RNA–Protein interactions for RNA: ENST00000554233.1

IFT43-207, Transcript of intraflagellar transport 43, humanhuman

TSL 3

Gene IFT43, Length 635 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-207ENST00000554233 MAP2K5Q13163 448 aa8.06□□□□□ -1.12
IFT43-207ENST00000554233 GAPVD1Q14C86 1478 aa8.06□□□□□ -1.12
IFT43-207ENST00000554233 ERICH3Q5RHP9 1530 aa8.05□□□□□ -1.12
IFT43-207ENST00000554233 NR1I2O75469 434 aa8.05□□□□□ -1.12
IFT43-207ENST00000554233 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.05□□□□□ -1.12
IFT43-207ENST00000554233 CLASP1Q7Z460 1538 aa8.04□□□□□ -1.12
IFT43-207ENST00000554233 TDRD9Q8NDG6 1382 aaKnown RBP8.04□□□□□ -1.12
IFT43-207ENST00000554233 ADAMTS12P58397 1594 aa8.03□□□□□ -1.12
IFT43-207ENST00000554233 SYNJ2O15056 1496 aa8.03□□□□□ -1.12
IFT43-207ENST00000554233 SNAPC4Q5SXM2 1469 aa8.03□□□□□ -1.12
IFT43-207ENST00000554233 IRF6O14896 467 aa8.03□□□□□ -1.12
IFT43-207ENST00000554233 S1PR4O95977 384 aa8.03□□□□□ -1.12
IFT43-207ENST00000554233 SULF1Q8IWU6 871 aa8.03□□□□□ -1.12
IFT43-207ENST00000554233 SCUBE3Q8IX30 993 aa8.03□□□□□ -1.12
IFT43-207ENST00000554233 TMUB1Q9BVT8 246 aa8.03□□□□□ -1.12
IFT43-207ENST00000554233 MINK1Q8N4C8 1332 aaPredicted RBP8.03□□□□□ -1.12
IFT43-207ENST00000554233 RNF223E7ERA6 249 aa8.02□□□□□ -1.13
IFT43-207ENST00000554233 PPEF1O14829 653 aaPredicted RBP8.02□□□□□ -1.13
IFT43-207ENST00000554233 FUT2Q10981 343 aa8.02□□□□□ -1.13
IFT43-207ENST00000554233 LMOD2Q6P5Q4 547 aa8.02□□□□□ -1.13
IFT43-207ENST00000554233 RIMBP3CA6NJZ7 1639 aa8.02□□□□□ -1.13
IFT43-207ENST00000554233 RIMBP3BA6NNM3 1639 aa8.02□□□□□ -1.13
IFT43-207ENST00000554233 RIMBP3Q9UFD9 1639 aa8.02□□□□□ -1.13
IFT43-207ENST00000554233 ADH1BP00325 375 aa8.01□□□□□ -1.13
IFT43-207ENST00000554233 GCGRP47871 477 aa8.01□□□□□ -1.13
IFT43-207ENST00000554233 CCDC102AQ96A19 550 aa8.01□□□□□ -1.13
IFT43-207ENST00000554233 V9GY48 417 aaPredicted RBP8.01□□□□□ -1.13
IFT43-207ENST00000554233 MDM2Q00987 491 aaPredicted RBP8□□□□□ -1.13
IFT43-207ENST00000554233 CUL7Q14999 1698 aa7.99□□□□□ -1.13
IFT43-207ENST00000554233 GFRA3O60609 400 aa7.99□□□□□ -1.13
IFT43-207ENST00000554233 ATP6V1AP38606 617 aa7.99□□□□□ -1.13
IFT43-207ENST00000554233 MORN1Q5T089 497 aa7.99□□□□□ -1.13
IFT43-207ENST00000554233 Q6ZNB5 142 aa7.99□□□□□ -1.13
IFT43-207ENST00000554233 SLC6A16Q9GZN6 736 aa7.99□□□□□ -1.13
IFT43-207ENST00000554233 SHROOM2Q13796 1616 aa7.99□□□□□ -1.13
IFT43-207ENST00000554233 ARHGEF11O15085 1522 aa7.98□□□□□ -1.13
IFT43-207ENST00000554233 SPSB2Q99619 263 aa7.98□□□□□ -1.13
IFT43-207ENST00000554233 FHAD1B1AJZ9 1412 aa7.97□□□□□ -1.13
IFT43-207ENST00000554233 NUP160Q12769 1436 aa7.97□□□□□ -1.13
IFT43-207ENST00000554233 CD46P15529 392 aa7.97□□□□□ -1.13
IFT43-207ENST00000554233 KRI1Q8N9T8 703 aaKnown RBP7.97□□□□□ -1.13
IFT43-207ENST00000554233 ANKLE1Q8NAG6 615 aa7.97□□□□□ -1.13
IFT43-207ENST00000554233 SLC27A5Q9Y2P5 690 aa7.97□□□□□ -1.13
IFT43-207ENST00000554233 GRIN2AQ12879 1464 aa7.97□□□□□ -1.13
IFT43-207ENST00000554233 SLC19A1P41440 591 aa7.96□□□□□ -1.14
IFT43-207ENST00000554233 EMID1Q96A84 441 aaPredicted RBP7.96□□□□□ -1.14
IFT43-207ENST00000554233 CEP170Q5SW79 1584 aa7.96□□□□□ -1.14
IFT43-207ENST00000554233 FMNL1O95466 1100 aaPredicted RBP7.94□□□□□ -1.14
IFT43-207ENST00000554233 LAPTM4AQ15012 233 aa7.94□□□□□ -1.14
IFT43-207ENST00000554233 GRIPAP1Q4V328 841 aa7.94□□□□□ -1.14
IFT43-207ENST00000554233 THAP11Q96EK4 314 aa7.94□□□□□ -1.14
IFT43-207ENST00000554233 KIF27Q86VH2 1401 aa7.94□□□□□ -1.14
IFT43-207ENST00000554233 PLA2G2CQ5R387 149 aa7.93□□□□□ -1.14
IFT43-207ENST00000554233 LIAT1Q6ZQX7 453 aa7.93□□□□□ -1.14
IFT43-207ENST00000554233 ZC3H15Q8WU90 426 aaKnown RBP7.93□□□□□ -1.14
IFT43-207ENST00000554233 GPCPD1Q9NPB8 672 aa7.93□□□□□ -1.14
IFT43-207ENST00000554233 PDZRN3Q9UPQ7 1066 aa7.93□□□□□ -1.14
IFT43-207ENST00000554233 KDM4AO75164 1064 aa7.92□□□□□ -1.14
IFT43-207ENST00000554233 CLCN1P35523 988 aa7.92□□□□□ -1.14
IFT43-207ENST00000554233 SPRYD7Q5W111 196 aa7.92□□□□□ -1.14
IFT43-207ENST00000554233 RNF19BQ6ZMZ0 732 aa7.92□□□□□ -1.14
IFT43-207ENST00000554233 BARGINQ6ZT62 677 aa7.92□□□□□ -1.14
IFT43-207ENST00000554233 CHMP7Q8WUX9 453 aaPredicted RBP7.92□□□□□ -1.14
IFT43-207ENST00000554233 IGF1RP08069 1367 aa7.92□□□□□ -1.14
IFT43-207ENST00000554233 RUSC2Q8N2Y8 1516 aa7.92□□□□□ -1.14
IFT43-207ENST00000554233 NRG2O14511 850 aaPredicted RBP7.91□□□□□ -1.14
IFT43-207ENST00000554233 ZMYND10O75800 440 aa7.91□□□□□ -1.14
IFT43-207ENST00000554233 BRICD5Q6PL45 260 aa7.91□□□□□ -1.14
IFT43-207ENST00000554233 FAM160A2Q8N612 972 aaPredicted RBP7.91□□□□□ -1.14
IFT43-207ENST00000554233 HLA-CQ95604 372 aa7.91□□□□□ -1.14
IFT43-207ENST00000554233 REPIN1Q9BWE0 567 aaKnown RBP7.91□□□□□ -1.14
IFT43-207ENST00000554233 PRDM9Q9NQV7 894 aa7.91□□□□□ -1.14
IFT43-207ENST00000554233 ARAP1Q96P48 1450 aa7.91□□□□□ -1.14
IFT43-207ENST00000554233 FAM217BQ9NTX9 383 aaPredicted RBP7.9□□□□□ -1.14
IFT43-207ENST00000554233 ZNF697Q5TEC3 545 aa7.89□□□□□ -1.15
IFT43-207ENST00000554233 ZNF598Q86UK7 904 aaKnown RBP7.89□□□□□ -1.15
IFT43-207ENST00000554233 FCF1Q9Y324 198 aaKnown RBP7.89□□□□□ -1.15
IFT43-207ENST00000554233 SALL2Q9Y467 1007 aaPredicted RBP7.89□□□□□ -1.15
IFT43-207ENST00000554233 LCE2BO14633 110 aa7.88□□□□□ -1.15
IFT43-207ENST00000554233 TRIM67Q6ZTA4 783 aa7.88□□□□□ -1.15
IFT43-207ENST00000554233 HOXA2O43364 376 aa7.87□□□□□ -1.15
IFT43-207ENST00000554233 USP46P62068 366 aa7.87□□□□□ -1.15
IFT43-207ENST00000554233 GUCA2AQ02747 115 aa7.87□□□□□ -1.15
IFT43-207ENST00000554233 TTLL12Q14166 644 aaPredicted RBP7.87□□□□□ -1.15
IFT43-207ENST00000554233 Q3C1V9 767 aa7.87□□□□□ -1.15
IFT43-207ENST00000554233 TRAF7Q6Q0C0 670 aa7.87□□□□□ -1.15
IFT43-207ENST00000554233 NUTM1Q86Y26 1132 aa7.87□□□□□ -1.15
IFT43-207ENST00000554233 KIAA0586Q9BVV6 1533 aa7.87□□□□□ -1.15
IFT43-207ENST00000554233 CTTNBP2Q8WZ74 1663 aa7.86□□□□□ -1.15
IFT43-207ENST00000554233 ERCC6L2Q5T890 1561 aa7.86□□□□□ -1.15
IFT43-207ENST00000554233 SSTR3P32745 418 aaPredicted RBP7.86□□□□□ -1.15
IFT43-207ENST00000554233 MSS51Q4VC12 460 aa7.86□□□□□ -1.15
IFT43-207ENST00000554233 BCANQ96GW7 911 aa7.86□□□□□ -1.15
IFT43-207ENST00000554233 TNFRSF10AO00220 468 aa7.85□□□□□ -1.15
IFT43-207ENST00000554233 CARMIL1Q5VZK9 1371 aa7.84□□□□□ -1.15
IFT43-207ENST00000554233 USB1Q9BQ65 265 aaKnown RBP7.84□□□□□ -1.15
IFT43-207ENST00000554233 PRXQ9BXM0 1461 aa7.83□□□□□ -1.16
IFT43-207ENST00000554233 FOXC1Q12948 553 aa7.83□□□□□ -1.16
IFT43-207ENST00000554233 AMHR2Q16671 573 aa7.83□□□□□ -1.16
IFT43-207ENST00000554233 GIGYF2Q6Y7W6 1299 aaKnown RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms