RNA–Protein interactions for RNA: ENST00000555370.5

IFT43-210, Transcript of intraflagellar transport 43, humanhuman

TSL 3

Gene IFT43, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-210ENST00000555370 ADGRF5Q8IZF2 1346 aa16.34■□□□□ 0.21
IFT43-210ENST00000555370 STAG3Q9UJ98 1225 aa16.33■□□□□ 0.2
IFT43-210ENST00000555370 EP400Q96L91 3159 aa16.32■□□□□ 0.2
IFT43-210ENST00000555370 RIMS2Q9UQ26 1411 aa16.31■□□□□ 0.2
IFT43-210ENST00000555370 HIRIP3Q9BW71 556 aaPredicted RBP16.31■□□□□ 0.2
IFT43-210ENST00000555370 VGFO15240 615 aaPredicted RBP16.3■□□□□ 0.2
IFT43-210ENST00000555370 NBPF1Q3BBV0 1214 aa16.3■□□□□ 0.2
IFT43-210ENST00000555370 AHDC1Q5TGY3 1603 aaPredicted RBP16.3■□□□□ 0.2
IFT43-210ENST00000555370 BLMP54132 1417 aaPredicted RBP16.29■□□□□ 0.2
IFT43-210ENST00000555370 EID1Q9Y6B2 187 aa16.29■□□□□ 0.2
IFT43-210ENST00000555370 ADGRB1O14514 1584 aa16.29■□□□□ 0.2
IFT43-210ENST00000555370 NRXN3Q9Y4C0 1643 aa16.28■□□□□ 0.2
IFT43-210ENST00000555370 C1QTNF8P60827 252 aa16.28■□□□□ 0.2
IFT43-210ENST00000555370 ARHGEF28Q8N1W1 1705 aaKnown RBP16.28■□□□□ 0.2
IFT43-210ENST00000555370 DIP2AQ14689 1571 aa16.27■□□□□ 0.2
IFT43-210ENST00000555370 DIEXFQ68CQ4 756 aaKnown RBP16.27■□□□□ 0.2
IFT43-210ENST00000555370 SLIT1O75093 1534 aa16.26■□□□□ 0.19
IFT43-210ENST00000555370 SLC26A8Q96RN1 970 aa16.26■□□□□ 0.19
IFT43-210ENST00000555370 TRPC5Q9UL62 973 aaPredicted RBP16.26■□□□□ 0.19
IFT43-210ENST00000555370 ASXL1Q8IXJ9 1541 aa16.25■□□□□ 0.19
IFT43-210ENST00000555370 QRICH2Q9H0J4 1663 aa16.25■□□□□ 0.19
IFT43-210ENST00000555370 BCL9LQ86UU0 1499 aa16.25■□□□□ 0.19
IFT43-210ENST00000555370 ARHGAP23Q9P227 1491 aa16.25■□□□□ 0.19
IFT43-210ENST00000555370 SF3B2Q13435 895 aaKnown RBP16.25■□□□□ 0.19
IFT43-210ENST00000555370 CFAP70Q5T0N1 1121 aa16.25■□□□□ 0.19
IFT43-210ENST00000555370 ZNF784Q8NCA9 323 aaPredicted RBP16.25■□□□□ 0.19
IFT43-210ENST00000555370 C14orf93Q9H972 538 aaKnown RBP16.25■□□□□ 0.19
IFT43-210ENST00000555370 USP21Q9UK80 565 aa16.25■□□□□ 0.19
IFT43-210ENST00000555370 EIF3AQ14152 1382 aaKnown RBP16.25■□□□□ 0.19
IFT43-210ENST00000555370 TMEM2Q9UHN6 1383 aa16.24■□□□□ 0.19
IFT43-210ENST00000555370 ADAMTS2O95450 1211 aa16.23■□□□□ 0.19
IFT43-210ENST00000555370 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.23■□□□□ 0.19
IFT43-210ENST00000555370 NKTRP30414 1462 aaKnown RBP16.22■□□□□ 0.19
IFT43-210ENST00000555370 CCDC7Q96M83 1385 aa16.22■□□□□ 0.19
IFT43-210ENST00000555370 KNDC1Q76NI1 1749 aa16.22■□□□□ 0.19
IFT43-210ENST00000555370 ST20-MTHFSA0A0A6YYL1 179 aa16.21■□□□□ 0.19
IFT43-210ENST00000555370 HDGFP51858 240 aaKnown RBP16.21■□□□□ 0.19
IFT43-210ENST00000555370 DCAF8L1A6NGE4 600 aa16.2■□□□□ 0.18
IFT43-210ENST00000555370 WASHC2AQ641Q2 1341 aa16.19■□□□□ 0.18
IFT43-210ENST00000555370 BRINP3Q76B58 766 aa16.18■□□□□ 0.18
IFT43-210ENST00000555370 C14orf37Q86TY3 774 aa16.18■□□□□ 0.18
IFT43-210ENST00000555370 KIF7Q2M1P5 1343 aa16.18■□□□□ 0.18
IFT43-210ENST00000555370 PLEKHG1Q9ULL1 1385 aa16.16■□□□□ 0.18
IFT43-210ENST00000555370 C11orf95C9JLR9 678 aaPredicted RBP16.16■□□□□ 0.18
IFT43-210ENST00000555370 R3HDM1Q15032 1099 aaKnown RBP16.16■□□□□ 0.18
IFT43-210ENST00000555370 LRRC59Q96AG4 307 aaKnown RBP16.16■□□□□ 0.18
IFT43-210ENST00000555370 ATRNO75882 1429 aa16.16■□□□□ 0.18
IFT43-210ENST00000555370 DDX10Q13206 875 aaKnown RBP16.15■□□□□ 0.18
IFT43-210ENST00000555370 CADPS2Q86UW7 1296 aa16.15■□□□□ 0.18
IFT43-210ENST00000555370 DLC1Q96QB1 1528 aa16.14■□□□□ 0.18
IFT43-210ENST00000555370 YTHDC2Q9H6S0 1430 aaKnown RBP16.14■□□□□ 0.17
IFT43-210ENST00000555370 ATF3P18847 181 aa16.14■□□□□ 0.17
IFT43-210ENST00000555370 TESK2Q96S53 571 aa16.14■□□□□ 0.17
IFT43-210ENST00000555370 PNPLA6Q8IY17 1366 aa16.13■□□□□ 0.17
IFT43-210ENST00000555370 SBNO2Q9Y2G9 1366 aa16.13■□□□□ 0.17
IFT43-210ENST00000555370 TMEM132EQ6IEE7 984 aa16.13■□□□□ 0.17
IFT43-210ENST00000555370 MYOM1P52179 1685 aa16.13■□□□□ 0.17
IFT43-210ENST00000555370 ADAMTS13Q76LX8 1427 aa16.11■□□□□ 0.17
IFT43-210ENST00000555370 FNBP4Q8N3X1 1017 aaPredicted RBP16.11■□□□□ 0.17
IFT43-210ENST00000555370 CENPJQ9HC77 1338 aaPredicted RBP16.11■□□□□ 0.17
IFT43-210ENST00000555370 SLC24A1O60721 1099 aa16.1■□□□□ 0.17
IFT43-210ENST00000555370 TMF1P82094 1093 aa16.1■□□□□ 0.17
IFT43-210ENST00000555370 BCANQ96GW7 911 aa16.1■□□□□ 0.17
IFT43-210ENST00000555370 TRAK1Q9UPV9 953 aa16.1■□□□□ 0.17
IFT43-210ENST00000555370 LRPPRCP42704 1394 aaKnown RBP16.1■□□□□ 0.17
IFT43-210ENST00000555370 BAG6P46379 1132 aa16.08■□□□□ 0.16
IFT43-210ENST00000555370 C19orf44Q9H6X5 657 aa16.08■□□□□ 0.16
IFT43-210ENST00000555370 POLR3GLQ9BT43 218 aa16.07■□□□□ 0.16
IFT43-210ENST00000555370 METP08581 1390 aa16.07■□□□□ 0.16
IFT43-210ENST00000555370 TECPR2O15040 1411 aa16.07■□□□□ 0.16
IFT43-210ENST00000555370 XRN1Q8IZH2 1706 aaKnown RBP16.07■□□□□ 0.16
IFT43-210ENST00000555370 CHD2O14647 1828 aaKnown RBP16.06■□□□□ 0.16
IFT43-210ENST00000555370 NCOA3Q9Y6Q9 1424 aa16.06■□□□□ 0.16
IFT43-210ENST00000555370 CDCA8Q53HL2 280 aa16.06■□□□□ 0.16
IFT43-210ENST00000555370 GJD4Q96KN9 370 aaPredicted RBP16.06■□□□□ 0.16
IFT43-210ENST00000555370 TULP4Q9NRJ4 1543 aa16.05■□□□□ 0.16
IFT43-210ENST00000555370 ABCC11Q96J66 1382 aa16.05■□□□□ 0.16
IFT43-210ENST00000555370 DDX17Q92841 729 aaKnown RBP16.05■□□□□ 0.16
IFT43-210ENST00000555370 STK26Q9P289 416 aa16.04■□□□□ 0.16
IFT43-210ENST00000555370 CEP350Q5VT06 3117 aa16.03■□□□□ 0.16
IFT43-210ENST00000555370 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.03■□□□□ 0.16
IFT43-210ENST00000555370 SLC34A2O95436 690 aa16.03■□□□□ 0.16
IFT43-210ENST00000555370 MIER1Q8N108 512 aa16.03■□□□□ 0.16
IFT43-210ENST00000555370 PPP1R1BQ9UD71 204 aaPredicted RBP16.01■□□□□ 0.15
IFT43-210ENST00000555370 TBX22Q9Y458 520 aa16.01■□□□□ 0.15
IFT43-210ENST00000555370 ADGRB2O60241 1585 aa16■□□□□ 0.15
IFT43-210ENST00000555370 EN1Q05925 392 aaPredicted RBP16■□□□□ 0.15
IFT43-210ENST00000555370 PRAM1Q96QH2 718 aa16■□□□□ 0.15
IFT43-210ENST00000555370 POGKQ9P215 609 aa16■□□□□ 0.15
IFT43-210ENST00000555370 PTPRUQ92729 1446 aa15.99■□□□□ 0.15
IFT43-210ENST00000555370 PIK3R4Q99570 1358 aa15.99■□□□□ 0.15
IFT43-210ENST00000555370 EVC2Q86UK5 1308 aa15.98■□□□□ 0.15
IFT43-210ENST00000555370 ANP32CO43423 234 aa15.98■□□□□ 0.15
IFT43-210ENST00000555370 PTCH1Q13635 1447 aa15.98■□□□□ 0.15
IFT43-210ENST00000555370 SIRT1Q96EB6 747 aa15.98■□□□□ 0.15
IFT43-210ENST00000555370 GIGYF1O75420 1035 aaPredicted RBP15.96■□□□□ 0.15
IFT43-210ENST00000555370 PUS7Q96PZ0 661 aaKnown RBP15.96■□□□□ 0.15
IFT43-210ENST00000555370 PLEKHH1Q9ULM0 1364 aa15.96■□□□□ 0.15
IFT43-210ENST00000555370 NINLQ9Y2I6 1382 aa15.96■□□□□ 0.15
IFT43-210ENST00000555370 CAPN15O75808 1086 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms