RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-238ENST00000556288 GIGYF2Q6Y7W6 1299 aaKnown RBP7.81□□□□□ -1.16
ATXN3-238ENST00000556288 SULF1Q8IWU6 871 aa7.81□□□□□ -1.16
ATXN3-238ENST00000556288 SSTR3P32745 418 aaPredicted RBP7.8□□□□□ -1.16
ATXN3-238ENST00000556288 PPP4CP60510 307 aa7.8□□□□□ -1.16
ATXN3-238ENST00000556288 RDH13Q8NBN7 331 aa7.8□□□□□ -1.16
ATXN3-238ENST00000556288 GPBP1L1Q9HC44 474 aaPredicted RBP7.8□□□□□ -1.16
ATXN3-238ENST00000556288 HPS5Q9UPZ3 1129 aa7.8□□□□□ -1.16
ATXN3-238ENST00000556288 GAPVD1Q14C86 1478 aa7.8□□□□□ -1.16
ATXN3-238ENST00000556288 BRPF1P55201 1214 aaPredicted RBP7.79□□□□□ -1.16
ATXN3-238ENST00000556288 FAM217BQ9NTX9 383 aaPredicted RBP7.79□□□□□ -1.16
ATXN3-238ENST00000556288 TSR3Q9UJK0 312 aaKnown RBP7.79□□□□□ -1.16
ATXN3-238ENST00000556288 SLC10A3P09131 477 aa7.78□□□□□ -1.16
ATXN3-238ENST00000556288 KCNC4Q03721 635 aa7.78□□□□□ -1.16
ATXN3-238ENST00000556288 ZNF775Q96BV0 537 aaPredicted RBP7.78□□□□□ -1.16
ATXN3-238ENST00000556288 KDM4CQ9H3R0 1056 aa7.78□□□□□ -1.16
ATXN3-238ENST00000556288 GRIN2BQ13224 1484 aa7.77□□□□□ -1.17
ATXN3-238ENST00000556288 SNAPC4Q5SXM2 1469 aa7.77□□□□□ -1.17
ATXN3-238ENST00000556288 ZNF787Q6DD87 383 aa7.77□□□□□ -1.17
ATXN3-238ENST00000556288 NECTIN2Q92692 538 aa7.77□□□□□ -1.17
ATXN3-238ENST00000556288 WBP1LQ9NX94 342 aa7.77□□□□□ -1.17
ATXN3-238ENST00000556288 ABCA10Q8WWZ4 1543 aa7.77□□□□□ -1.17
ATXN3-238ENST00000556288 MS4A1P11836 297 aa7.76□□□□□ -1.17
ATXN3-238ENST00000556288 ABCA5Q8WWZ7 1642 aa7.75□□□□□ -1.17
ATXN3-238ENST00000556288 NRG2O14511 850 aaPredicted RBP7.75□□□□□ -1.17
ATXN3-238ENST00000556288 CD46P15529 392 aa7.75□□□□□ -1.17
ATXN3-238ENST00000556288 CFHP08603 1231 aa7.74□□□□□ -1.17
ATXN3-238ENST00000556288 BEGAINQ9BUH8 593 aa7.74□□□□□ -1.17
ATXN3-238ENST00000556288 GCGRP47871 477 aa7.73□□□□□ -1.17
ATXN3-238ENST00000556288 KMT5BQ4FZB7 885 aa7.73□□□□□ -1.17
ATXN3-238ENST00000556288 NYAP1Q6ZVC0 841 aa7.73□□□□□ -1.17
ATXN3-238ENST00000556288 FAM9AQ8IZU1 332 aaPredicted RBP7.73□□□□□ -1.17
ATXN3-238ENST00000556288 MAGI1Q96QZ7 1491 aaPredicted RBP7.73□□□□□ -1.17
ATXN3-238ENST00000556288 APLP1P51693 650 aa7.72□□□□□ -1.17
ATXN3-238ENST00000556288 NUTM1Q86Y26 1132 aa7.72□□□□□ -1.17
ATXN3-238ENST00000556288 PRR14Q9BWN1 585 aa7.72□□□□□ -1.17
ATXN3-238ENST00000556288 FAM117AQ9C073 453 aa7.72□□□□□ -1.17
ATXN3-238ENST00000556288 KIF27Q86VH2 1401 aa7.71□□□□□ -1.17
ATXN3-238ENST00000556288 SYNJ2O15056 1496 aa7.71□□□□□ -1.18
ATXN3-238ENST00000556288 CYB5RLQ6IPT4 315 aa7.71□□□□□ -1.18
ATXN3-238ENST00000556288 IL27Q8NEV9 243 aa7.71□□□□□ -1.18
ATXN3-238ENST00000556288 RIMBP3CA6NJZ7 1639 aa7.7□□□□□ -1.18
ATXN3-238ENST00000556288 RIMBP3BA6NNM3 1639 aa7.7□□□□□ -1.18
ATXN3-238ENST00000556288 RIMBP3Q9UFD9 1639 aa7.7□□□□□ -1.18
ATXN3-238ENST00000556288 KDM4AO75164 1064 aa7.7□□□□□ -1.18
ATXN3-238ENST00000556288 DDRGK1Q96HY6 314 aa7.7□□□□□ -1.18
ATXN3-238ENST00000556288 TTBK1Q5TCY1 1321 aaPredicted RBP7.7□□□□□ -1.18
ATXN3-238ENST00000556288 ERICH3Q5RHP9 1530 aa7.69□□□□□ -1.18
ATXN3-238ENST00000556288 RUSC2Q8N2Y8 1516 aa7.69□□□□□ -1.18
ATXN3-238ENST00000556288 ACTN4O43707 911 aaKnown RBP7.69□□□□□ -1.18
ATXN3-238ENST00000556288 ADAMTS12P58397 1594 aa7.68□□□□□ -1.18
ATXN3-238ENST00000556288 PRKD2Q9BZL6 878 aa7.68□□□□□ -1.18
ATXN3-238ENST00000556288 FHAD1B1AJZ9 1412 aa7.68□□□□□ -1.18
ATXN3-238ENST00000556288 CUL7Q14999 1698 aa7.67□□□□□ -1.18
ATXN3-238ENST00000556288 USP46P62068 366 aa7.67□□□□□ -1.18
ATXN3-238ENST00000556288 FUT2Q10981 343 aa7.67□□□□□ -1.18
ATXN3-238ENST00000556288 DIXDC1Q155Q3 683 aa7.67□□□□□ -1.18
ATXN3-238ENST00000556288 GRIPAP1Q4V328 841 aa7.67□□□□□ -1.18
ATXN3-238ENST00000556288 SPIRE2Q8WWL2 714 aa7.67□□□□□ -1.18
ATXN3-238ENST00000556288 TBC1D2Q9BYX2 928 aa7.67□□□□□ -1.18
ATXN3-238ENST00000556288 PCDHB3Q9Y5E6 796 aa7.67□□□□□ -1.18
ATXN3-238ENST00000556288 GRIN2AQ12879 1464 aa7.67□□□□□ -1.18
ATXN3-238ENST00000556288 PLEKHG3A1L390 1219 aa7.66□□□□□ -1.18
ATXN3-238ENST00000556288 ATP6V1AP38606 617 aa7.66□□□□□ -1.18
ATXN3-238ENST00000556288 PUS10Q3MIT2 529 aaKnown RBP7.66□□□□□ -1.18
ATXN3-238ENST00000556288 IGF1RP08069 1367 aa7.66□□□□□ -1.18
ATXN3-238ENST00000556288 ARHGEF11O15085 1522 aa7.65□□□□□ -1.18
ATXN3-238ENST00000556288 RANGAP1P46060 587 aaPredicted RBP7.65□□□□□ -1.18
ATXN3-238ENST00000556288 COPS2P61201 443 aa7.65□□□□□ -1.18
ATXN3-238ENST00000556288 CEP170Q5SW79 1584 aa7.65□□□□□ -1.18
ATXN3-238ENST00000556288 CARMIL1Q5VZK9 1371 aa7.65□□□□□ -1.18
ATXN3-238ENST00000556288 RSPH6AQ9H0K4 717 aa7.65□□□□□ -1.18
ATXN3-238ENST00000556288 HOXA2O43364 376 aa7.64□□□□□ -1.19
ATXN3-238ENST00000556288 BLOC1S3Q6QNY0 202 aa7.64□□□□□ -1.19
ATXN3-238ENST00000556288 MOXD2PA6NHM9 499 aa7.63□□□□□ -1.19
ATXN3-238ENST00000556288 NDUFV2P19404 249 aa7.63□□□□□ -1.19
ATXN3-238ENST00000556288 MYSM1Q5VVJ2 828 aa7.63□□□□□ -1.19
ATXN3-238ENST00000556288 MTRQ99707 1265 aa7.63□□□□□ -1.19
ATXN3-238ENST00000556288 POLR3EQ9NVU0 708 aa7.63□□□□□ -1.19
ATXN3-238ENST00000556288 ATP1B4Q9UN42 357 aaPredicted RBP7.63□□□□□ -1.19
ATXN3-238ENST00000556288 CLASP1Q7Z460 1538 aa7.62□□□□□ -1.19
ATXN3-238ENST00000556288 NR1I2O75469 434 aa7.62□□□□□ -1.19
ATXN3-238ENST00000556288 MORN1Q5T089 497 aa7.62□□□□□ -1.19
ATXN3-238ENST00000556288 RIC3Q7Z5B4 369 aa7.62□□□□□ -1.19
ATXN3-238ENST00000556288 HLA-CQ95604 372 aa7.62□□□□□ -1.19
ATXN3-238ENST00000556288 V9GY48 417 aaPredicted RBP7.62□□□□□ -1.19
ATXN3-238ENST00000556288 CTTNBP2Q8WZ74 1663 aa7.61□□□□□ -1.19
ATXN3-238ENST00000556288 FDX1P10109 184 aa7.61□□□□□ -1.19
ATXN3-238ENST00000556288 GUCA2AQ02747 115 aa7.61□□□□□ -1.19
ATXN3-238ENST00000556288 TJAP1Q5JTD0 557 aa7.61□□□□□ -1.19
ATXN3-238ENST00000556288 SCUBE3Q8IX30 993 aa7.61□□□□□ -1.19
ATXN3-238ENST00000556288 IL21Q9HBE4 155 aa7.61□□□□□ -1.19
ATXN3-238ENST00000556288 SLC27A5Q9Y2P5 690 aa7.61□□□□□ -1.19
ATXN3-238ENST00000556288 SKIV2LQ15477 1246 aaKnown RBP7.6□□□□□ -1.19
ATXN3-238ENST00000556288 SH3D19Q5HYK7 790 aa7.6□□□□□ -1.19
ATXN3-238ENST00000556288 RSBN1LQ6PCB5 846 aaPredicted RBP7.6□□□□□ -1.19
ATXN3-238ENST00000556288 ZNF516Q92618 1163 aa7.6□□□□□ -1.19
ATXN3-238ENST00000556288 PRG4Q92954 1404 aaPredicted RBP7.6□□□□□ -1.19
ATXN3-238ENST00000556288 ERCC6L2Q5T890 1561 aa7.59□□□□□ -1.19
ATXN3-238ENST00000556288 SPTLC1O15269 473 aa7.59□□□□□ -1.19
ATXN3-238ENST00000556288 ZPR1O75312 459 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms