RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 PRG4Q92954 1404 aaPredicted RBP9.5□□□□□ -0.89
VPS33B-203ENST00000554264 KIF13AQ9H1H9 1805 aa9.5□□□□□ -0.89
VPS33B-203ENST00000554264 HDGFP51858 240 aaKnown RBP9.5□□□□□ -0.89
VPS33B-203ENST00000554264 PARP9Q8IXQ6 854 aa9.5□□□□□ -0.89
VPS33B-203ENST00000554264 ABCC10Q5T3U5 1492 aa9.49□□□□□ -0.89
VPS33B-203ENST00000554264 FAM69CQ0P6D2 419 aa9.49□□□□□ -0.89
VPS33B-203ENST00000554264 GPCPD1Q9NPB8 672 aa9.49□□□□□ -0.89
VPS33B-203ENST00000554264 TSR3Q9UJK0 312 aaKnown RBP9.49□□□□□ -0.89
VPS33B-203ENST00000554264 RNF40O75150 1001 aa9.48□□□□□ -0.89
VPS33B-203ENST00000554264 CLCN1P35523 988 aa9.48□□□□□ -0.89
VPS33B-203ENST00000554264 SLF2Q8IX21 1173 aa9.48□□□□□ -0.89
VPS33B-203ENST00000554264 MAPKBP1O60336 1514 aa9.47□□□□□ -0.89
VPS33B-203ENST00000554264 TOP2BQ02880 1626 aa9.47□□□□□ -0.89
VPS33B-203ENST00000554264 DDX11L8A8MPP1 907 aa9.47□□□□□ -0.89
VPS33B-203ENST00000554264 HRCP23327 699 aa9.47□□□□□ -0.89
VPS33B-203ENST00000554264 PPP4CP60510 307 aa9.47□□□□□ -0.89
VPS33B-203ENST00000554264 FAM217BQ9NTX9 383 aaPredicted RBP9.47□□□□□ -0.89
VPS33B-203ENST00000554264 BIVM-ERCC5R4GMW8 1640 aa9.46□□□□□ -0.89
VPS33B-203ENST00000554264 TTLL12Q14166 644 aaPredicted RBP9.46□□□□□ -0.9
VPS33B-203ENST00000554264 GIGYF2Q6Y7W6 1299 aaKnown RBP9.46□□□□□ -0.9
VPS33B-203ENST00000554264 GPBP1L1Q9HC44 474 aaPredicted RBP9.46□□□□□ -0.9
VPS33B-203ENST00000554264 SSTR3P32745 418 aaPredicted RBP9.45□□□□□ -0.9
VPS33B-203ENST00000554264 APLP1P51693 650 aa9.45□□□□□ -0.9
VPS33B-203ENST00000554264 HCSTQ9UBK5 93 aa9.45□□□□□ -0.9
VPS33B-203ENST00000554264 MS4A1P11836 297 aa9.44□□□□□ -0.9
VPS33B-203ENST00000554264 CD46P15529 392 aa9.44□□□□□ -0.9
VPS33B-203ENST00000554264 DIP2BQ9P265 1576 aa9.43□□□□□ -0.9
VPS33B-203ENST00000554264 KDM6BO15054 1643 aa9.42□□□□□ -0.9
VPS33B-203ENST00000554264 RDH13Q8NBN7 331 aa9.42□□□□□ -0.9
VPS33B-203ENST00000554264 RUSC2Q8N2Y8 1516 aa9.41□□□□□ -0.9
VPS33B-203ENST00000554264 CFHP08603 1231 aa9.41□□□□□ -0.9
VPS33B-203ENST00000554264 GCGRP47871 477 aa9.41□□□□□ -0.9
VPS33B-203ENST00000554264 BRPF1P55201 1214 aaPredicted RBP9.41□□□□□ -0.9
VPS33B-203ENST00000554264 SULF1Q8IWU6 871 aa9.41□□□□□ -0.9
VPS33B-203ENST00000554264 KDM4CQ9H3R0 1056 aa9.4□□□□□ -0.9
VPS33B-203ENST00000554264 ADCY10Q96PN6 1610 aa9.4□□□□□ -0.9
VPS33B-203ENST00000554264 SLC4A3P48751 1232 aa9.39□□□□□ -0.91
VPS33B-203ENST00000554264 KIAA0586Q9BVV6 1533 aa9.38□□□□□ -0.91
VPS33B-203ENST00000554264 ACTN4O43707 911 aaKnown RBP9.37□□□□□ -0.91
VPS33B-203ENST00000554264 NEUROD2Q15784 382 aa9.36□□□□□ -0.91
VPS33B-203ENST00000554264 RSPH4AQ5TD94 716 aa9.36□□□□□ -0.91
VPS33B-203ENST00000554264 NYAP1Q6ZVC0 841 aa9.36□□□□□ -0.91
VPS33B-203ENST00000554264 BEGAINQ9BUH8 593 aa9.36□□□□□ -0.91
VPS33B-203ENST00000554264 FAM117AQ9C073 453 aa9.36□□□□□ -0.91
VPS33B-203ENST00000554264 FUT2Q10981 343 aa9.35□□□□□ -0.91
VPS33B-203ENST00000554264 PUS10Q3MIT2 529 aaKnown RBP9.35□□□□□ -0.91
VPS33B-203ENST00000554264 NECTIN2Q92692 538 aa9.35□□□□□ -0.91
VPS33B-203ENST00000554264 PTPRGP23470 1445 aa9.34□□□□□ -0.91
VPS33B-203ENST00000554264 KMT5BQ4FZB7 885 aa9.34□□□□□ -0.91
VPS33B-203ENST00000554264 TJAP1Q5JTD0 557 aa9.34□□□□□ -0.91
VPS33B-203ENST00000554264 SPIRE2Q8WWL2 714 aa9.34□□□□□ -0.91
VPS33B-203ENST00000554264 BLOC1S3Q6QNY0 202 aa9.33□□□□□ -0.92
VPS33B-203ENST00000554264 HLA-CQ95604 372 aa9.33□□□□□ -0.92
VPS33B-203ENST00000554264 TSPOAP1O95153 1857 aa9.32□□□□□ -0.92
VPS33B-203ENST00000554264 ABCC2Q92887 1545 aa9.32□□□□□ -0.92
VPS33B-203ENST00000554264 PLEKHG3A1L390 1219 aa9.32□□□□□ -0.92
VPS33B-203ENST00000554264 KDM4AO75164 1064 aa9.32□□□□□ -0.92
VPS33B-203ENST00000554264 COPS2P61201 443 aa9.32□□□□□ -0.92
VPS33B-203ENST00000554264 ZNF516Q92618 1163 aa9.32□□□□□ -0.92
VPS33B-203ENST00000554264 MTRQ99707 1265 aa9.32□□□□□ -0.92
VPS33B-203ENST00000554264 IGF1RP08069 1367 aa9.32□□□□□ -0.92
VPS33B-203ENST00000554264 PLB1Q6P1J6 1458 aa9.32□□□□□ -0.92
VPS33B-203ENST00000554264 CARMIL2Q6F5E8 1435 aa9.31□□□□□ -0.92
VPS33B-203ENST00000554264 KIF27Q86VH2 1401 aa9.31□□□□□ -0.92
VPS33B-203ENST00000554264 MORN1Q5T089 497 aa9.31□□□□□ -0.92
VPS33B-203ENST00000554264 PCDHB3Q9Y5E6 796 aa9.31□□□□□ -0.92
VPS33B-203ENST00000554264 TNIKQ9UKE5 1360 aa9.31□□□□□ -0.92
VPS33B-203ENST00000554264 CUL7Q14999 1698 aa9.31□□□□□ -0.92
VPS33B-203ENST00000554264 GLI2P10070 1586 aa9.3□□□□□ -0.92
VPS33B-203ENST00000554264 ADGRL1O94910 1474 aa9.3□□□□□ -0.92
VPS33B-203ENST00000554264 ATP6V1AP38606 617 aa9.3□□□□□ -0.92
VPS33B-203ENST00000554264 PRR14Q9BWN1 585 aa9.3□□□□□ -0.92
VPS33B-203ENST00000554264 TBC1D2Q9BYX2 928 aa9.3□□□□□ -0.92
VPS33B-203ENST00000554264 ASXL2Q76L83 1435 aa9.3□□□□□ -0.92
VPS33B-203ENST00000554264 HOXA2O43364 376 aa9.29□□□□□ -0.92
VPS33B-203ENST00000554264 ITGBL1O95965 494 aaPredicted RBP9.29□□□□□ -0.92
VPS33B-203ENST00000554264 NDUFV2P19404 249 aa9.29□□□□□ -0.92
VPS33B-203ENST00000554264 GUCA2AQ02747 115 aa9.29□□□□□ -0.92
VPS33B-203ENST00000554264 NUTM1Q86Y26 1132 aa9.29□□□□□ -0.92
VPS33B-203ENST00000554264 SCUBE3Q8IX30 993 aa9.29□□□□□ -0.92
VPS33B-203ENST00000554264 SLC27A5Q9Y2P5 690 aa9.29□□□□□ -0.92
VPS33B-203ENST00000554264 UHRF1BP1LA0JNW5 1464 aa9.28□□□□□ -0.92
VPS33B-203ENST00000554264 MOXD2PA6NHM9 499 aa9.28□□□□□ -0.92
VPS33B-203ENST00000554264 IL27Q8NEV9 243 aa9.28□□□□□ -0.92
VPS33B-203ENST00000554264 NKX2-3Q8TAU0 364 aa9.28□□□□□ -0.92
VPS33B-203ENST00000554264 TTBK1Q5TCY1 1321 aaPredicted RBP9.28□□□□□ -0.92
VPS33B-203ENST00000554264 TEX14Q8IWB6 1497 aa9.27□□□□□ -0.93
VPS33B-203ENST00000554264 CARMIL1Q5VZK9 1371 aa9.26□□□□□ -0.93
VPS33B-203ENST00000554264 UACAQ9BZF9 1416 aa9.26□□□□□ -0.93
VPS33B-203ENST00000554264 ZEB1P37275 1124 aaPredicted RBP9.26□□□□□ -0.93
VPS33B-203ENST00000554264 USP46P62068 366 aa9.26□□□□□ -0.93
VPS33B-203ENST00000554264 MYSM1Q5VVJ2 828 aa9.26□□□□□ -0.93
VPS33B-203ENST00000554264 IL21Q9HBE4 155 aa9.26□□□□□ -0.93
VPS33B-203ENST00000554264 PCDHGC3Q9UN70 934 aa9.26□□□□□ -0.93
VPS33B-203ENST00000554264 PPRC1Q5VV67 1664 aaKnown RBP9.26□□□□□ -0.93
VPS33B-203ENST00000554264 ZPR1O75312 459 aa9.25□□□□□ -0.93
VPS33B-203ENST00000554264 THAP11Q96EK4 314 aa9.25□□□□□ -0.93
VPS33B-203ENST00000554264 PLA2G2EQ9NZK7 142 aa9.25□□□□□ -0.93
VPS33B-203ENST00000554264 KCNC4Q03721 635 aa9.24□□□□□ -0.93
VPS33B-203ENST00000554264 PCDHB15Q9Y5E8 787 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms