RNA–Protein interactions for RNA: ENST00000553038.5

ACTR6-213, Transcript of ARP6 actin related protein 6 homolog, humanhuman

TSL 1 (best)

Gene ACTR6, Length 2,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR6-213ENST00000553038 ANKLE2Q86XL3 938 aa19.1■□□□□ 0.65
ACTR6-213ENST00000553038 ZNF142P52746 1687 aaPredicted RBP19.09■□□□□ 0.65
ACTR6-213ENST00000553038 DLC1Q96QB1 1528 aa19.09■□□□□ 0.65
ACTR6-213ENST00000553038 MYOM1P52179 1685 aa19.08■□□□□ 0.65
ACTR6-213ENST00000553038 HNRNPUQ00839 825 aaKnown RBP eCLIP19.08■□□□□ 0.65
ACTR6-213ENST00000553038 TULP4Q9NRJ4 1543 aa19.08■□□□□ 0.65
ACTR6-213ENST00000553038 RALBP1Q15311 655 aa19.08■□□□□ 0.64
ACTR6-213ENST00000553038 SETD1BQ9UPS6 1966 aaKnown RBP19.08■□□□□ 0.64
ACTR6-213ENST00000553038 PLEKHH1Q9ULM0 1364 aa19.07■□□□□ 0.64
ACTR6-213ENST00000553038 SLC12A5Q9H2X9 1139 aa19.05■□□□□ 0.64
ACTR6-213ENST00000553038 TBX22Q9Y458 520 aa19.05■□□□□ 0.64
ACTR6-213ENST00000553038 PARD3Q8TEW0 1356 aa19.05■□□□□ 0.64
ACTR6-213ENST00000553038 MYBBP1AQ9BQG0 1328 aaKnown RBP19.05■□□□□ 0.64
ACTR6-213ENST00000553038 CDK19Q9BWU1 502 aa19.05■□□□□ 0.64
ACTR6-213ENST00000553038 KNDC1Q76NI1 1749 aa19.03■□□□□ 0.64
ACTR6-213ENST00000553038 AMOTL2Q9Y2J4 779 aa19.03■□□□□ 0.64
ACTR6-213ENST00000553038 PUS7Q96PZ0 661 aaKnown RBP19.03■□□□□ 0.64
ACTR6-213ENST00000553038 DIP2AQ14689 1571 aa19.03■□□□□ 0.64
ACTR6-213ENST00000553038 CPS1P31327 1500 aa19.02■□□□□ 0.64
ACTR6-213ENST00000553038 FAM135BQ49AJ0 1406 aa19.02■□□□□ 0.64
ACTR6-213ENST00000553038 MED14O60244 1454 aa19.02■□□□□ 0.63
ACTR6-213ENST00000553038 ATAD2Q6PL18 1390 aa19.02■□□□□ 0.63
ACTR6-213ENST00000553038 TECPR2O15040 1411 aa19.01■□□□□ 0.63
ACTR6-213ENST00000553038 ROBO2Q9HCK4 1378 aa19.01■□□□□ 0.63
ACTR6-213ENST00000553038 PNISRQ8TF01 805 aaKnown RBP19.01■□□□□ 0.63
ACTR6-213ENST00000553038 SIRT1Q96EB6 747 aa19.01■□□□□ 0.63
ACTR6-213ENST00000553038 PTPRUQ92729 1446 aa18.99■□□□□ 0.63
ACTR6-213ENST00000553038 AMER1Q5JTC6 1135 aaPredicted RBP18.99■□□□□ 0.63
ACTR6-213ENST00000553038 BRD4O60885 1362 aaPredicted RBP18.99■□□□□ 0.63
ACTR6-213ENST00000553038 CARD14Q9BXL6 1004 aa18.98■□□□□ 0.63
ACTR6-213ENST00000553038 NSD3Q9BZ95 1437 aa18.98■□□□□ 0.63
ACTR6-213ENST00000553038 WASLO00401 505 aaPredicted RBP18.98■□□□□ 0.63
ACTR6-213ENST00000553038 NCKAP5LQ9HCH0 1330 aa18.98■□□□□ 0.63
ACTR6-213ENST00000553038 NINLQ9Y2I6 1382 aa18.97■□□□□ 0.63
ACTR6-213ENST00000553038 NLRP13Q86W25 1043 aa18.96■□□□□ 0.63
ACTR6-213ENST00000553038 TERF2IPQ9NYB0 399 aa18.96■□□□□ 0.63
ACTR6-213ENST00000553038 ANKRD36BQ8N2N9 1353 aa18.96■□□□□ 0.63
ACTR6-213ENST00000553038 NPHP4O75161 1426 aaPredicted RBP18.96■□□□□ 0.63
ACTR6-213ENST00000553038 HDGFL2Q7Z4V5 671 aaPredicted RBP18.95■□□□□ 0.62
ACTR6-213ENST00000553038 KDM4FA0A1W2PPD8 638 aa18.94■□□□□ 0.62
ACTR6-213ENST00000553038 CABP1Q9NZU7 370 aa18.94■□□□□ 0.62
ACTR6-213ENST00000553038 KCNA6P17658 529 aa18.93■□□□□ 0.62
ACTR6-213ENST00000553038 PIK3R4Q99570 1358 aa18.93■□□□□ 0.62
ACTR6-213ENST00000553038 SENP3-EIF4A1A0A087X0R7 540 aa18.93■□□□□ 0.62
ACTR6-213ENST00000553038 PTCH1Q13635 1447 aa18.92■□□□□ 0.62
ACTR6-213ENST00000553038 CGNL1Q0VF96 1302 aa18.92■□□□□ 0.62
ACTR6-213ENST00000553038 A0A1W2PP64 1363 aa18.91■□□□□ 0.62
ACTR6-213ENST00000553038 NUTM2FA1L443 756 aa18.91■□□□□ 0.62
ACTR6-213ENST00000553038 NUDT16Q96DE0 195 aaKnown RBP18.91■□□□□ 0.62
ACTR6-213ENST00000553038 NPC1L1Q9UHC9 1359 aa18.9■□□□□ 0.62
ACTR6-213ENST00000553038 PPP2R1AP30153 589 aa18.9■□□□□ 0.62
ACTR6-213ENST00000553038 MORC1Q86VD1 984 aa18.9■□□□□ 0.62
ACTR6-213ENST00000553038 ZBED9Q6R2W3 1325 aa18.89■□□□□ 0.61
ACTR6-213ENST00000553038 PPIP5K1Q6PFW1 1433 aa18.89■□□□□ 0.61
ACTR6-213ENST00000553038 HSPA2P54652 639 aa18.89■□□□□ 0.61
ACTR6-213ENST00000553038 XRN1Q8IZH2 1706 aaKnown RBP18.89■□□□□ 0.61
ACTR6-213ENST00000553038 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.89■□□□□ 0.61
ACTR6-213ENST00000553038 TNNT2P45379 298 aaPredicted RBP18.88■□□□□ 0.61
ACTR6-213ENST00000553038 CCDC61Q9Y6R9 512 aa18.87■□□□□ 0.61
ACTR6-213ENST00000553038 ADGRB2O60241 1585 aa18.86■□□□□ 0.61
ACTR6-213ENST00000553038 C14orf37Q86TY3 774 aa18.86■□□□□ 0.61
ACTR6-213ENST00000553038 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.84■□□□□ 0.61
ACTR6-213ENST00000553038 RBM33Q96EV2 1170 aaKnown RBP18.84■□□□□ 0.61
ACTR6-213ENST00000553038 ATP7BP35670 1465 aa18.84■□□□□ 0.61
ACTR6-213ENST00000553038 USP32Q8NFA0 1604 aa18.83■□□□□ 0.61
ACTR6-213ENST00000553038 CHD2O14647 1828 aaKnown RBP18.83■□□□□ 0.61
ACTR6-213ENST00000553038 CD163L1Q9NR16 1453 aa18.83■□□□□ 0.6
ACTR6-213ENST00000553038 PRR36Q9H6K5 1346 aa18.82■□□□□ 0.6
ACTR6-213ENST00000553038 NSD2O96028 1365 aa18.82■□□□□ 0.6
ACTR6-213ENST00000553038 GGNBP2Q9H3C7 697 aa18.82■□□□□ 0.6
ACTR6-213ENST00000553038 SUPT16HQ9Y5B9 1047 aaKnown RBP18.82■□□□□ 0.6
ACTR6-213ENST00000553038 WDR43Q15061 677 aaKnown RBP eCLIP18.8■□□□□ 0.6
ACTR6-213ENST00000553038 CDC42BPGQ6DT37 1551 aa18.78■□□□□ 0.6
ACTR6-213ENST00000553038 PROSER2Q86WR7 435 aaPredicted RBP18.78■□□□□ 0.6
ACTR6-213ENST00000553038 FYB1O15117 783 aa18.77■□□□□ 0.6
ACTR6-213ENST00000553038 FKBP8Q14318 412 aa18.77■□□□□ 0.6
ACTR6-213ENST00000553038 PMFBP1Q8TBY8 1022 aa18.77■□□□□ 0.6
ACTR6-213ENST00000553038 ZNF692Q9BU19 519 aaPredicted RBP18.77■□□□□ 0.6
ACTR6-213ENST00000553038 ITSN1Q15811 1721 aa18.77■□□□□ 0.6
ACTR6-213ENST00000553038 LMTK3Q96Q04 1460 aa18.77■□□□□ 0.59
ACTR6-213ENST00000553038 ADAMTS8Q9UP79 889 aa18.76■□□□□ 0.59
ACTR6-213ENST00000553038 ACEP12821 1306 aa18.76■□□□□ 0.59
ACTR6-213ENST00000553038 NGDNQ8NEJ9 315 aaKnown RBP18.76■□□□□ 0.59
ACTR6-213ENST00000553038 CPSF1Q10570 1443 aaKnown RBP18.75■□□□□ 0.59
ACTR6-213ENST00000553038 EDC4Q6P2E9 1401 aaKnown RBP18.75■□□□□ 0.59
ACTR6-213ENST00000553038 SALL2Q9Y467 1007 aaPredicted RBP18.75■□□□□ 0.59
ACTR6-213ENST00000553038 KIF20BQ96Q89 1820 aa18.74■□□□□ 0.59
ACTR6-213ENST00000553038 CFAP53Q96M91 514 aa18.74■□□□□ 0.59
ACTR6-213ENST00000553038 NALCNQ8IZF0 1738 aa18.74■□□□□ 0.59
ACTR6-213ENST00000553038 PLEKHG3A1L390 1219 aa18.73■□□□□ 0.59
ACTR6-213ENST00000553038 TOPAZ1Q8N9V7 1692 aa18.73■□□□□ 0.59
ACTR6-213ENST00000553038 NWD1Q149M9 1564 aa18.72■□□□□ 0.59
ACTR6-213ENST00000553038 BLMP54132 1417 aaPredicted RBP18.72■□□□□ 0.59
ACTR6-213ENST00000553038 ADGRL3Q9HAR2 1447 aa18.72■□□□□ 0.59
ACTR6-213ENST00000553038 MTHFSP49914 203 aa18.72■□□□□ 0.59
ACTR6-213ENST00000553038 NME9Q86XW9 330 aa18.72■□□□□ 0.59
ACTR6-213ENST00000553038 ANKARQ7Z5J8 1434 aa18.71■□□□□ 0.59
ACTR6-213ENST00000553038 NKTRP30414 1462 aaKnown RBP18.71■□□□□ 0.59
ACTR6-213ENST00000553038 FMN2Q9NZ56 1722 aa18.7■□□□□ 0.58
ACTR6-213ENST00000553038 AKAP12Q02952 1782 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms