RNA–Protein interactions for RNA: ENST00000556626.5

SPTB-208, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best) BASIC

Gene SPTB, Length 10,153 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-208ENST00000556626 HSP90AB2PQ58FF8 381 aa13.03□□□□□ -0.32
SPTB-208ENST00000556626 ERICH2A1L162 156 aa13.03□□□□□ -0.32
SPTB-208ENST00000556626 SDF4Q9BRK5 362 aa13.03□□□□□ -0.32
SPTB-208ENST00000556626 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.03□□□□□ -0.32
SPTB-208ENST00000556626 PDCP20941 246 aa13.03□□□□□ -0.32
SPTB-208ENST00000556626 SMC2O95347 1197 aa13.02□□□□□ -0.32
SPTB-208ENST00000556626 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.02□□□□□ -0.33
SPTB-208ENST00000556626 ERC2O15083 957 aa13.02□□□□□ -0.33
SPTB-208ENST00000556626 MCM2P49736 904 aa13.02□□□□□ -0.33
SPTB-208ENST00000556626 PLCD4Q9BRC7 762 aa13.02□□□□□ -0.33
SPTB-208ENST00000556626 CCDC9Q9Y3X0 531 aaKnown RBP13.02□□□□□ -0.33
SPTB-208ENST00000556626 NFXL1Q6ZNB6 911 aa13.01□□□□□ -0.33
SPTB-208ENST00000556626 ST20-MTHFSA0A0A6YYL1 179 aa13.01□□□□□ -0.33
SPTB-208ENST00000556626 PSMA5P28066 241 aa13.01□□□□□ -0.33
SPTB-208ENST00000556626 BRMS1Q9HCU9 246 aa13.01□□□□□ -0.33
SPTB-208ENST00000556626 ERLIN2O94905 339 aa13.01□□□□□ -0.33
SPTB-208ENST00000556626 DYDC1Q8WWB3 177 aa13□□□□□ -0.33
SPTB-208ENST00000556626 OFD1O75665 1012 aa13□□□□□ -0.33
SPTB-208ENST00000556626 TTLL5Q6EMB2 1281 aa13□□□□□ -0.33
SPTB-208ENST00000556626 CNTLNQ9NXG0 1405 aa13□□□□□ -0.33
SPTB-208ENST00000556626 WWC1Q8IX03 1113 aa13□□□□□ -0.33
SPTB-208ENST00000556626 CDC45O75419 566 aa13□□□□□ -0.33
SPTB-208ENST00000556626 CCDC112Q8NEF3 446 aa13□□□□□ -0.33
SPTB-208ENST00000556626 CCDC192P0DO97 292 aa13□□□□□ -0.33
SPTB-208ENST00000556626 ERLIN1O75477 346 aa12.99□□□□□ -0.33
SPTB-208ENST00000556626 IQCEQ6IPM2 695 aa12.99□□□□□ -0.33
SPTB-208ENST00000556626 NOL10Q9BSC4 688 aaKnown RBP12.99□□□□□ -0.33
SPTB-208ENST00000556626 GRPEL1Q9HAV7 217 aa12.99□□□□□ -0.33
SPTB-208ENST00000556626 ZMYND15Q9H091 742 aa12.99□□□□□ -0.33
SPTB-208ENST00000556626 TOP2AP11388 1531 aaKnown RBP12.99□□□□□ -0.33
SPTB-208ENST00000556626 SPC24Q8NBT2 197 aa12.99□□□□□ -0.33
SPTB-208ENST00000556626 XBP1P17861 261 aa12.98□□□□□ -0.33
SPTB-208ENST00000556626 CCDC43Q96MW1 224 aaKnown RBP12.98□□□□□ -0.33
SPTB-208ENST00000556626 GGT6Q6P531 493 aa12.97□□□□□ -0.33
SPTB-208ENST00000556626 API5Q9BZZ5 524 aaKnown RBP12.97□□□□□ -0.33
SPTB-208ENST00000556626 FILIP1LQ4L180 1135 aa12.97□□□□□ -0.33
SPTB-208ENST00000556626 LNPKQ9C0E8 428 aa12.97□□□□□ -0.33
SPTB-208ENST00000556626 EVC2Q86UK5 1308 aa12.97□□□□□ -0.33
SPTB-208ENST00000556626 SKIDA1Q1XH10 827 aa12.97□□□□□ -0.33
SPTB-208ENST00000556626 RALYLQ86SE5 291 aaKnown RBP12.97□□□□□ -0.33
SPTB-208ENST00000556626 RABEP1Q15276 862 aa12.96□□□□□ -0.33
SPTB-208ENST00000556626 C1orf141Q5JVX7 400 aa12.96□□□□□ -0.33
SPTB-208ENST00000556626 TXLNBQ8N3L3 684 aa12.96□□□□□ -0.33
SPTB-208ENST00000556626 GTF2E1P29083 439 aaPredicted RBP12.96□□□□□ -0.33
SPTB-208ENST00000556626 TRIM34Q9BYJ4 488 aa12.96□□□□□ -0.34
SPTB-208ENST00000556626 LUC7LQ9NQ29 371 aaKnown RBP12.96□□□□□ -0.34
SPTB-208ENST00000556626 ELL2O00472 640 aaPredicted RBP12.95□□□□□ -0.34
SPTB-208ENST00000556626 PRPF40AO75400 957 aaKnown RBP12.95□□□□□ -0.34
SPTB-208ENST00000556626 FOSBP53539 338 aa12.95□□□□□ -0.34
SPTB-208ENST00000556626 HSP90AB4PQ58FF6 505 aa12.95□□□□□ -0.34
SPTB-208ENST00000556626 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.95□□□□□ -0.342e-6■■■■■ 157.1
SPTB-208ENST00000556626 CWC22Q9HCG8 908 aaKnown RBP12.95□□□□□ -0.34
SPTB-208ENST00000556626 ESPNB1AK53 854 aa12.95□□□□□ -0.34
SPTB-208ENST00000556626 ENOX2Q16206 610 aaKnown RBP12.95□□□□□ -0.34
SPTB-208ENST00000556626 CNTROBQ8N137 903 aa12.95□□□□□ -0.34
SPTB-208ENST00000556626 ERICH4A6NGS2 130 aa12.95□□□□□ -0.34
SPTB-208ENST00000556626 PDCL2Q8N4E4 241 aa12.95□□□□□ -0.34
SPTB-208ENST00000556626 G3BP1Q13283 466 aaKnown RBP eCLIP12.95□□□□□ -0.34
SPTB-208ENST00000556626 LRRCC1Q9C099 1032 aa12.94□□□□□ -0.34
SPTB-208ENST00000556626 MAGEC2Q9UBF1 373 aaPredicted RBP12.94□□□□□ -0.34
SPTB-208ENST00000556626 PIP4K2AP48426 406 aaPredicted RBP12.94□□□□□ -0.34
SPTB-208ENST00000556626 NGDNQ8NEJ9 315 aaKnown RBP12.94□□□□□ -0.34
SPTB-208ENST00000556626 RUNDC1Q96C34 613 aa12.94□□□□□ -0.34
SPTB-208ENST00000556626 ZNHIT6Q9NWK9 470 aaKnown RBP12.94□□□□□ -0.34
SPTB-208ENST00000556626 APAF1O14727 1248 aa12.94□□□□□ -0.34
SPTB-208ENST00000556626 CCDC27Q2M243 656 aa12.94□□□□□ -0.34
SPTB-208ENST00000556626 VPS37DQ86XT2 251 aa12.94□□□□□ -0.34
SPTB-208ENST00000556626 COG3Q96JB2 828 aa12.94□□□□□ -0.34
SPTB-208ENST00000556626 SEPT7Q16181 437 aaKnown RBP12.94□□□□□ -0.34
SPTB-208ENST00000556626 ZFYVE27Q5T4F4 411 aa12.94□□□□□ -0.34
SPTB-208ENST00000556626 ZNF396Q96N95 335 aaPredicted RBP12.93□□□□□ -0.34
SPTB-208ENST00000556626 BRD4O60885 1362 aaPredicted RBP12.93□□□□□ -0.34
SPTB-208ENST00000556626 MLECQ14165 292 aa12.93□□□□□ -0.34
SPTB-208ENST00000556626 SUPT6HQ7KZ85 1726 aaKnown RBP12.93□□□□□ -0.34
SPTB-208ENST00000556626 DDX58O95786 925 aaKnown RBP12.93□□□□□ -0.34
SPTB-208ENST00000556626 RAPGEF2Q9Y4G8 1499 aa12.93□□□□□ -0.34
SPTB-208ENST00000556626 RSPH4AQ5TD94 716 aa12.93□□□□□ -0.34
SPTB-208ENST00000556626 DHX16O60231 1041 aaKnown RBP12.92□□□□□ -0.34
SPTB-208ENST00000556626 ANKRD18AQ8IVF6 992 aa12.92□□□□□ -0.34
SPTB-208ENST00000556626 TXLNAP40222 546 aa12.92□□□□□ -0.34
SPTB-208ENST00000556626 GIMAP7Q8NHV1 300 aa12.92□□□□□ -0.34
SPTB-208ENST00000556626 RIPK4P57078 832 aa12.92□□□□□ -0.34
SPTB-208ENST00000556626 TNMDQ9H2S6 317 aa12.92□□□□□ -0.34
SPTB-208ENST00000556626 SERPINC1P01008 464 aa12.91□□□□□ -0.34
SPTB-208ENST00000556626 TEFQ10587 303 aa12.91□□□□□ -0.34
SPTB-208ENST00000556626 PANK1Q8TE04 598 aa12.91□□□□□ -0.34
SPTB-208ENST00000556626 CENPHQ9H3R5 247 aa12.91□□□□□ -0.34
SPTB-208ENST00000556626 CCDC181Q5TID7 509 aa12.91□□□□□ -0.34
SPTB-208ENST00000556626 DDX11Q96FC9 970 aa12.91□□□□□ -0.34
SPTB-208ENST00000556626 RAD21O60216 631 aa12.91□□□□□ -0.34
SPTB-208ENST00000556626 FKBP5Q13451 457 aaPredicted RBP12.91□□□□□ -0.34
SPTB-208ENST00000556626 FIBPO43427 364 aa12.91□□□□□ -0.34
SPTB-208ENST00000556626 LTV1Q96GA3 475 aaPredicted RBP12.91□□□□□ -0.34
SPTB-208ENST00000556626 JMYQ8N9B5 988 aa12.9□□□□□ -0.34
SPTB-208ENST00000556626 FMNL2Q96PY5 1086 aa12.9□□□□□ -0.34
SPTB-208ENST00000556626 HIP1O00291 1037 aa12.9□□□□□ -0.34
SPTB-208ENST00000556626 PPFIBP1Q86W92 1011 aa12.9□□□□□ -0.34
SPTB-208ENST00000556626 TTC5Q8N0Z6 440 aa12.9□□□□□ -0.34
SPTB-208ENST00000556626 NEFHP12036 1026 aa12.9□□□□□ -0.34
SPTB-208ENST00000556626 AKNAQ7Z591 1439 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms