSEN1-219ENST00000556951 NUP188Q5SRE5 1749 aa19.21■□□□□ 0.67
PSEN1-219ENST00000556951 FAM182BQ5T319 152 aa19.19■□□□□ 0.66
PSEN1-219ENST00000556951 RPGRIP1LQ68CZ1 1315 aa19.18■□□□□ 0.66
PSEN1-219ENST00000556951 KIF1BO60333 1816 aa19.18■□□□□ 0.66
PSEN1-219ENST00000556951 NBPF8Q3BBV2 869 aa19.17■□□□□ 0.66
PSEN1-219ENST00000556951 NBPF14Q5TI25 921 aa19.17■□□□□ 0.66
PSEN1-219ENST00000556951 FAM98CQ17RN3 349 aaKnown RBP19.15■□□□□ 0.66
PSEN1-219ENST00000556951 NUTM2FA1L443 756 aa19.14■□□□□ 0.65
PSEN1-219ENST00000556951 WAPLQ7Z5K2 1190 aa19.14■□□□□ 0.65
PSEN1-219ENST00000556951 SPATA31A3Q5VYP0 1347 aa19.14■□□□□ 0.65
PSEN1-219ENST00000556951 CDC42BPGQ6DT37 1551 aa19.14■□□□□ 0.65
PSEN1-219ENST00000556951 PPARGC1BQ86YN6 1023 aaKnown RBP19.13■□□□□ 0.65
PSEN1-219ENST00000556951 NRKQ7Z2Y5 1582 aa19.13■□□□□ 0.65
PSEN1-219ENST00000556951 NAIPQ13075 1403 aa19.12■□□□□ 0.65
PSEN1-219ENST00000556951 APBA3O96018 575 aa19.11■□□□□ 0.65
PSEN1-219ENST00000556951 ADGRF5Q8IZF2 1346 aa19.1■□□□□ 0.65
PSEN1-219ENST00000556951 TRIM37O94972 964 aa19.1■□□□□ 0.65
PSEN1-219ENST00000556951 SLC34A2O95436 690 aa19.1■□□□□ 0.65
PSEN1-219ENST00000556951 PPLO60437 1756 aa19.09■□□□□ 0.65
PSEN1-219ENST00000556951 LRPPRCP42704 1394 aaKnown RBP19.09■□□□□ 0.65
PSEN1-219ENST00000556951 PLEKHH1Q9ULM0 1364 aa19.09■□□□□ 0.65
PSEN1-219ENST00000556951 MYOM1P52179 1685 aa19.08■□□□□ 0.65
PSEN1-219ENST00000556951 KRT28Q7Z3Y7 464 aa19.08■□□□□ 0.64
PSEN1-219ENST00000556951 STK26Q9P289 416 aa19.08■□□□□ 0.64
PSEN1-219ENST00000556951 TECPR2O15040 1411 aa19.08■□□□□ 0.64
PSEN1-219ENST00000556951 NRAPQ86VF7 1730 aa19.07■□□□□ 0.64
PSEN1-219ENST00000556951 ABCC11Q96J66 1382 aa19.06■□□□□ 0.64
PSEN1-219ENST00000556951 THSD7AQ9UPZ6 1657 aa19.06■□□□□ 0.64
PSEN1-219ENST00000556951 CABLES1Q8TDN4 633 aa19.06■□□□□ 0.64
PSEN1-219ENST00000556951 TMEM132EQ6IEE7 984 aa19.05■□□□□ 0.64
PSEN1-219ENST00000556951 CASZ1Q86V15 1759 aa19.05■□□□□ 0.64
PSEN1-219ENST00000556951 FAM196AQ6ZSG2 479 aa19.04■□□□□ 0.64
PSEN1-219ENST00000556951 HAP1P54257 671 aaPredicted RBP19.03■□□□□ 0.64
PSEN1-219ENST00000556951 SLC4A1APQ9BWU0 796 aaKnown RBP19.03■□□□□ 0.64
PSEN1-219ENST00000556951 SYT17Q9BSW7 474 aa19.02■□□□□ 0.64
PSEN1-219ENST00000556951 ABCA3Q99758 1704 aa19.01■□□□□ 0.63
PSEN1-219ENST00000556951 SHANK3Q9BYB0 1731 aa19.01■□□□□ 0.63
PSEN1-219ENST00000556951 FMN2Q9NZ56 1722 aa19.01■□□□□ 0.63
PSEN1-219ENST00000556951 FAM83GA6ND36 823 aa19.01■□□□□ 0.63
PSEN1-219ENST00000556951 CCDC144AA2RUR9 1427 aa19■□□□□ 0.63
PSEN1-219ENST00000556951 RRBP1Q9P2E9 1410 aaKnown RBP19■□□□□ 0.63
PSEN1-219ENST00000556951 SIRT1Q96EB6 747 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms