RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 GRIPAP1Q4V328 841 aa10.1□□□□□ -0.79
SYNE2-210ENST00000553455 ACTN4O43707 911 aaKnown RBP10.09□□□□□ -0.79
SYNE2-210ENST00000553455 MORN1Q5T089 497 aa10.09□□□□□ -0.79
SYNE2-210ENST00000553455 ANKRD13DQ6ZTN6 518 aa10.09□□□□□ -0.79
SYNE2-210ENST00000553455 SOWAHBA6NEL2 793 aa10.08□□□□□ -0.8
SYNE2-210ENST00000553455 CFAP99D6REC4 459 aa10.08□□□□□ -0.8
SYNE2-210ENST00000553455 ANKK1Q8NFD2 765 aa10.08□□□□□ -0.8
SYNE2-210ENST00000553455 NECTIN2Q92692 538 aa10.08□□□□□ -0.8
SYNE2-210ENST00000553455 C6orf229H3BNL8 230 aa10.07□□□□□ -0.8
SYNE2-210ENST00000553455 BCAMP50895 628 aa10.07□□□□□ -0.8
SYNE2-210ENST00000553455 CTDSPL2Q05D32 466 aa10.07□□□□□ -0.8
SYNE2-210ENST00000553455 PUS10Q3MIT2 529 aaKnown RBP10.07□□□□□ -0.8
SYNE2-210ENST00000553455 SYMPKQ92797 1274 aaKnown RBP10.07□□□□□ -0.8
SYNE2-210ENST00000553455 GJD4Q96KN9 370 aaPredicted RBP10.07□□□□□ -0.8
SYNE2-210ENST00000553455 GDPD2Q9HCC8 539 aa10.07□□□□□ -0.8
SYNE2-210ENST00000553455 HOMEZQ8IX15 550 aa10.06□□□□□ -0.8
SYNE2-210ENST00000553455 KRTAP3-3Q9BYR6 98 aa10.06□□□□□ -0.8
SYNE2-210ENST00000553455 KRTAP3-2Q9BYR7 98 aa10.06□□□□□ -0.8
SYNE2-210ENST00000553455 HMX1Q9NP08 348 aaPredicted RBP10.06□□□□□ -0.8
SYNE2-210ENST00000553455 SLC27A5Q9Y2P5 690 aa10.06□□□□□ -0.8
SYNE2-210ENST00000553455 TBC1D2BQ9UPU7 963 aa10.05□□□□□ -0.8
SYNE2-210ENST00000553455 HPS5Q9UPZ3 1129 aa10.05□□□□□ -0.8
SYNE2-210ENST00000553455 GOLGA8CPA6NN73 597 aa10.04□□□□□ -0.8
SYNE2-210ENST00000553455 APLP1P51693 650 aa10.04□□□□□ -0.8
SYNE2-210ENST00000553455 HELBQ8NG08 1087 aaPredicted RBP10.03□□□□□ -0.8
SYNE2-210ENST00000553455 WNT2BQ93097 391 aa10.03□□□□□ -0.8
SYNE2-210ENST00000553455 PRR14Q9BWN1 585 aa10.03□□□□□ -0.8
SYNE2-210ENST00000553455 TRIM34Q9BYJ4 488 aa10.03□□□□□ -0.8
SYNE2-210ENST00000553455 ZNF777Q9ULD5 760 aaPredicted RBP10.03□□□□□ -0.8
SYNE2-210ENST00000553455 GPR37L1O60883 481 aa10.02□□□□□ -0.81
SYNE2-210ENST00000553455 PPP4CP60510 307 aa10.02□□□□□ -0.81
SYNE2-210ENST00000553455 RETREG3Q86VR2 466 aa10.02□□□□□ -0.81
SYNE2-210ENST00000553455 PRR7Q8TB68 274 aa10.02□□□□□ -0.81
SYNE2-210ENST00000553455 LRRN4Q8WUT4 740 aa10.02□□□□□ -0.81
SYNE2-210ENST00000553455 STAC3Q96MF2 364 aa10.02□□□□□ -0.81
SYNE2-210ENST00000553455 ARID3AQ99856 593 aa10.02□□□□□ -0.81
SYNE2-210ENST00000553455 TSR3Q9UJK0 312 aaKnown RBP10.02□□□□□ -0.81
SYNE2-210ENST00000553455 RNF19BQ6ZMZ0 732 aa10.01□□□□□ -0.81
SYNE2-210ENST00000553455 CCDC82Q8N4S0 544 aa10.01□□□□□ -0.81
SYNE2-210ENST00000553455 TSC1Q92574 1164 aa10.01□□□□□ -0.81
SYNE2-210ENST00000553455 ABL2P42684 1182 aa10□□□□□ -0.81
SYNE2-210ENST00000553455 Q3C1V9 767 aa10□□□□□ -0.81
SYNE2-210ENST00000553455 BLOC1S3Q6QNY0 202 aa10□□□□□ -0.81
SYNE2-210ENST00000553455 ZNF330Q9Y3S2 320 aaPredicted RBP9.99□□□□□ -0.81
SYNE2-210ENST00000553455 NDUFB9Q9Y6M9 179 aa9.99□□□□□ -0.81
SYNE2-210ENST00000553455 PER1O15534 1290 aaPredicted RBP9.98□□□□□ -0.81
SYNE2-210ENST00000553455 IRF5Q13568 498 aa9.98□□□□□ -0.81
SYNE2-210ENST00000553455 WBP1LQ9NX94 342 aa9.98□□□□□ -0.81
SYNE2-210ENST00000553455 DESI1Q6ICB0 168 aa9.97□□□□□ -0.81
SYNE2-210ENST00000553455 BRICD5Q6PL45 260 aa9.97□□□□□ -0.81
SYNE2-210ENST00000553455 EPS8L1Q8TE68 723 aa9.97□□□□□ -0.81
SYNE2-210ENST00000553455 THAP11Q96EK4 314 aa9.97□□□□□ -0.81
SYNE2-210ENST00000553455 PRM3Q9NNZ6 103 aa9.97□□□□□ -0.81
SYNE2-210ENST00000553455 SALL2Q9Y467 1007 aaPredicted RBP9.97□□□□□ -0.81
SYNE2-210ENST00000553455 PCDHB3Q9Y5E6 796 aa9.97□□□□□ -0.81
SYNE2-210ENST00000553455 THSD4Q6ZMP0 1018 aa9.96□□□□□ -0.82
SYNE2-210ENST00000553455 SCUBE3Q8IX30 993 aa9.96□□□□□ -0.82
SYNE2-210ENST00000553455 POM121CA8CG34 1229 aa9.95□□□□□ -0.82
SYNE2-210ENST00000553455 USB1Q9BQ65 265 aaKnown RBP9.95□□□□□ -0.82
SYNE2-210ENST00000553455 NR1I2O75469 434 aa9.93□□□□□ -0.82
SYNE2-210ENST00000553455 LYPD8Q6UX82 237 aa9.93□□□□□ -0.82
SYNE2-210ENST00000553455 NR6A1Q15406 480 aa9.92□□□□□ -0.82
SYNE2-210ENST00000553455 WWC1Q8IX03 1113 aa9.92□□□□□ -0.82
SYNE2-210ENST00000553455 POTEMA6NI47 508 aa9.91□□□□□ -0.82
SYNE2-210ENST00000553455 FMNL1O95466 1100 aaPredicted RBP9.91□□□□□ -0.82
SYNE2-210ENST00000553455 KCTD12Q96CX2 325 aaKnown RBP9.91□□□□□ -0.82
SYNE2-210ENST00000553455 SERPINA10Q9UK55 444 aa9.9□□□□□ -0.82
SYNE2-210ENST00000553455 ADAMTS19Q8TE59 1207 aa9.89□□□□□ -0.83
SYNE2-210ENST00000553455 GLMNQ92990 594 aa9.89□□□□□ -0.83
SYNE2-210ENST00000553455 CCDC97Q96F63 343 aaPredicted RBP9.89□□□□□ -0.83
SYNE2-210ENST00000553455 F12P00748 615 aaPredicted RBP9.88□□□□□ -0.83
SYNE2-210ENST00000553455 JUNDP17535 347 aa9.88□□□□□ -0.83
SYNE2-210ENST00000553455 COPS2P61201 443 aa9.88□□□□□ -0.83
SYNE2-210ENST00000553455 WASHC4Q2M389 1173 aa9.87□□□□□ -0.83
SYNE2-210ENST00000553455 MSS51Q4VC12 460 aa9.87□□□□□ -0.83
SYNE2-210ENST00000553455 FAM160A2Q8N612 972 aaPredicted RBP9.87□□□□□ -0.83
SYNE2-210ENST00000553455 VAC14Q08AM6 782 aa9.86□□□□□ -0.83
SYNE2-210ENST00000553455 PTPRNQ16849 979 aa9.86□□□□□ -0.83
SYNE2-210ENST00000553455 POTEGQ6S5H5 508 aa9.86□□□□□ -0.83
SYNE2-210ENST00000553455 CDAN1Q8IWY9 1227 aa9.86□□□□□ -0.83
SYNE2-210ENST00000553455 CALR3Q96L12 384 aaKnown RBP9.86□□□□□ -0.83
SYNE2-210ENST00000553455 TLL1O43897 1013 aa9.85□□□□□ -0.83
SYNE2-210ENST00000553455 NYAP1Q6ZVC0 841 aa9.85□□□□□ -0.83
SYNE2-210ENST00000553455 SPSB2Q99619 263 aa9.85□□□□□ -0.83
SYNE2-210ENST00000553455 PRDM9Q9NQV7 894 aa9.85□□□□□ -0.83
SYNE2-210ENST00000553455 MAP10Q9P2G4 905 aa9.85□□□□□ -0.83
SYNE2-210ENST00000553455 DXOO77932 396 aaKnown RBP9.84□□□□□ -0.83
SYNE2-210ENST00000553455 MMP16P51512 607 aa9.83□□□□□ -0.84
SYNE2-210ENST00000553455 MTRQ99707 1265 aa9.83□□□□□ -0.84
SYNE2-210ENST00000553455 ZPR1O75312 459 aa9.82□□□□□ -0.84
SYNE2-210ENST00000553455 HDGFL1Q5TGJ6 251 aa9.82□□□□□ -0.84
SYNE2-210ENST00000553455 ADH1BP00325 375 aa9.81□□□□□ -0.84
SYNE2-210ENST00000553455 PTPN5P54829 565 aa9.81□□□□□ -0.84
SYNE2-210ENST00000553455 ALG2Q9H553 416 aa9.81□□□□□ -0.84
SYNE2-210ENST00000553455 PCDH10Q9P2E7 1040 aa9.81□□□□□ -0.84
SYNE2-210ENST00000553455 CCNYL3P0C7X3 344 aa9.8□□□□□ -0.84
SYNE2-210ENST00000553455 TJAP1Q5JTD0 557 aa9.8□□□□□ -0.84
SYNE2-210ENST00000553455 FKBPLQ9UIM3 349 aa9.8□□□□□ -0.84
SYNE2-210ENST00000553455 ZNF516Q92618 1163 aa9.79□□□□□ -0.84
SYNE2-210ENST00000553455 NUDT12Q9BQG2 462 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms